RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 EDEM1Q92611 657 aa10.26□□□□□ -0.77
RFC1-213ENST00000512275 RAB3GAP2Q9H2M9 1393 aa10.26□□□□□ -0.77
RFC1-213ENST00000512275 NAIPQ13075 1403 aa10.25□□□□□ -0.77
RFC1-213ENST00000512275 ATP7AQ04656 1500 aa10.25□□□□□ -0.77
RFC1-213ENST00000512275 LORP23490 312 aaPredicted RBP10.25□□□□□ -0.77
RFC1-213ENST00000512275 CTSOP43234 321 aaPredicted RBP10.25□□□□□ -0.77
RFC1-213ENST00000512275 DNM1Q05193 864 aaKnown RBP10.25□□□□□ -0.77
RFC1-213ENST00000512275 GPC6Q9Y625 555 aaPredicted RBP10.25□□□□□ -0.77
RFC1-213ENST00000512275 FRMPD1Q5SYB0 1578 aa10.25□□□□□ -0.77
RFC1-213ENST00000512275 ROCK1Q13464 1354 aa10.25□□□□□ -0.77
RFC1-213ENST00000512275 POGZQ7Z3K3 1410 aa10.24□□□□□ -0.77
RFC1-213ENST00000512275 KIDINS220Q9ULH0 1771 aa10.24□□□□□ -0.77
RFC1-213ENST00000512275 KDM5CP41229 1560 aa10.24□□□□□ -0.77
RFC1-213ENST00000512275 HECW2Q9P2P5 1572 aa10.24□□□□□ -0.77
RFC1-213ENST00000512275 TGFBR3LH3BV60 316 aa10.24□□□□□ -0.77
RFC1-213ENST00000512275 PRPF40AO75400 957 aaKnown RBP10.24□□□□□ -0.77
RFC1-213ENST00000512275 KLRG1Q96E93 195 aa10.24□□□□□ -0.77
RFC1-213ENST00000512275 DMGDHQ9UI17 866 aaKnown RBP10.24□□□□□ -0.77
RFC1-213ENST00000512275 ANKRD30AQ9BXX3 1397 aa10.24□□□□□ -0.77
RFC1-213ENST00000512275 LDHBP07195 334 aaKnown RBP10.23□□□□□ -0.77
RFC1-213ENST00000512275 TSPY4P0CV99 314 aa10.23□□□□□ -0.77
RFC1-213ENST00000512275 TSPY10P0CW01 314 aa10.23□□□□□ -0.77
RFC1-213ENST00000512275 VSIG8P0DPA2 414 aa10.23□□□□□ -0.77
RFC1-213ENST00000512275 ENOX2Q16206 610 aaKnown RBP10.23□□□□□ -0.77
RFC1-213ENST00000512275 NBPF1Q3BBV0 1214 aa10.23□□□□□ -0.77
RFC1-213ENST00000512275 IER5Q5VY09 327 aa10.23□□□□□ -0.77
RFC1-213ENST00000512275 ZSCAN1Q8NBB4 408 aa10.23□□□□□ -0.77
RFC1-213ENST00000512275 RNF217Q8TC41 542 aa10.23□□□□□ -0.77
RFC1-213ENST00000512275 RHPN1Q8TCX5 695 aa10.23□□□□□ -0.77
RFC1-213ENST00000512275 SOS2Q07890 1332 aaPredicted RBP10.23□□□□□ -0.77
RFC1-213ENST00000512275 DENND4BO75064 1496 aaPredicted RBP10.23□□□□□ -0.77
RFC1-213ENST00000512275 ZNF518AQ6AHZ1 1483 aa10.23□□□□□ -0.77
RFC1-213ENST00000512275 ABCA6Q8N139 1617 aa10.22□□□□□ -0.77
RFC1-213ENST00000512275 IGSF3O75054 1194 aa10.22□□□□□ -0.77
RFC1-213ENST00000512275 ATP4AP20648 1035 aa10.22□□□□□ -0.77
RFC1-213ENST00000512275 MAPK8P45983 427 aa10.22□□□□□ -0.77
RFC1-213ENST00000512275 FGD1P98174 961 aa10.22□□□□□ -0.77
RFC1-213ENST00000512275 HIF1AQ16665 826 aa10.22□□□□□ -0.77
RFC1-213ENST00000512275 WDR44Q5JSH3 913 aa10.22□□□□□ -0.77
RFC1-213ENST00000512275 NBPF10Q6P3W6 841 aaKnown RBP10.22□□□□□ -0.77
RFC1-213ENST00000512275 AFAP1Q8N556 730 aa10.22□□□□□ -0.77
RFC1-213ENST00000512275 NIF3L1Q9GZT8 377 aa10.22□□□□□ -0.77
RFC1-213ENST00000512275 POLMQ9NP87 494 aaPredicted RBP10.22□□□□□ -0.77
RFC1-213ENST00000512275 DNMT3LQ9UJW3 386 aa10.22□□□□□ -0.77
RFC1-213ENST00000512275 NCOA1Q15788 1441 aa10.22□□□□□ -0.77
RFC1-213ENST00000512275 MICAL2O94851 1124 aa10.21□□□□□ -0.77
RFC1-213ENST00000512275 LDLRAD1Q5T700 205 aa10.21□□□□□ -0.77
RFC1-213ENST00000512275 GPR152Q8TDT2 470 aa10.21□□□□□ -0.77
RFC1-213ENST00000512275 SUSD3Q96L08 255 aa10.21□□□□□ -0.77
RFC1-213ENST00000512275 SPAG9O60271 1321 aaKnown RBP10.21□□□□□ -0.78
RFC1-213ENST00000512275 KIF15Q9NS87 1388 aa10.21□□□□□ -0.78
RFC1-213ENST00000512275 FAM181BA6NEQ2 426 aa10.2□□□□□ -0.78
RFC1-213ENST00000512275 OPLAHO14841 1288 aa10.2□□□□□ -0.78
RFC1-213ENST00000512275 ZNF280CQ8ND82 737 aa10.2□□□□□ -0.78
RFC1-213ENST00000512275 NUDT16Q96DE0 195 aaKnown RBP10.2□□□□□ -0.78
RFC1-213ENST00000512275 SETDB2Q96T68 719 aa10.2□□□□□ -0.78
RFC1-213ENST00000512275 DUSP9Q99956 384 aaKnown RBP10.2□□□□□ -0.78
RFC1-213ENST00000512275 BCL11AQ9H165 835 aa10.2□□□□□ -0.78
RFC1-213ENST00000512275 PARP2Q9UGN5 583 aa10.2□□□□□ -0.78
RFC1-213ENST00000512275 DUOX2Q9NRD8 1548 aa10.19□□□□□ -0.78
RFC1-213ENST00000512275 PPFIA3O75145 1194 aa10.19□□□□□ -0.78
RFC1-213ENST00000512275 PHKA2P46019 1235 aa10.19□□□□□ -0.78
RFC1-213ENST00000512275 POU4F2Q12837 409 aa10.19□□□□□ -0.78
RFC1-213ENST00000512275 GGNBP2Q9H3C7 697 aa10.19□□□□□ -0.78
RFC1-213ENST00000512275 RNF19AQ9NV58 838 aa10.19□□□□□ -0.78
RFC1-213ENST00000512275 WWC3Q9ULE0 1092 aa10.19□□□□□ -0.78
RFC1-213ENST00000512275 DIP2CQ9Y2E4 1556 aa10.18□□□□□ -0.78
RFC1-213ENST00000512275 ZMYM4Q5VZL5 1548 aa10.18□□□□□ -0.78
RFC1-213ENST00000512275 ANKRD50Q9ULJ7 1429 aa10.18□□□□□ -0.78
RFC1-213ENST00000512275 RAPGEF3O95398 923 aa10.18□□□□□ -0.78
RFC1-213ENST00000512275 TATP17735 454 aaPredicted RBP10.18□□□□□ -0.78
RFC1-213ENST00000512275 TMC4Q7Z404 712 aa10.18□□□□□ -0.78
RFC1-213ENST00000512275 AIDAQ96BJ3 306 aa10.18□□□□□ -0.78
RFC1-213ENST00000512275 CFHR5Q9BXR6 569 aa10.18□□□□□ -0.78
RFC1-213ENST00000512275 BACH2Q9BYV9 841 aa10.18□□□□□ -0.78
RFC1-213ENST00000512275 FAM13BQ9NYF5 915 aa10.18□□□□□ -0.78
RFC1-213ENST00000512275 RTEL1-TNFRSF6BF6WH68 1400 aa10.17□□□□□ -0.78
RFC1-213ENST00000512275 PNMA6FA0A0J9YX94 578 aa10.17□□□□□ -0.78
RFC1-213ENST00000512275 TTLL8A6PVC2 850 aa10.17□□□□□ -0.78
RFC1-213ENST00000512275 RPLP1P05386 114 aaKnown RBP10.17□□□□□ -0.78
RFC1-213ENST00000512275 PCSK2P16519 638 aa10.17□□□□□ -0.78
RFC1-213ENST00000512275 DAB2P98082 770 aa10.17□□□□□ -0.78
RFC1-213ENST00000512275 ATP2B2Q01814 1243 aa10.17□□□□□ -0.78
RFC1-213ENST00000512275 TSNAXIP1Q2TAA8 658 aa10.17□□□□□ -0.78
RFC1-213ENST00000512275 HSH2DQ96JZ2 352 aa10.17□□□□□ -0.78
RFC1-213ENST00000512275 UNC13BO14795 1591 aa10.17□□□□□ -0.78
RFC1-213ENST00000512275 MLH3Q9UHC1 1453 aa10.17□□□□□ -0.78
RFC1-213ENST00000512275 DHX57Q6P158 1386 aaKnown RBP10.16□□□□□ -0.78
RFC1-213ENST00000512275 EIF2AK4Q9P2K8 1649 aaKnown RBP10.16□□□□□ -0.78
RFC1-213ENST00000512275 LOC100996750A0A140TA64 210 aa10.16□□□□□ -0.78
RFC1-213ENST00000512275 INPP5BP32019 993 aa10.16□□□□□ -0.78
RFC1-213ENST00000512275 IDH3AP50213 366 aa10.16□□□□□ -0.78
RFC1-213ENST00000512275 ALG1LQ6GMV1 187 aa10.16□□□□□ -0.78
RFC1-213ENST00000512275 LYSMD3Q7Z3D4 306 aa10.16□□□□□ -0.78
RFC1-213ENST00000512275 FAM161BQ96MY7 647 aa10.16□□□□□ -0.78
RFC1-213ENST00000512275 CSRNP1Q96S65 589 aa10.16□□□□□ -0.78
RFC1-213ENST00000512275 KRTAP4-6Q9BYQ5 205 aa10.16□□□□□ -0.78
RFC1-213ENST00000512275 COL17A1Q9UMD9 1497 aaPredicted RBP10.16□□□□□ -0.78
RFC1-213ENST00000512275 XPCQ01831 940 aaPredicted RBP10.15□□□□□ -0.78
RFC1-213ENST00000512275 ORC1Q13415 861 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms