RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 NOL7Q9UMY1 257 aaKnown RBP13.18□□□□□ -0.3
SH3RF1-203ENST00000508685 MYH14Q7Z406 1995 aaKnown RBP13.18□□□□□ -0.3
SH3RF1-203ENST00000508685 ERVV-1B6SEH8 477 aa13.18□□□□□ -0.3
SH3RF1-203ENST00000508685 RRP9O43818 475 aaKnown RBP13.18□□□□□ -0.3
SH3RF1-203ENST00000508685 PDIA4P13667 645 aaKnown RBP13.18□□□□□ -0.3
SH3RF1-203ENST00000508685 PTH1RQ03431 593 aa13.18□□□□□ -0.3
SH3RF1-203ENST00000508685 NMIQ13287 307 aaPredicted RBP13.18□□□□□ -0.3
SH3RF1-203ENST00000508685 FAM182BQ5T319 152 aa13.18□□□□□ -0.3
SH3RF1-203ENST00000508685 CCDC125Q86Z20 511 aa13.18□□□□□ -0.3
SH3RF1-203ENST00000508685 DNAJC2Q99543 621 aaKnown RBP13.18□□□□□ -0.3
SH3RF1-203ENST00000508685 PLA2G12BQ9BX93 195 aa13.18□□□□□ -0.3
SH3RF1-203ENST00000508685 A0A0D9SFI3 127 aa13.17□□□□□ -0.3
SH3RF1-203ENST00000508685 OFD1O75665 1012 aa13.17□□□□□ -0.3
SH3RF1-203ENST00000508685 LETM1O95202 739 aaPredicted RBP13.17□□□□□ -0.3
SH3RF1-203ENST00000508685 CSF1RP07333 972 aa13.17□□□□□ -0.3
SH3RF1-203ENST00000508685 KIAA1211Q6ZU35 1233 aa13.17□□□□□ -0.3
SH3RF1-203ENST00000508685 RUFY2Q8WXA3 655 aa13.17□□□□□ -0.3
SH3RF1-203ENST00000508685 GREM2Q9H772 168 aa13.17□□□□□ -0.3
SH3RF1-203ENST00000508685 CDHR2Q9BYE9 1310 aa13.17□□□□□ -0.3
SH3RF1-203ENST00000508685 ZNF609O15014 1411 aa13.17□□□□□ -0.3
SH3RF1-203ENST00000508685 IRS4O14654 1257 aaPredicted RBP13.17□□□□□ -0.3
SH3RF1-203ENST00000508685 ZNF500O60304 480 aaPredicted RBP13.17□□□□□ -0.3
SH3RF1-203ENST00000508685 CIAO1O76071 339 aa13.17□□□□□ -0.3
SH3RF1-203ENST00000508685 CHGBP05060 677 aa13.17□□□□□ -0.3
SH3RF1-203ENST00000508685 GLIPR1L2Q4G1C9 344 aa13.17□□□□□ -0.3
SH3RF1-203ENST00000508685 FAM196AQ6ZSG2 479 aa13.17□□□□□ -0.3
SH3RF1-203ENST00000508685 ZNF34Q8IZ26 560 aa13.17□□□□□ -0.3
SH3RF1-203ENST00000508685 RASEFQ8IZ41 740 aa13.17□□□□□ -0.3
SH3RF1-203ENST00000508685 TTLL11Q8NHH1 800 aa13.17□□□□□ -0.3
SH3RF1-203ENST00000508685 UBE2Q2Q8WVN8 375 aa13.17□□□□□ -0.3
SH3RF1-203ENST00000508685 RREB1Q92766 1687 aa13.16□□□□□ -0.3
SH3RF1-203ENST00000508685 CICQ96RK0 1608 aaPredicted RBP13.16□□□□□ -0.3
SH3RF1-203ENST00000508685 A0A1B0GUL7 405 aa13.16□□□□□ -0.3
SH3RF1-203ENST00000508685 FAM177BA6PVY3 158 aa13.16□□□□□ -0.3
SH3RF1-203ENST00000508685 CTSWP56202 376 aa13.16□□□□□ -0.3
SH3RF1-203ENST00000508685 IFIT5Q13325 482 aaKnown RBP13.16□□□□□ -0.3
SH3RF1-203ENST00000508685 CSPP1Q1MSJ5 1256 aa13.16□□□□□ -0.3
SH3RF1-203ENST00000508685 FAM184AQ8NB25 1140 aa13.16□□□□□ -0.3
SH3RF1-203ENST00000508685 CCDC39Q9UFE4 941 aa13.16□□□□□ -0.3
SH3RF1-203ENST00000508685 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.16□□□□□ -0.3
SH3RF1-203ENST00000508685 ATP6V1DQ9Y5K8 247 aa13.16□□□□□ -0.3
SH3RF1-203ENST00000508685 SNX14Q9Y5W7 946 aa13.16□□□□□ -0.3
SH3RF1-203ENST00000508685 ITGA6P23229 1130 aa13.15□□□□□ -0.3
SH3RF1-203ENST00000508685 TAF7LQ5H9L4 462 aa13.15□□□□□ -0.3
SH3RF1-203ENST00000508685 NOL8Q76FK4 1167 aaKnown RBP13.15□□□□□ -0.3
SH3RF1-203ENST00000508685 DDX46Q7L014 1031 aaKnown RBP13.15□□□□□ -0.3
SH3RF1-203ENST00000508685 TMEM87AQ8NBN3 555 aa13.15□□□□□ -0.3
SH3RF1-203ENST00000508685 TMEM63CQ9P1W3 806 aa13.15□□□□□ -0.3
SH3RF1-203ENST00000508685 CCDC171Q6TFL3 1326 aa13.15□□□□□ -0.3
SH3RF1-203ENST00000508685 COL5A3P25940 1745 aaPredicted RBP13.15□□□□□ -0.3
SH3RF1-203ENST00000508685 HIP1O00291 1037 aa13.15□□□□□ -0.3
SH3RF1-203ENST00000508685 CAMTA2O94983 1202 aa13.15□□□□□ -0.3
SH3RF1-203ENST00000508685 UVSSAQ2YD98 709 aa13.15□□□□□ -0.3
SH3RF1-203ENST00000508685 ZNF589Q86UQ0 364 aaPredicted RBP13.15□□□□□ -0.3
SH3RF1-203ENST00000508685 SMARCC1Q92922 1105 aaPredicted RBP13.15□□□□□ -0.3
SH3RF1-203ENST00000508685 HAUS7Q99871 368 aa13.15□□□□□ -0.3
SH3RF1-203ENST00000508685 TSPY26PQ9H489 355 aa13.15□□□□□ -0.3
SH3RF1-203ENST00000508685 GPR108Q9NPR9 543 aa13.15□□□□□ -0.3
SH3RF1-203ENST00000508685 SYCE3A1L190 88 aa13.14□□□□□ -0.31
SH3RF1-203ENST00000508685 SF3B2Q13435 895 aaKnown RBP13.14□□□□□ -0.31
SH3RF1-203ENST00000508685 SUSD4Q5VX71 490 aa13.14□□□□□ -0.31
SH3RF1-203ENST00000508685 LINC00116Q8NCU8 138 aa13.14□□□□□ -0.31
SH3RF1-203ENST00000508685 CEP126Q9P2H0 1117 aa13.14□□□□□ -0.31
SH3RF1-203ENST00000508685 RIC1Q4ADV7 1423 aa13.14□□□□□ -0.31
SH3RF1-203ENST00000508685 MED23Q9ULK4 1368 aa13.14□□□□□ -0.31
SH3RF1-203ENST00000508685 PRPF40BQ6NWY9 871 aaKnown RBP13.13□□□□□ -0.31
SH3RF1-203ENST00000508685 MYH3P11055 1940 aa13.13□□□□□ -0.31
SH3RF1-203ENST00000508685 PRKCSHP14314 528 aaPredicted RBP13.13□□□□□ -0.31
SH3RF1-203ENST00000508685 HCLS1P14317 486 aaPredicted RBP13.13□□□□□ -0.31
SH3RF1-203ENST00000508685 ADORA1P30542 326 aa13.13□□□□□ -0.31
SH3RF1-203ENST00000508685 HSP90AA2PQ14568 343 aaPredicted RBP13.13□□□□□ -0.31
SH3RF1-203ENST00000508685 LDHAL6AQ6ZMR3 332 aa13.13□□□□□ -0.31
SH3RF1-203ENST00000508685 SMIM5Q71RC9 77 aa13.13□□□□□ -0.31
SH3RF1-203ENST00000508685 RBM27Q9P2N5 1060 aaKnown RBP13.13□□□□□ -0.31
SH3RF1-203ENST00000508685 LIMCH1Q9UPQ0 1083 aa13.13□□□□□ -0.31
SH3RF1-203ENST00000508685 GOLIM4O00461 696 aa13.12□□□□□ -0.31
SH3RF1-203ENST00000508685 PDE8AO60658 829 aa13.12□□□□□ -0.31
SH3RF1-203ENST00000508685 CPA1P15085 419 aa13.12□□□□□ -0.31
SH3RF1-203ENST00000508685 ZSCAN31Q96LW9 406 aaPredicted RBP13.12□□□□□ -0.31
SH3RF1-203ENST00000508685 SNRKQ9NRH2 765 aa13.12□□□□□ -0.31
SH3RF1-203ENST00000508685 ZKSCAN5Q9Y2L8 839 aa13.12□□□□□ -0.31
SH3RF1-203ENST00000508685 RBM8AQ9Y5S9 174 aaKnown RBP13.12□□□□□ -0.31
SH3RF1-203ENST00000508685 ANKRD18BA2A2Z9 1011 aa13.12□□□□□ -0.31
SH3RF1-203ENST00000508685 NECTIN1Q15223 517 aa13.12□□□□□ -0.31
SH3RF1-203ENST00000508685 ADCK5Q3MIX3 580 aa13.12□□□□□ -0.31
SH3RF1-203ENST00000508685 SLFNL1Q499Z3 407 aa13.12□□□□□ -0.31
SH3RF1-203ENST00000508685 MAP4K1Q92918 833 aa13.12□□□□□ -0.31
SH3RF1-203ENST00000508685 SEC62Q99442 399 aaKnown RBP13.12□□□□□ -0.31
SH3RF1-203ENST00000508685 TM6SF1Q9BZW5 370 aa13.12□□□□□ -0.31
SH3RF1-203ENST00000508685 PAG1Q9NWQ8 432 aa13.12□□□□□ -0.31
SH3RF1-203ENST00000508685 FBXO3Q9UK99 471 aa13.12□□□□□ -0.31
SH3RF1-203ENST00000508685 NIP7Q9Y221 180 aaKnown RBP eCLIP13.12□□□□□ -0.31
SH3RF1-203ENST00000508685 RIPOR2Q9Y4F9 1068 aa13.12□□□□□ -0.31
SH3RF1-203ENST00000508685 SH3TC1Q8TE82 1336 aa13.11□□□□□ -0.31
SH3RF1-203ENST00000508685 TRIM37O94972 964 aa13.11□□□□□ -0.31
SH3RF1-203ENST00000508685 METTL24Q5JXM2 366 aa13.11□□□□□ -0.31
SH3RF1-203ENST00000508685 KBTBD3Q8NAB2 608 aa13.11□□□□□ -0.31
SH3RF1-203ENST00000508685 XAGE2Q96GT9 111 aa13.11□□□□□ -0.31
SH3RF1-203ENST00000508685 TTC14Q96N46 770 aa13.11□□□□□ -0.31
SH3RF1-203ENST00000508685 BTAF1O14981 1849 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms