RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 WASHC2AQ641Q2 1341 aa9.19□□□□□ -0.94
COPS4-209ENST00000511653 CCNYL3P0C7X3 344 aa9.18□□□□□ -0.94
COPS4-209ENST00000511653 PHKG2P15735 406 aa9.18□□□□□ -0.94
COPS4-209ENST00000511653 SSFA2P28290 1259 aa9.18□□□□□ -0.94
COPS4-209ENST00000511653 POLKQ9UBT6 870 aa9.18□□□□□ -0.94
COPS4-209ENST00000511653 PXDNLA1KZ92 1463 aa9.18□□□□□ -0.94
COPS4-209ENST00000511653 KCNH2Q12809 1159 aa9.17□□□□□ -0.94
COPS4-209ENST00000511653 TMOD3Q9NYL9 352 aa9.17□□□□□ -0.94
COPS4-209ENST00000511653 SPG7Q9UQ90 795 aa9.17□□□□□ -0.94
COPS4-209ENST00000511653 TJP1Q07157 1748 aa9.17□□□□□ -0.94
COPS4-209ENST00000511653 EIF4A2Q14240 407 aaKnown RBP9.16□□□□□ -0.94
COPS4-209ENST00000511653 SLC4A9Q96Q91 983 aa9.16□□□□□ -0.94
COPS4-209ENST00000511653 IL21Q9HBE4 155 aa9.16□□□□□ -0.94
COPS4-209ENST00000511653 ATG3Q9NT62 314 aa9.16□□□□□ -0.94
COPS4-209ENST00000511653 ARFGEF1Q9Y6D6 1849 aa9.16□□□□□ -0.94
COPS4-209ENST00000511653 KDM6AO15550 1401 aaPredicted RBP9.16□□□□□ -0.94
COPS4-209ENST00000511653 SCN11AQ9UI33 1791 aa9.16□□□□□ -0.94
COPS4-209ENST00000511653 TNNT2P45379 298 aaPredicted RBP9.16□□□□□ -0.94
COPS4-209ENST00000511653 NYAP1Q6ZVC0 841 aa9.16□□□□□ -0.94
COPS4-209ENST00000511653 IFNL2Q8IZJ0 200 aa9.16□□□□□ -0.94
COPS4-209ENST00000511653 C10orf71Q711Q0 1435 aa9.15□□□□□ -0.94
COPS4-209ENST00000511653 S1PR4O95977 384 aa9.15□□□□□ -0.94
COPS4-209ENST00000511653 MMP10P09238 476 aa9.15□□□□□ -0.94
COPS4-209ENST00000511653 RFX1P22670 979 aa9.15□□□□□ -0.94
COPS4-209ENST00000511653 NR1H3Q13133 447 aa9.15□□□□□ -0.94
COPS4-209ENST00000511653 ADAMTS7Q9UKP4 1686 aa9.15□□□□□ -0.94
COPS4-209ENST00000511653 CCDC24Q8N4L8 307 aa9.14□□□□□ -0.95
COPS4-209ENST00000511653 POLR3GLQ9BT43 218 aa9.14□□□□□ -0.95
COPS4-209ENST00000511653 SLC6A16Q9GZN6 736 aa9.14□□□□□ -0.95
COPS4-209ENST00000511653 ZBBXA8MT70 800 aa9.13□□□□□ -0.95
COPS4-209ENST00000511653 PIK3CDO00329 1044 aa9.13□□□□□ -0.95
COPS4-209ENST00000511653 HMGB2P26583 209 aaKnown RBP9.13□□□□□ -0.95
COPS4-209ENST00000511653 PPP1R12CQ9BZL4 782 aa9.13□□□□□ -0.95
COPS4-209ENST00000511653 PLEKHG2Q9H7P9 1386 aa9.13□□□□□ -0.95
COPS4-209ENST00000511653 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.13□□□□□ -0.95
COPS4-209ENST00000511653 PPEF1O14829 653 aaPredicted RBP9.13□□□□□ -0.95
COPS4-209ENST00000511653 HSPA6P17066 643 aa9.13□□□□□ -0.95
COPS4-209ENST00000511653 TRIM26Q12899 539 aaPredicted RBP9.13□□□□□ -0.95
COPS4-209ENST00000511653 UNC93B1Q9H1C4 597 aa9.13□□□□□ -0.95
COPS4-209ENST00000511653 SBF1O95248 1867 aa9.13□□□□□ -0.95
COPS4-209ENST00000511653 AFDNP55196 1824 aaKnown RBP9.12□□□□□ -0.95
COPS4-209ENST00000511653 PALM3A6NDB9 673 aaPredicted RBP9.12□□□□□ -0.95
COPS4-209ENST00000511653 TBC1D9Q6ZT07 1266 aa9.12□□□□□ -0.95
COPS4-209ENST00000511653 AEBP1Q8IUX7 1158 aa9.12□□□□□ -0.95
COPS4-209ENST00000511653 CNTNAP4Q9C0A0 1308 aa9.11□□□□□ -0.95
COPS4-209ENST00000511653 A0A0G2JLW4 131 aa9.11□□□□□ -0.95
COPS4-209ENST00000511653 GYS1P13807 737 aa9.11□□□□□ -0.95
COPS4-209ENST00000511653 ZNF530Q6P9A1 599 aaPredicted RBP9.11□□□□□ -0.95
COPS4-209ENST00000511653 TFIP11Q9UBB9 837 aaKnown RBP9.11□□□□□ -0.95
COPS4-209ENST00000511653 RTCBQ9Y3I0 505 aaKnown RBP9.11□□□□□ -0.95
COPS4-209ENST00000511653 ERVV-2B6SEH9 535 aa9.1□□□□□ -0.95
COPS4-209ENST00000511653 SEMA3FQ13275 785 aa9.1□□□□□ -0.95
COPS4-209ENST00000511653 TRAPPC3LQ5T215 181 aa9.1□□□□□ -0.95
COPS4-209ENST00000511653 IFFO2Q5TF58 517 aa9.1□□□□□ -0.95
COPS4-209ENST00000511653 DCAF5Q96JK2 942 aa9.1□□□□□ -0.95
COPS4-209ENST00000511653 BCS1LQ9Y276 419 aa9.1□□□□□ -0.95
COPS4-209ENST00000511653 FCF1Q9Y324 198 aaKnown RBP9.1□□□□□ -0.95
COPS4-209ENST00000511653 WDR90Q96KV7 1748 aa9.1□□□□□ -0.95
COPS4-209ENST00000511653 DPEP1P16444 411 aa9.1□□□□□ -0.95
COPS4-209ENST00000511653 RC3H1Q5TC82 1133 aaKnown RBP9.1□□□□□ -0.95
COPS4-209ENST00000511653 SPNS2Q8IVW8 549 aa9.1□□□□□ -0.95
COPS4-209ENST00000511653 RETREG2Q8NC44 543 aa9.1□□□□□ -0.95
COPS4-209ENST00000511653 CCDC88AQ3V6T2 1871 aa9.09□□□□□ -0.95
COPS4-209ENST00000511653 DLEC1Q9Y238 1755 aa9.09□□□□□ -0.95
COPS4-209ENST00000511653 PTCD1O75127 700 aaKnown RBP9.09□□□□□ -0.95
COPS4-209ENST00000511653 HSPA5P11021 654 aaKnown RBP9.09□□□□□ -0.95
COPS4-209ENST00000511653 NLGN1Q8N2Q7 840 aa9.09□□□□□ -0.95
COPS4-209ENST00000511653 PANK3Q9H999 370 aa9.09□□□□□ -0.95
COPS4-209ENST00000511653 SRP68Q9UHB9 627 aaKnown RBP9.09□□□□□ -0.95
COPS4-209ENST00000511653 UBR2Q8IWV8 1755 aa9.09□□□□□ -0.95
COPS4-209ENST00000511653 ZC3H4Q9UPT8 1303 aaKnown RBP9.08□□□□□ -0.96
COPS4-209ENST00000511653 RPS6KA4O75676 772 aa9.08□□□□□ -0.96
COPS4-209ENST00000511653 HSP90AB1P08238 724 aaKnown RBP9.08□□□□□ -0.96
COPS4-209ENST00000511653 KCNA3P22001 575 aa9.08□□□□□ -0.96
COPS4-209ENST00000511653 LMOD1P29536 600 aaPredicted RBP9.08□□□□□ -0.96
COPS4-209ENST00000511653 CABP4P57796 275 aa9.08□□□□□ -0.96
COPS4-209ENST00000511653 TGFB2P61812 414 aa9.08□□□□□ -0.96
COPS4-209ENST00000511653 DDR1Q08345 913 aa9.08□□□□□ -0.96
COPS4-209ENST00000511653 LINC01559Q495D7 138 aa9.08□□□□□ -0.96
COPS4-209ENST00000511653 PLEKHO1Q53GL0 409 aaPredicted RBP9.08□□□□□ -0.96
COPS4-209ENST00000511653 PLA2G2CQ5R387 149 aa9.08□□□□□ -0.96
COPS4-209ENST00000511653 PDXDC2PQ6P474 469 aa9.08□□□□□ -0.96
COPS4-209ENST00000511653 FAM174AQ8TBP5 190 aa9.08□□□□□ -0.96
COPS4-209ENST00000511653 NMRK2Q9NPI5 230 aa9.08□□□□□ -0.96
COPS4-209ENST00000511653 NRXN2Q9P2S2 1712 aa9.08□□□□□ -0.96
COPS4-209ENST00000511653 MRC1P22897 1456 aa9.08□□□□□ -0.96
COPS4-209ENST00000511653 KCPQ6ZWJ8 1503 aa9.08□□□□□ -0.96
COPS4-209ENST00000511653 CARNS1A5YM72 827 aa9.07□□□□□ -0.96
COPS4-209ENST00000511653 RFC4P35249 363 aa9.07□□□□□ -0.96
COPS4-209ENST00000511653 CRKLP46109 303 aaKnown RBP9.07□□□□□ -0.96
COPS4-209ENST00000511653 EIF4G2P78344 907 aaKnown RBP eCLIP9.07□□□□□ -0.96
COPS4-209ENST00000511653 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
COPS4-209ENST00000511653 SH3BP5LQ7L8J4 393 aa9.07□□□□□ -0.96
COPS4-209ENST00000511653 NFATC2IPQ8NCF5 419 aa9.07□□□□□ -0.96
COPS4-209ENST00000511653 BAP1Q92560 729 aa9.07□□□□□ -0.96
COPS4-209ENST00000511653 FOXJ1Q92949 421 aa9.07□□□□□ -0.96
COPS4-209ENST00000511653 CCDC87Q9NVE4 849 aa9.07□□□□□ -0.96
COPS4-209ENST00000511653 USP42Q9H9J4 1324 aaKnown RBP9.07□□□□□ -0.96
COPS4-209ENST00000511653 TNRC6CQ9HCJ0 1690 aaKnown RBP9.07□□□□□ -0.96
COPS4-209ENST00000511653 SOX11P35716 441 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms