RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 CWC27Q6UX04 472 aaKnown RBP15.6■□□□□ 0.09
PVT1-203ENST00000513868 XAGE2Q96GT9 111 aa15.6■□□□□ 0.09
PVT1-203ENST00000513868 NDUFB9Q9Y6M9 179 aa15.6■□□□□ 0.09
PVT1-203ENST00000513868 PLSCR1O15162 318 aa15.59■□□□□ 0.09
PVT1-203ENST00000513868 PDE8BO95263 885 aa15.59■□□□□ 0.09
PVT1-203ENST00000513868 POTEAQ6S8J7 498 aa15.59■□□□□ 0.09
PVT1-203ENST00000513868 SNX21Q969T3 373 aa15.59■□□□□ 0.09
PVT1-203ENST00000513868 ANO2Q9NQ90 1003 aa15.59■□□□□ 0.09
PVT1-203ENST00000513868 DIAPH3Q9NSV4 1193 aa15.59■□□□□ 0.09
PVT1-203ENST00000513868 NYXQ9GZU5 481 aa15.58■□□□□ 0.08
PVT1-203ENST00000513868 LSG1Q9H089 658 aaKnown RBP15.58■□□□□ 0.08
PVT1-203ENST00000513868 SNRKQ9NRH2 765 aa15.58■□□□□ 0.08
PVT1-203ENST00000513868 DAXXQ9UER7 740 aaPredicted RBP15.58■□□□□ 0.08
PVT1-203ENST00000513868 ATP2B3Q16720 1220 aa15.57■□□□□ 0.08
PVT1-203ENST00000513868 FBXO41Q8TF61 875 aa15.57■□□□□ 0.08
PVT1-203ENST00000513868 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.57■□□□□ 0.08
PVT1-203ENST00000513868 FSD1Q9BTV5 496 aa15.57■□□□□ 0.08
PVT1-203ENST00000513868 MROH5Q6ZUA9 1318 aa15.57■□□□□ 0.08
PVT1-203ENST00000513868 RFX7Q2KHR2 1363 aa15.57■□□□□ 0.08
PVT1-203ENST00000513868 HIP1O00291 1037 aa15.57■□□□□ 0.08
PVT1-203ENST00000513868 CD2BP2O95400 341 aaKnown RBP15.57■□□□□ 0.08
PVT1-203ENST00000513868 FGFR2P21802 821 aa15.57■□□□□ 0.08
PVT1-203ENST00000513868 SSFA2P28290 1259 aa15.57■□□□□ 0.08
PVT1-203ENST00000513868 NMIQ13287 307 aaPredicted RBP15.57■□□□□ 0.08
PVT1-203ENST00000513868 NFIXQ14938 502 aa15.57■□□□□ 0.08
PVT1-203ENST00000513868 NBPF5PQ86XG9 351 aaPredicted RBP15.57■□□□□ 0.08
PVT1-203ENST00000513868 RUFY2Q8WXA3 655 aa15.57■□□□□ 0.08
PVT1-203ENST00000513868 IL17RAQ96F46 866 aa15.57■□□□□ 0.08
PVT1-203ENST00000513868 FAM227BQ96M60 508 aa15.57■□□□□ 0.08
PVT1-203ENST00000513868 DNAJC2Q99543 621 aaKnown RBP15.57■□□□□ 0.08
PVT1-203ENST00000513868 TPTE2Q6XPS3 522 aa15.56■□□□□ 0.08
PVT1-203ENST00000513868 PALD1Q9ULE6 856 aa15.56■□□□□ 0.08
PVT1-203ENST00000513868 RAD50Q92878 1312 aa15.56■□□□□ 0.08
PVT1-203ENST00000513868 A0A0D9SFI3 127 aa15.55■□□□□ 0.08
PVT1-203ENST00000513868 APBA3O96018 575 aa15.55■□□□□ 0.08
PVT1-203ENST00000513868 IFIT1P09914 478 aaKnown RBP15.55■□□□□ 0.08
PVT1-203ENST00000513868 GYS1P13807 737 aa15.55■□□□□ 0.08
PVT1-203ENST00000513868 HSPA4P34932 840 aa15.55■□□□□ 0.08
PVT1-203ENST00000513868 RABEP1Q15276 862 aa15.55■□□□□ 0.08
PVT1-203ENST00000513868 DDX46Q7L014 1031 aaKnown RBP15.55■□□□□ 0.08
PVT1-203ENST00000513868 ERICH6Q7L0X2 663 aa15.55■□□□□ 0.08
PVT1-203ENST00000513868 KBTBD3Q8NAB2 608 aa15.55■□□□□ 0.08
PVT1-203ENST00000513868 HELBQ8NG08 1087 aaPredicted RBP15.55■□□□□ 0.08
PVT1-203ENST00000513868 MPHOSPH8Q99549 860 aa15.55■□□□□ 0.08
PVT1-203ENST00000513868 PAG1Q9NWQ8 432 aa15.55■□□□□ 0.08
PVT1-203ENST00000513868 CARMIL3Q8ND23 1372 aa15.55■□□□□ 0.08
PVT1-203ENST00000513868 MED23Q9ULK4 1368 aa15.55■□□□□ 0.08
PVT1-203ENST00000513868 CHGBP05060 677 aa15.54■□□□□ 0.08
PVT1-203ENST00000513868 GTF2E1P29083 439 aaPredicted RBP15.54■□□□□ 0.08
PVT1-203ENST00000513868 SCARF1Q14162 830 aa15.54■□□□□ 0.08
PVT1-203ENST00000513868 CCDC158Q5M9N0 1113 aa15.54■□□□□ 0.08
PVT1-203ENST00000513868 DOCK2Q92608 1830 aa15.54■□□□□ 0.08
PVT1-203ENST00000513868 GOLIM4O00461 696 aa15.54■□□□□ 0.08
PVT1-203ENST00000513868 IGHMBP2P38935 993 aaKnown RBP15.54■□□□□ 0.08
PVT1-203ENST00000513868 ANAPC15P60006 121 aa15.54■□□□□ 0.08
PVT1-203ENST00000513868 PTH1RQ03431 593 aa15.54■□□□□ 0.08
PVT1-203ENST00000513868 PUM3Q15397 648 aaKnown RBP15.54■□□□□ 0.08
PVT1-203ENST00000513868 CCDC24Q8N4L8 307 aa15.54■□□□□ 0.08
PVT1-203ENST00000513868 ZNF512BQ96KM6 892 aaPredicted RBP15.54■□□□□ 0.08
PVT1-203ENST00000513868 CDC5LQ99459 802 aaKnown RBP15.54■□□□□ 0.08
PVT1-203ENST00000513868 TAF5LO75529 589 aa15.53■□□□□ 0.08
PVT1-203ENST00000513868 TM4SF1P30408 202 aa15.53■□□□□ 0.08
PVT1-203ENST00000513868 ZNF827Q17R98 1081 aa15.53■□□□□ 0.08
PVT1-203ENST00000513868 TTC39AQ5SRH9 613 aa15.53■□□□□ 0.08
PVT1-203ENST00000513868 GORABQ5T7V8 394 aa15.53■□□□□ 0.08
PVT1-203ENST00000513868 TICAM2Q86XR7 235 aa15.53■□□□□ 0.08
PVT1-203ENST00000513868 LPIN2Q92539 896 aa15.53■□□□□ 0.08
PVT1-203ENST00000513868 AKT1S1Q96B36 256 aa15.53■□□□□ 0.08
PVT1-203ENST00000513868 NLRP3Q96P20 1036 aa15.53■□□□□ 0.08
PVT1-203ENST00000513868 ANTXR1Q9H6X2 564 aa15.53■□□□□ 0.08
PVT1-203ENST00000513868 SNAP23O00161 211 aa15.52■□□□□ 0.08
PVT1-203ENST00000513868 MCCP23508 829 aa15.52■□□□□ 0.08
PVT1-203ENST00000513868 KIAA1211Q6ZU35 1233 aa15.52■□□□□ 0.08
PVT1-203ENST00000513868 HSCBQ8IWL3 235 aa15.52■□□□□ 0.08
PVT1-203ENST00000513868 CCDC171Q6TFL3 1326 aa15.51■□□□□ 0.07
PVT1-203ENST00000513868 HMGB2P26583 209 aaKnown RBP15.51■□□□□ 0.07
PVT1-203ENST00000513868 CHRNDQ07001 517 aa15.51■□□□□ 0.07
PVT1-203ENST00000513868 ZNF589Q86UQ0 364 aaPredicted RBP15.51■□□□□ 0.07
PVT1-203ENST00000513868 ANKRD18AQ8IVF6 992 aa15.51■□□□□ 0.07
PVT1-203ENST00000513868 CELF1Q92879 486 aaKnown RBP15.51■□□□□ 0.07
PVT1-203ENST00000513868 BSDC1Q9NW68 430 aaPredicted RBP15.51■□□□□ 0.07
PVT1-203ENST00000513868 ANKRD31Q8N7Z5 1873 aa15.51■□□□□ 0.07
PVT1-203ENST00000513868 NRXN2Q9P2S2 1712 aa15.51■□□□□ 0.07
PVT1-203ENST00000513868 ARID4AP29374 1257 aaPredicted RBP15.51■□□□□ 0.07
PVT1-203ENST00000513868 MCAMP43121 646 aa15.51■□□□□ 0.07
PVT1-203ENST00000513868 PHKA1P46020 1223 aa15.51■□□□□ 0.07
PVT1-203ENST00000513868 CCDC102BQ68D86 513 aa15.51■□□□□ 0.07
PVT1-203ENST00000513868 MAP4K1Q92918 833 aa15.51■□□□□ 0.07
PVT1-203ENST00000513868 MYH13Q9UKX3 1938 aa15.5■□□□□ 0.07
PVT1-203ENST00000513868 ZAP70P43403 619 aa15.5■□□□□ 0.07
PVT1-203ENST00000513868 FKBP4Q02790 459 aaKnown RBP eCLIP15.5■□□□□ 0.07
PVT1-203ENST00000513868 NECTIN1Q15223 517 aa15.5■□□□□ 0.07
PVT1-203ENST00000513868 SLFNL1Q499Z3 407 aa15.5■□□□□ 0.07
PVT1-203ENST00000513868 PRR5LQ6MZQ0 368 aa15.5■□□□□ 0.07
PVT1-203ENST00000513868 PI16Q6UXB8 463 aa15.5■□□□□ 0.07
PVT1-203ENST00000513868 RASEFQ8IZ41 740 aa15.5■□□□□ 0.07
PVT1-203ENST00000513868 KCNB2Q92953 911 aa15.5■□□□□ 0.07
PVT1-203ENST00000513868 SEC62Q99442 399 aaKnown RBP15.5■□□□□ 0.07
PVT1-203ENST00000513868 SLC5A1P13866 664 aa15.49■□□□□ 0.07
PVT1-203ENST00000513868 CNBD1Q8NA66 436 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms