RNA–Protein interactions for RNA: ENST00000515895.1

SNORA40.9-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 93 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.9-201ENST00000515895 PIK3R5Q8WYR1 880 aa4.42□□□□□ -1.7
SNORA40.9-201ENST00000515895 SSBP4Q9BWG4 385 aaPredicted RBP4.42□□□□□ -1.7
SNORA40.9-201ENST00000515895 SEPT3Q9UH03 358 aa4.42□□□□□ -1.7
SNORA40.9-201ENST00000515895 TMEM88BA6NKF7 163 aa4.41□□□□□ -1.7
SNORA40.9-201ENST00000515895 UBAP1LF5GYI3 381 aa4.41□□□□□ -1.7
SNORA40.9-201ENST00000515895 H2AFB1P0C5Y9 115 aa4.41□□□□□ -1.7
SNORA40.9-201ENST00000515895 H2AFB2P0C5Z0 115 aa4.41□□□□□ -1.7
SNORA40.9-201ENST00000515895 HOXD8P13378 290 aaPredicted RBP4.41□□□□□ -1.7
SNORA40.9-201ENST00000515895 NOS3P29474 1203 aa4.41□□□□□ -1.7
SNORA40.9-201ENST00000515895 GDF6Q6KF10 455 aaPredicted RBP4.41□□□□□ -1.7
SNORA40.9-201ENST00000515895 NLRP13Q86W25 1043 aa4.41□□□□□ -1.7
SNORA40.9-201ENST00000515895 WFDC12Q8WWY7 111 aa4.41□□□□□ -1.7
SNORA40.9-201ENST00000515895 PLD4Q96BZ4 506 aa4.41□□□□□ -1.7
SNORA40.9-201ENST00000515895 MEGF10Q96KG7 1140 aa4.41□□□□□ -1.7
SNORA40.9-201ENST00000515895 LOC102724428A0A0B4J2F2 783 aa4.4□□□□□ -1.71
SNORA40.9-201ENST00000515895 ZBTB39O15060 712 aa4.4□□□□□ -1.71
SNORA40.9-201ENST00000515895 ALX3O95076 343 aa4.4□□□□□ -1.71
SNORA40.9-201ENST00000515895 SOX18P35713 384 aa4.4□□□□□ -1.71
SNORA40.9-201ENST00000515895 SIK1P57059 783 aa4.4□□□□□ -1.71
SNORA40.9-201ENST00000515895 DTWD1Q8N5C7 304 aa4.4□□□□□ -1.71
SNORA40.9-201ENST00000515895 HELQQ8TDG4 1101 aa4.4□□□□□ -1.71
SNORA40.9-201ENST00000515895 GPR152Q8TDT2 470 aa4.4□□□□□ -1.71
SNORA40.9-201ENST00000515895 TTC9Q92623 222 aa4.4□□□□□ -1.71
SNORA40.9-201ENST00000515895 TRIM33Q9UPN9 1127 aa4.4□□□□□ -1.71
SNORA40.9-201ENST00000515895 FNDC3AQ9Y2H6 1198 aaKnown RBP4.4□□□□□ -1.71
SNORA40.9-201ENST00000515895 GHRHP01286 108 aa4.39□□□□□ -1.71
SNORA40.9-201ENST00000515895 SSFA2P28290 1259 aa4.39□□□□□ -1.71
SNORA40.9-201ENST00000515895 COL13A1Q5TAT6 717 aaPredicted RBP4.39□□□□□ -1.71
SNORA40.9-201ENST00000515895 ERICH6Q7L0X2 663 aa4.39□□□□□ -1.71
SNORA40.9-201ENST00000515895 IL22RA1Q8N6P7 574 aa4.39□□□□□ -1.71
SNORA40.9-201ENST00000515895 RBSNQ9H1K0 784 aa4.39□□□□□ -1.71
SNORA40.9-201ENST00000515895 DLL1O00548 723 aa4.38□□□□□ -1.71
SNORA40.9-201ENST00000515895 SCNN1AP37088 669 aa4.38□□□□□ -1.71
SNORA40.9-201ENST00000515895 ATP11AP98196 1134 aa4.38□□□□□ -1.71
SNORA40.9-201ENST00000515895 ARTNQ5T4W7 220 aa4.38□□□□□ -1.71
SNORA40.9-201ENST00000515895 TTC39BQ5VTQ0 682 aaPredicted RBP4.38□□□□□ -1.71
SNORA40.9-201ENST00000515895 IGF2-ASQ6U949 168 aa4.38□□□□□ -1.71
SNORA40.9-201ENST00000515895 OR13H1Q8NG92 308 aa4.38□□□□□ -1.71
SNORA40.9-201ENST00000515895 GTF3C2Q8WUA4 911 aaPredicted RBP4.38□□□□□ -1.71
SNORA40.9-201ENST00000515895 KRTAP4-8Q9BYQ9 185 aa4.38□□□□□ -1.71
SNORA40.9-201ENST00000515895 ZFP64Q9NPA5 681 aa4.38□□□□□ -1.71
SNORA40.9-201ENST00000515895 CYP2E1P05181 493 aaPredicted RBP4.37□□□□□ -1.71
SNORA40.9-201ENST00000515895 RPLP1P05386 114 aaKnown RBP4.37□□□□□ -1.71
SNORA40.9-201ENST00000515895 HYAL2Q12891 473 aa4.37□□□□□ -1.71
SNORA40.9-201ENST00000515895 SETDB1Q15047 1291 aa4.37□□□□□ -1.71
SNORA40.9-201ENST00000515895 PDE12Q6L8Q7 609 aaKnown RBP4.37□□□□□ -1.71
SNORA40.9-201ENST00000515895 TXNDC11Q6PKC3 985 aa4.37□□□□□ -1.71
SNORA40.9-201ENST00000515895 ADAMTSL4Q6UY14 1074 aa4.37□□□□□ -1.71
SNORA40.9-201ENST00000515895 ATCAYQ86WG3 371 aa4.37□□□□□ -1.71
SNORA40.9-201ENST00000515895 AGGF1Q8N302 714 aaeCLIP4.37□□□□□ -1.71
SNORA40.9-201ENST00000515895 NUDT16Q96DE0 195 aaKnown RBP4.37□□□□□ -1.71
SNORA40.9-201ENST00000515895 LACRTQ9GZZ8 138 aa4.37□□□□□ -1.71
SNORA40.9-201ENST00000515895 ABI2Q9NYB9 513 aaPredicted RBP4.37□□□□□ -1.71
SNORA40.9-201ENST00000515895 F8W735 103 aaPredicted RBP4.36□□□□□ -1.71
SNORA40.9-201ENST00000515895 PCSK2P16519 638 aa4.36□□□□□ -1.71
SNORA40.9-201ENST00000515895 MPSTP25325 297 aa4.36□□□□□ -1.71
SNORA40.9-201ENST00000515895 CDC25BP30305 580 aa4.36□□□□□ -1.71
SNORA40.9-201ENST00000515895 DNM1Q05193 864 aaKnown RBP4.36□□□□□ -1.71
SNORA40.9-201ENST00000515895 NOM1Q5C9Z4 860 aaKnown RBP4.36□□□□□ -1.71
SNORA40.9-201ENST00000515895 CEP135Q66GS9 1140 aa4.36□□□□□ -1.71
SNORA40.9-201ENST00000515895 PHLDB3Q6NSJ2 640 aa4.36□□□□□ -1.71
SNORA40.9-201ENST00000515895 ZNF438Q7Z4V0 828 aa4.36□□□□□ -1.71
SNORA40.9-201ENST00000515895 GALNT11Q8NCW6 608 aa4.36□□□□□ -1.71
SNORA40.9-201ENST00000515895 EDEM1Q92611 657 aa4.36□□□□□ -1.71
SNORA40.9-201ENST00000515895 SPACA7Q96KW9 195 aa4.36□□□□□ -1.71
SNORA40.9-201ENST00000515895 PSMG3-AS1Q96PY0 264 aa4.36□□□□□ -1.71
SNORA40.9-201ENST00000515895 AKTIPQ9H8T0 292 aa4.36□□□□□ -1.71
SNORA40.9-201ENST00000515895 ELP3Q9H9T3 547 aa4.36□□□□□ -1.71
SNORA40.9-201ENST00000515895 MTMR7Q9Y216 660 aa4.36□□□□□ -1.71
SNORA40.9-201ENST00000515895 USTQ9Y2C2 406 aa4.36□□□□□ -1.71
SNORA40.9-201ENST00000515895 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.36□□□□□ -1.71
SNORA40.9-201ENST00000515895 CARNS1A5YM72 827 aa4.35□□□□□ -1.71
SNORA40.9-201ENST00000515895 LINC01387J3KSC0 135 aa4.35□□□□□ -1.71
SNORA40.9-201ENST00000515895 WISP1O95388 367 aa4.35□□□□□ -1.71
SNORA40.9-201ENST00000515895 PDGFAP04085 211 aa4.35□□□□□ -1.71
SNORA40.9-201ENST00000515895 MZF1P28698 734 aaPredicted RBP4.35□□□□□ -1.71
SNORA40.9-201ENST00000515895 EIF1AXP47813 144 aaKnown RBP4.35□□□□□ -1.71
SNORA40.9-201ENST00000515895 MTMR3Q13615 1198 aa4.35□□□□□ -1.71
SNORA40.9-201ENST00000515895 LRP8Q14114 963 aa4.35□□□□□ -1.71
SNORA40.9-201ENST00000515895 B4GALNT3Q6L9W6 998 aa4.35□□□□□ -1.71
SNORA40.9-201ENST00000515895 ALKBH2Q6NS38 261 aa4.35□□□□□ -1.71
SNORA40.9-201ENST00000515895 PRR23CQ6ZRP0 262 aa4.35□□□□□ -1.71
SNORA40.9-201ENST00000515895 CACTIN-AS1Q8N1I8 211 aa4.35□□□□□ -1.71
SNORA40.9-201ENST00000515895 CARD10Q9BWT7 1032 aa4.35□□□□□ -1.71
SNORA40.9-201ENST00000515895 MRPL18Q9H0U6 180 aaKnown RBP4.35□□□□□ -1.71
SNORA40.9-201ENST00000515895 RASSF4Q9H2L5 321 aa4.35□□□□□ -1.71
SNORA40.9-201ENST00000515895 TMEM63CQ9P1W3 806 aa4.35□□□□□ -1.71
SNORA40.9-201ENST00000515895 PPME1Q9Y570 386 aa4.35□□□□□ -1.71
SNORA40.9-201ENST00000515895 A6NHS1 94 aa4.34□□□□□ -1.71
SNORA40.9-201ENST00000515895 HYAL3O43820 417 aaPredicted RBP4.34□□□□□ -1.71
SNORA40.9-201ENST00000515895 SMNDC1O75940 238 aaKnown RBP eCLIP4.34□□□□□ -1.71
SNORA40.9-201ENST00000515895 FAM13AO94988 1023 aa4.34□□□□□ -1.71
SNORA40.9-201ENST00000515895 KIF4AO95239 1232 aa4.34□□□□□ -1.71
SNORA40.9-201ENST00000515895 ACPPP15309 386 aa4.34□□□□□ -1.71
SNORA40.9-201ENST00000515895 NPR3P17342 541 aa4.34□□□□□ -1.71
SNORA40.9-201ENST00000515895 NBPF11Q86T75 865 aa4.34□□□□□ -1.71
SNORA40.9-201ENST00000515895 MAP4K3Q8IVH8 894 aa4.34□□□□□ -1.71
SNORA40.9-201ENST00000515895 DZIP1LQ8IYY4 767 aaKnown RBP4.34□□□□□ -1.71
SNORA40.9-201ENST00000515895 TTC16Q8NEE8 873 aa4.34□□□□□ -1.71
SNORA40.9-201ENST00000515895 DCAF11Q8TEB1 546 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms