RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 NYXQ9GZU5 481 aa9.32□□□□□ -0.92
TRIO-213ENST00000509354 NMRK2Q9NPI5 230 aa9.32□□□□□ -0.92
TRIO-213ENST00000509354 COL4A5P29400 1685 aa9.32□□□□□ -0.92
TRIO-213ENST00000509354 SNED1Q8TER0 1413 aa9.31□□□□□ -0.92
TRIO-213ENST00000509354 KLRG2A4D1S0 409 aaPredicted RBP9.31□□□□□ -0.92
TRIO-213ENST00000509354 NPR1P16066 1061 aa9.31□□□□□ -0.92
TRIO-213ENST00000509354 GTF2E1P29083 439 aaPredicted RBP9.31□□□□□ -0.92
TRIO-213ENST00000509354 BRPF1P55201 1214 aaPredicted RBP9.31□□□□□ -0.92
TRIO-213ENST00000509354 C1QTNF8P60827 252 aa9.31□□□□□ -0.92
TRIO-213ENST00000509354 CALD1Q05682 793 aaKnown RBP9.31□□□□□ -0.92
TRIO-213ENST00000509354 NLRP10Q86W26 655 aa9.31□□□□□ -0.92
TRIO-213ENST00000509354 CNKSR1Q969H4 720 aa9.31□□□□□ -0.92
TRIO-213ENST00000509354 OTUD5Q96G74 571 aa9.31□□□□□ -0.92
TRIO-213ENST00000509354 PDZRN3Q9UPQ7 1066 aa9.31□□□□□ -0.92
TRIO-213ENST00000509354 WDR90Q96KV7 1748 aa9.31□□□□□ -0.92
TRIO-213ENST00000509354 GRXCR2A6NFK2 248 aa9.3□□□□□ -0.92
TRIO-213ENST00000509354 TCERG1O14776 1098 aaKnown RBP9.3□□□□□ -0.92
TRIO-213ENST00000509354 LMNB1P20700 586 aa9.3□□□□□ -0.92
TRIO-213ENST00000509354 CRY2Q49AN0 593 aa9.3□□□□□ -0.92
TRIO-213ENST00000509354 PARP10Q53GL7 1025 aa9.3□□□□□ -0.92
TRIO-213ENST00000509354 C7orf43Q8WVR3 580 aa9.3□□□□□ -0.92
TRIO-213ENST00000509354 MYH16Q9H6N6 1097 aa9.3□□□□□ -0.92
TRIO-213ENST00000509354 PHAXQ9H814 394 aaKnown RBP9.3□□□□□ -0.92
TRIO-213ENST00000509354 DBF4Q9UBU7 674 aaPredicted RBP9.3□□□□□ -0.92
TRIO-213ENST00000509354 FANCIQ9NVI1 1328 aa9.3□□□□□ -0.92
TRIO-213ENST00000509354 ATP5J2-PTCD1G3V325 749 aa9.29□□□□□ -0.92
TRIO-213ENST00000509354 HCLS1P14317 486 aaPredicted RBP9.29□□□□□ -0.92
TRIO-213ENST00000509354 HOXB3P14651 431 aaPredicted RBP9.29□□□□□ -0.92
TRIO-213ENST00000509354 TCIRG1Q13488 830 aa9.29□□□□□ -0.92
TRIO-213ENST00000509354 TPRNQ4KMQ1 711 aa9.29□□□□□ -0.92
TRIO-213ENST00000509354 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.29□□□□□ -0.92
TRIO-213ENST00000509354 EPAS1Q99814 870 aa9.29□□□□□ -0.92
TRIO-213ENST00000509354 UTP14AQ9BVJ6 771 aaKnown RBP9.29□□□□□ -0.92
TRIO-213ENST00000509354 PPP4R2Q9NY27 417 aa9.29□□□□□ -0.92
TRIO-213ENST00000509354 LTBP3Q9NS15 1303 aa9.29□□□□□ -0.92
TRIO-213ENST00000509354 DUOX1Q9NRD9 1551 aa9.29□□□□□ -0.92
TRIO-213ENST00000509354 LTBP1Q14766 1721 aa9.28□□□□□ -0.92
TRIO-213ENST00000509354 CCDC93Q567U6 631 aa9.28□□□□□ -0.92
TRIO-213ENST00000509354 HSP90AB3PQ58FF7 597 aa9.28□□□□□ -0.92
TRIO-213ENST00000509354 PPP1R42Q7Z4L9 355 aa9.28□□□□□ -0.92
TRIO-213ENST00000509354 PLBD2Q8NHP8 589 aa9.28□□□□□ -0.92
TRIO-213ENST00000509354 RPGRQ92834 1020 aaKnown RBP9.28□□□□□ -0.92
TRIO-213ENST00000509354 TAOK3Q9H2K8 898 aa9.28□□□□□ -0.92
TRIO-213ENST00000509354 HYPKQ9NX55 129 aa9.28□□□□□ -0.92
TRIO-213ENST00000509354 PCNTO95613 3336 aa9.28□□□□□ -0.92
TRIO-213ENST00000509354 SCN4AP35499 1836 aa9.27□□□□□ -0.93
TRIO-213ENST00000509354 MLLT3P42568 568 aaPredicted RBP9.27□□□□□ -0.93
TRIO-213ENST00000509354 RARSP54136 660 aaKnown RBP9.27□□□□□ -0.93
TRIO-213ENST00000509354 RTL5Q5HYW3 569 aaPredicted RBP9.27□□□□□ -0.93
TRIO-213ENST00000509354 ANKRD13DQ6ZTN6 518 aa9.27□□□□□ -0.93
TRIO-213ENST00000509354 GPIHBP1Q8IV16 184 aa9.27□□□□□ -0.93
TRIO-213ENST00000509354 DDX12PQ92771 950 aa9.27□□□□□ -0.93
TRIO-213ENST00000509354 FBXW7Q969H0 707 aa9.27□□□□□ -0.93
TRIO-213ENST00000509354 ISCA1Q9BUE6 129 aa9.27□□□□□ -0.93
TRIO-213ENST00000509354 ZNF277Q9NRM2 450 aaPredicted RBP9.27□□□□□ -0.93
TRIO-213ENST00000509354 TRMT112Q9UI30 125 aaKnown RBP9.27□□□□□ -0.93
TRIO-213ENST00000509354 ABCC4O15439 1325 aa9.27□□□□□ -0.93
TRIO-213ENST00000509354 ZC3H4Q9UPT8 1303 aaKnown RBP9.27□□□□□ -0.93
TRIO-213ENST00000509354 A0A1B0GUL6 1792 aa9.27□□□□□ -0.93
TRIO-213ENST00000509354 PPEF1O14829 653 aaPredicted RBP9.26□□□□□ -0.93
TRIO-213ENST00000509354 NUDT7P0C024 238 aa9.26□□□□□ -0.93
TRIO-213ENST00000509354 HOXA10P31260 410 aaPredicted RBP9.26□□□□□ -0.93
TRIO-213ENST00000509354 FKBP4Q02790 459 aaKnown RBP eCLIP9.26□□□□□ -0.93
TRIO-213ENST00000509354 PDE3AQ14432 1141 aa9.26□□□□□ -0.93
TRIO-213ENST00000509354 TWISTNBQ3B726 338 aaPredicted RBP9.26□□□□□ -0.93
TRIO-213ENST00000509354 ARSIQ5FYB1 569 aa9.26□□□□□ -0.93
TRIO-213ENST00000509354 SOGA3Q5TF21 947 aa9.26□□□□□ -0.93
TRIO-213ENST00000509354 CCDC30Q5VVM6 783 aa9.26□□□□□ -0.93
TRIO-213ENST00000509354 G2E3Q7L622 706 aa9.26□□□□□ -0.93
TRIO-213ENST00000509354 FAM89AQ96GI7 184 aa9.26□□□□□ -0.93
TRIO-213ENST00000509354 MYD88Q99836 296 aa9.26□□□□□ -0.93
TRIO-213ENST00000509354 RRAGCQ9HB90 399 aa9.26□□□□□ -0.93
TRIO-213ENST00000509354 KDM2BQ8NHM5 1336 aa9.26□□□□□ -0.93
TRIO-213ENST00000509354 SH3TC1Q8TE82 1336 aa9.26□□□□□ -0.93
TRIO-213ENST00000509354 ALDH1B1P30837 517 aa9.25□□□□□ -0.93
TRIO-213ENST00000509354 EXOSC9Q06265 439 aaKnown RBP9.25□□□□□ -0.93
TRIO-213ENST00000509354 SLC10A5Q5PT55 438 aa9.25□□□□□ -0.93
TRIO-213ENST00000509354 TYW1BQ6NUM6 668 aa9.25□□□□□ -0.93
TRIO-213ENST00000509354 RIC3Q7Z5B4 369 aa9.25□□□□□ -0.93
TRIO-213ENST00000509354 JARID2Q92833 1246 aaPredicted RBP9.25□□□□□ -0.93
TRIO-213ENST00000509354 RBM17Q96I25 401 aaKnown RBP9.25□□□□□ -0.93
TRIO-213ENST00000509354 ZNF541Q9H0D2 1346 aa9.25□□□□□ -0.93
TRIO-213ENST00000509354 SCN9AQ15858 1988 aa9.24□□□□□ -0.93
TRIO-213ENST00000509354 GLTPD2A6NH11 291 aa9.24□□□□□ -0.93
TRIO-213ENST00000509354 HOXB1P14653 301 aaPredicted RBP9.24□□□□□ -0.93
TRIO-213ENST00000509354 AAMPQ13685 434 aa9.24□□□□□ -0.93
TRIO-213ENST00000509354 ALDH1L2Q3SY69 923 aa9.24□□□□□ -0.93
TRIO-213ENST00000509354 NLRP3Q96P20 1036 aa9.24□□□□□ -0.93
TRIO-213ENST00000509354 CRAMP1Q96RY5 1269 aa9.24□□□□□ -0.93
TRIO-213ENST00000509354 MAP3K2Q9Y2U5 619 aa9.24□□□□□ -0.93
TRIO-213ENST00000509354 ADAMTSL1Q8N6G6 1762 aa9.24□□□□□ -0.93
TRIO-213ENST00000509354 PSME4Q14997 1843 aa9.24□□□□□ -0.93
TRIO-213ENST00000509354 DDNO94850 711 aaPredicted RBP9.23□□□□□ -0.93
TRIO-213ENST00000509354 IARSP41252 1262 aaKnown RBP9.23□□□□□ -0.93
TRIO-213ENST00000509354 PPP4R3BQ5MIZ7 849 aa9.23□□□□□ -0.93
TRIO-213ENST00000509354 GPR153Q6NV75 609 aa9.23□□□□□ -0.93
TRIO-213ENST00000509354 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.23□□□□□ -0.93
TRIO-213ENST00000509354 STK31Q9BXU1 1019 aa9.23□□□□□ -0.93
TRIO-213ENST00000509354 ZNF646O15015 1829 aaPredicted RBP9.23□□□□□ -0.93
TRIO-213ENST00000509354 PI4KAP2A4QPH2 592 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms