RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 U3KPZ7 1027 aaPredicted RBP16.67■□□□□ 0.26
TRIM41-204ENST00000508930 PXDNLA1KZ92 1463 aa16.67■□□□□ 0.26
TRIM41-204ENST00000508930 NEO1Q92859 1461 aa16.67■□□□□ 0.26
TRIM41-204ENST00000508930 PTPDC1A2A3K4 754 aa16.67■□□□□ 0.26
TRIM41-204ENST00000508930 ALDH1L1O75891 902 aa16.67■□□□□ 0.26
TRIM41-204ENST00000508930 ISM2Q6H9L7 571 aa16.67■□□□□ 0.26
TRIM41-204ENST00000508930 KLHDC4Q8TBB5 520 aa16.67■□□□□ 0.26
TRIM41-204ENST00000508930 TAF5LO75529 589 aa16.67■□□□□ 0.26
TRIM41-204ENST00000508930 PNMA6AP0CW24 399 aaPredicted RBP16.67■□□□□ 0.26
TRIM41-204ENST00000508930 HNRNPH2P55795 449 aaKnown RBP16.67■□□□□ 0.26
TRIM41-204ENST00000508930 SIRT1Q96EB6 747 aa16.67■□□□□ 0.26
TRIM41-204ENST00000508930 LGR6Q9HBX8 967 aa16.67■□□□□ 0.26
TRIM41-204ENST00000508930 ZNF446Q9NWS9 450 aa16.67■□□□□ 0.26
TRIM41-204ENST00000508930 E4F1Q66K89 784 aaPredicted RBP16.66■□□□□ 0.26
TRIM41-204ENST00000508930 SASH1O94885 1247 aa16.66■□□□□ 0.26
TRIM41-204ENST00000508930 LMOD1P29536 600 aaPredicted RBP16.66■□□□□ 0.26
TRIM41-204ENST00000508930 KDRP35968 1356 aa16.66■□□□□ 0.26
TRIM41-204ENST00000508930 APOBRQ0VD83 1088 aa16.66■□□□□ 0.26
TRIM41-204ENST00000508930 SCRN1Q12765 414 aa16.66■□□□□ 0.26
TRIM41-204ENST00000508930 BICC1Q9H694 974 aaKnown RBP16.66■□□□□ 0.26
TRIM41-204ENST00000508930 NDUFB9Q9Y6M9 179 aa16.66■□□□□ 0.26
TRIM41-204ENST00000508930 DDX58O95786 925 aaKnown RBP16.65■□□□□ 0.26
TRIM41-204ENST00000508930 SERPINC1P01008 464 aa16.65■□□□□ 0.26
TRIM41-204ENST00000508930 SLC3A2P08195 630 aaKnown RBP16.65■□□□□ 0.26
TRIM41-204ENST00000508930 HOXC9P31274 260 aa16.65■□□□□ 0.26
TRIM41-204ENST00000508930 FAM193AP78312 1265 aa16.65■□□□□ 0.26
TRIM41-204ENST00000508930 NEK11Q8NG66 645 aa16.65■□□□□ 0.26
TRIM41-204ENST00000508930 SUCLG2Q96I99 432 aa16.65■□□□□ 0.26
TRIM41-204ENST00000508930 GRM8O00222 908 aa16.65■□□□□ 0.26
TRIM41-204ENST00000508930 MTX1Q13505 466 aa16.65■□□□□ 0.26
TRIM41-204ENST00000508930 LRRN4CLQ8ND94 238 aa16.65■□□□□ 0.26
TRIM41-204ENST00000508930 SLC26A8Q96RN1 970 aa16.65■□□□□ 0.26
TRIM41-204ENST00000508930 NCOA5Q9HCD5 579 aaKnown RBP16.65■□□□□ 0.26
TRIM41-204ENST00000508930 DHX8Q14562 1220 aaKnown RBP16.65■□□□□ 0.26
TRIM41-204ENST00000508930 NAA16Q6N069 864 aaPredicted RBP16.65■□□□□ 0.26
TRIM41-204ENST00000508930 KSR2Q6VAB6 950 aa16.65■□□□□ 0.26
TRIM41-204ENST00000508930 RIC3Q7Z5B4 369 aa16.65■□□□□ 0.26
TRIM41-204ENST00000508930 USP31Q70CQ4 1352 aa16.64■□□□□ 0.26
TRIM41-204ENST00000508930 ROBO2Q9HCK4 1378 aa16.64■□□□□ 0.26
TRIM41-204ENST00000508930 PSDA5PKW4 1024 aaPredicted RBP16.64■□□□□ 0.25
TRIM41-204ENST00000508930 ETF1P62495 437 aaKnown RBP16.64■□□□□ 0.25
TRIM41-204ENST00000508930 ZNF530Q6P9A1 599 aaPredicted RBP16.64■□□□□ 0.25
TRIM41-204ENST00000508930 MPRIPQ6WCQ1 1025 aa16.64■□□□□ 0.25
TRIM41-204ENST00000508930 PLCD3Q8N3E9 789 aa16.64■□□□□ 0.25
TRIM41-204ENST00000508930 ABTB2Q8N961 1025 aa16.64■□□□□ 0.25
TRIM41-204ENST00000508930 CARD6Q9BX69 1037 aa16.64■□□□□ 0.25
TRIM41-204ENST00000508930 TRIM34Q9BYJ4 488 aa16.64■□□□□ 0.25
TRIM41-204ENST00000508930 OSBPL5Q9H0X9 879 aaPredicted RBP16.64■□□□□ 0.25
TRIM41-204ENST00000508930 H2AFXP16104 143 aaPredicted RBP16.64■□□□□ 0.25
TRIM41-204ENST00000508930 ALDH8A1Q9H2A2 487 aaPredicted RBP16.64■□□□□ 0.25
TRIM41-204ENST00000508930 TMX1Q9H3N1 280 aa16.64■□□□□ 0.25
TRIM41-204ENST00000508930 CYP2C19P33261 490 aa16.64■□□□□ 0.25
TRIM41-204ENST00000508930 DPCR1Q3MIW9 517 aa16.64■□□□□ 0.25
TRIM41-204ENST00000508930 SYNE3Q6ZMZ3 975 aa16.64■□□□□ 0.25
TRIM41-204ENST00000508930 POLR3DP05423 398 aaPredicted RBP16.63■□□□□ 0.25
TRIM41-204ENST00000508930 CFAP100Q494V2 611 aa16.63■□□□□ 0.25
TRIM41-204ENST00000508930 ADGRL3Q9HAR2 1447 aa16.63■□□□□ 0.25
TRIM41-204ENST00000508930 SEC62Q99442 399 aaKnown RBP16.63■□□□□ 0.25
TRIM41-204ENST00000508930 LLPHQ9BRT6 129 aaKnown RBP16.63■□□□□ 0.25
TRIM41-204ENST00000508930 TSPYL1Q9H0U9 437 aa16.63■□□□□ 0.25
TRIM41-204ENST00000508930 NRKQ7Z2Y5 1582 aa16.63■□□□□ 0.25
TRIM41-204ENST00000508930 SEC31AO94979 1220 aaKnown RBP16.63■□□□□ 0.25
TRIM41-204ENST00000508930 TUBB4AP04350 444 aa16.63■□□□□ 0.25
TRIM41-204ENST00000508930 NEXNQ0ZGT2 675 aa16.63■□□□□ 0.25
TRIM41-204ENST00000508930 ARMCX5Q6P1M9 558 aa16.63■□□□□ 0.25
TRIM41-204ENST00000508930 L2HGDHQ9H9P8 463 aa16.63■□□□□ 0.25
TRIM41-204ENST00000508930 CEP170BQ9Y4F5 1589 aaPredicted RBP16.62■□□□□ 0.25
TRIM41-204ENST00000508930 TXLNBQ8N3L3 684 aa16.62■□□□□ 0.25
TRIM41-204ENST00000508930 PDILTQ8N807 584 aa16.62■□□□□ 0.25
TRIM41-204ENST00000508930 NSUN7Q8NE18 718 aaKnown RBP16.62■□□□□ 0.25
TRIM41-204ENST00000508930 PCDHA7Q9UN72 937 aa16.62■□□□□ 0.25
TRIM41-204ENST00000508930 FHOD1Q9Y613 1164 aa16.62■□□□□ 0.25
TRIM41-204ENST00000508930 EVCP57679 992 aa16.62■□□□□ 0.25
TRIM41-204ENST00000508930 DDX46Q7L014 1031 aaKnown RBP16.62■□□□□ 0.25
TRIM41-204ENST00000508930 CCDC34Q96HJ3 373 aa16.62■□□□□ 0.25
TRIM41-204ENST00000508930 KIAA1468Q9P260 1216 aa16.62■□□□□ 0.25
TRIM41-204ENST00000508930 RIMS1Q86UR5 1692 aaKnown RBP16.62■□□□□ 0.25
TRIM41-204ENST00000508930 TPM1P09493 284 aa16.62■□□□□ 0.25
TRIM41-204ENST00000508930 HOXB7P09629 217 aa16.62■□□□□ 0.25
TRIM41-204ENST00000508930 CYP21A2P08686 494 aa16.61■□□□□ 0.25
TRIM41-204ENST00000508930 DHX32Q7L7V1 743 aaKnown RBP16.61■□□□□ 0.25
TRIM41-204ENST00000508930 UTP14AQ9BVJ6 771 aaKnown RBP16.61■□□□□ 0.25
TRIM41-204ENST00000508930 TUBGCP6Q96RT7 1819 aa16.61■□□□□ 0.25
TRIM41-204ENST00000508930 PFKFB2O60825 505 aa16.61■□□□□ 0.25
TRIM41-204ENST00000508930 HMGB1P09429 215 aaKnown RBP16.61■□□□□ 0.25
TRIM41-204ENST00000508930 PROSER3Q2NL68 480 aa16.61■□□□□ 0.25
TRIM41-204ENST00000508930 C1orf141Q5JVX7 400 aa16.61■□□□□ 0.25
TRIM41-204ENST00000508930 ATL3Q6DD88 541 aa16.61■□□□□ 0.25
TRIM41-204ENST00000508930 CHST3Q7LGC8 479 aa16.61■□□□□ 0.25
TRIM41-204ENST00000508930 LINS1Q8NG48 757 aa16.61■□□□□ 0.25
TRIM41-204ENST00000508930 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.61■□□□□ 0.25
TRIM41-204ENST00000508930 ADCY9O60503 1353 aa16.61■□□□□ 0.25
TRIM41-204ENST00000508930 PLA2G4AP47712 749 aa16.61■□□□□ 0.25
TRIM41-204ENST00000508930 NDUFA8P51970 172 aa16.61■□□□□ 0.25
TRIM41-204ENST00000508930 FANCCQ00597 558 aa16.61■□□□□ 0.25
TRIM41-204ENST00000508930 OTUD7BQ6GQQ9 843 aa16.61■□□□□ 0.25
TRIM41-204ENST00000508930 SRRTQ9BXP5 876 aaKnown RBP16.61■□□□□ 0.25
TRIM41-204ENST00000508930 ORC3Q9UBD5 711 aaPredicted RBP16.61■□□□□ 0.25
TRIM41-204ENST00000508930 UBASH3AP57075 661 aa16.6■□□□□ 0.25
TRIM41-204ENST00000508930 ITSN1Q15811 1721 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms