RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 PDGFAP04085 211 aa9.2□□□□□ -0.94
UBE2D3-225ENST00000508476 PLD4Q96BZ4 506 aa9.2□□□□□ -0.94
UBE2D3-225ENST00000508476 NPR3P17342 541 aa9.19□□□□□ -0.94
UBE2D3-225ENST00000508476 TTC39BQ5VTQ0 682 aaPredicted RBP9.19□□□□□ -0.94
UBE2D3-225ENST00000508476 MSL1Q68DK7 614 aa9.19□□□□□ -0.94
UBE2D3-225ENST00000508476 ELP3Q9H9T3 547 aa9.19□□□□□ -0.94
UBE2D3-225ENST00000508476 ABI2Q9NYB9 513 aaPredicted RBP9.19□□□□□ -0.94
UBE2D3-225ENST00000508476 CNTN3Q9P232 1028 aa9.19□□□□□ -0.94
UBE2D3-225ENST00000508476 GHRHP01286 108 aa9.18□□□□□ -0.94
UBE2D3-225ENST00000508476 SERPINB4P48594 390 aa9.18□□□□□ -0.94
UBE2D3-225ENST00000508476 ZNF438Q7Z4V0 828 aa9.18□□□□□ -0.94
UBE2D3-225ENST00000508476 POLIQ9UNA4 740 aa9.18□□□□□ -0.94
UBE2D3-225ENST00000508476 MZF1P28698 734 aaPredicted RBP9.17□□□□□ -0.94
UBE2D3-225ENST00000508476 BAG6P46379 1132 aa9.17□□□□□ -0.94
UBE2D3-225ENST00000508476 ATP11AP98196 1134 aa9.17□□□□□ -0.94
UBE2D3-225ENST00000508476 FKBP4Q02790 459 aaKnown RBP eCLIP9.17□□□□□ -0.94
UBE2D3-225ENST00000508476 C8orf34Q49A92 452 aa9.17□□□□□ -0.94
UBE2D3-225ENST00000508476 GDF6Q6KF10 455 aaPredicted RBP9.17□□□□□ -0.94
UBE2D3-225ENST00000508476 SHISA2Q6UWI4 295 aa9.17□□□□□ -0.94
UBE2D3-225ENST00000508476 TTC9Q92623 222 aa9.17□□□□□ -0.94
UBE2D3-225ENST00000508476 TRIM33Q9UPN9 1127 aa9.17□□□□□ -0.94
UBE2D3-225ENST00000508476 SELPP16109 830 aa9.16□□□□□ -0.94
UBE2D3-225ENST00000508476 AAMPQ13685 434 aa9.16□□□□□ -0.94
UBE2D3-225ENST00000508476 PDE12Q6L8Q7 609 aaKnown RBP9.16□□□□□ -0.94
UBE2D3-225ENST00000508476 WFDC8Q8IUA0 241 aa9.16□□□□□ -0.94
UBE2D3-225ENST00000508476 FMR1NBQ8N0W7 255 aaPredicted RBP9.16□□□□□ -0.94
UBE2D3-225ENST00000508476 CCDC87Q9NVE4 849 aa9.16□□□□□ -0.94
UBE2D3-225ENST00000508476 KANSL3Q9P2N6 904 aa9.16□□□□□ -0.94
UBE2D3-225ENST00000508476 MTMR7Q9Y216 660 aa9.16□□□□□ -0.94
UBE2D3-225ENST00000508476 FZD6O60353 706 aa9.15□□□□□ -0.94
UBE2D3-225ENST00000508476 FAM13AO94988 1023 aa9.15□□□□□ -0.94
UBE2D3-225ENST00000508476 APBA3O96018 575 aa9.15□□□□□ -0.94
UBE2D3-225ENST00000508476 RAC1P63000 192 aa9.15□□□□□ -0.94
UBE2D3-225ENST00000508476 HYAL2Q12891 473 aa9.15□□□□□ -0.94
UBE2D3-225ENST00000508476 SF3B2Q13435 895 aaKnown RBP9.15□□□□□ -0.94
UBE2D3-225ENST00000508476 ADAMTSL4Q6UY14 1074 aa9.15□□□□□ -0.94
UBE2D3-225ENST00000508476 C1orf127Q8N9H9 656 aa9.15□□□□□ -0.94
UBE2D3-225ENST00000508476 ELNP15502 786 aa9.14□□□□□ -0.95
UBE2D3-225ENST00000508476 SUZ12Q15022 739 aaKnown RBP9.14□□□□□ -0.95
UBE2D3-225ENST00000508476 ALKBH2Q6NS38 261 aa9.14□□□□□ -0.95
UBE2D3-225ENST00000508476 RASSF4Q9H2L5 321 aa9.14□□□□□ -0.95
UBE2D3-225ENST00000508476 DEAF1O75398 565 aaPredicted RBP9.13□□□□□ -0.95
UBE2D3-225ENST00000508476 KIF4AO95239 1232 aa9.13□□□□□ -0.95
UBE2D3-225ENST00000508476 FURINP09958 794 aa9.13□□□□□ -0.95
UBE2D3-225ENST00000508476 ACPPP15309 386 aa9.13□□□□□ -0.95
UBE2D3-225ENST00000508476 ECM1Q16610 540 aa9.13□□□□□ -0.95
UBE2D3-225ENST00000508476 B4GALNT3Q6L9W6 998 aa9.13□□□□□ -0.95
UBE2D3-225ENST00000508476 XKR5Q6UX68 686 aa9.13□□□□□ -0.95
UBE2D3-225ENST00000508476 IL22RA1Q8N6P7 574 aa9.13□□□□□ -0.95
UBE2D3-225ENST00000508476 RBSNQ9H1K0 784 aa9.13□□□□□ -0.95
UBE2D3-225ENST00000508476 CHRDQ9H2X0 955 aa9.13□□□□□ -0.95
UBE2D3-225ENST00000508476 H3BRB1 525 aa9.12□□□□□ -0.95
UBE2D3-225ENST00000508476 ICMTO60725 284 aa9.12□□□□□ -0.95
UBE2D3-225ENST00000508476 PCSK2P16519 638 aa9.12□□□□□ -0.95
UBE2D3-225ENST00000508476 GATA4P43694 442 aa9.12□□□□□ -0.95
UBE2D3-225ENST00000508476 DOC2BQ14184 412 aa9.12□□□□□ -0.95
UBE2D3-225ENST00000508476 NCAPG2Q86XI2 1143 aa9.12□□□□□ -0.95
UBE2D3-225ENST00000508476 TUT1Q9H6E5 874 aaKnown RBP9.12□□□□□ -0.95
UBE2D3-225ENST00000508476 RPLP1P05386 114 aaKnown RBP9.11□□□□□ -0.95
UBE2D3-225ENST00000508476 CEP135Q66GS9 1140 aa9.11□□□□□ -0.95
UBE2D3-225ENST00000508476 FBXO11Q86XK2 927 aa9.11□□□□□ -0.95
UBE2D3-225ENST00000508476 CEP120Q8N960 986 aa9.11□□□□□ -0.95
UBE2D3-225ENST00000508476 SPACA7Q96KW9 195 aa9.11□□□□□ -0.95
UBE2D3-225ENST00000508476 LACRTQ9GZZ8 138 aa9.11□□□□□ -0.95
UBE2D3-225ENST00000508476 CES1P23141 567 aa9.1□□□□□ -0.95
UBE2D3-225ENST00000508476 MBTPS1Q14703 1052 aa9.1□□□□□ -0.95
UBE2D3-225ENST00000508476 TXNDC2Q86VQ3 553 aa9.1□□□□□ -0.95
UBE2D3-225ENST00000508476 DTWD1Q8N5C7 304 aa9.1□□□□□ -0.95
UBE2D3-225ENST00000508476 TTC16Q8NEE8 873 aa9.1□□□□□ -0.95
UBE2D3-225ENST00000508476 NACC1Q96RE7 527 aa9.1□□□□□ -0.95
UBE2D3-225ENST00000508476 EGFL7Q9UHF1 273 aa9.1□□□□□ -0.95
UBE2D3-225ENST00000508476 SALL4Q9UJQ4 1053 aa9.1□□□□□ -0.95
UBE2D3-225ENST00000508476 FOXD3Q9UJU5 478 aaPredicted RBP9.1□□□□□ -0.95
UBE2D3-225ENST00000508476 TNFRSF21O75509 655 aa9.09□□□□□ -0.95
UBE2D3-225ENST00000508476 TRPA1O75762 1119 aa9.09□□□□□ -0.95
UBE2D3-225ENST00000508476 LENG1Q96BZ8 264 aaPredicted RBP9.09□□□□□ -0.95
UBE2D3-225ENST00000508476 HHIPQ96QV1 700 aa9.09□□□□□ -0.95
UBE2D3-225ENST00000508476 PBX4Q9BYU1 374 aa9.09□□□□□ -0.95
UBE2D3-225ENST00000508476 C9orf172C9J069 976 aa9.08□□□□□ -0.96
UBE2D3-225ENST00000508476 EREGO14944 169 aa9.08□□□□□ -0.96
UBE2D3-225ENST00000508476 ADAM23O75077 832 aa9.08□□□□□ -0.96
UBE2D3-225ENST00000508476 CDC25BP30305 580 aa9.08□□□□□ -0.96
UBE2D3-225ENST00000508476 ADGRE1Q14246 886 aa9.08□□□□□ -0.96
UBE2D3-225ENST00000508476 TXNDC11Q6PKC3 985 aa9.08□□□□□ -0.96
UBE2D3-225ENST00000508476 GLYCTKQ8IVS8 523 aa9.08□□□□□ -0.96
UBE2D3-225ENST00000508476 GJD3Q8N144 294 aa9.08□□□□□ -0.96
UBE2D3-225ENST00000508476 TPSG1Q9NRR2 321 aa9.08□□□□□ -0.96
UBE2D3-225ENST00000508476 USP21Q9UK80 565 aa9.08□□□□□ -0.96
UBE2D3-225ENST00000508476 SMNDC1O75940 238 aaKnown RBP eCLIP9.07□□□□□ -0.963e-7■□□□□ 8.1
UBE2D3-225ENST00000508476 ARHGAP4P98171 946 aa9.07□□□□□ -0.96
UBE2D3-225ENST00000508476 POP1Q99575 1024 aaKnown RBP9.07□□□□□ -0.96
UBE2D3-225ENST00000508476 NFKBIEO00221 500 aa9.06□□□□□ -0.96
UBE2D3-225ENST00000508476 DLL1O00548 723 aa9.06□□□□□ -0.96
UBE2D3-225ENST00000508476 SETDB1Q15047 1291 aa9.06□□□□□ -0.96
UBE2D3-225ENST00000508476 SH2B1Q9NRF2 756 aaPredicted RBP9.06□□□□□ -0.96
UBE2D3-225ENST00000508476 LINC01387J3KSC0 135 aa9.05□□□□□ -0.96
UBE2D3-225ENST00000508476 K7ELQ4 463 aaPredicted RBP9.05□□□□□ -0.96
UBE2D3-225ENST00000508476 PHACTR2O75167 634 aa9.05□□□□□ -0.96
UBE2D3-225ENST00000508476 USP5P45974 858 aa9.05□□□□□ -0.96
UBE2D3-225ENST00000508476 DZANK1Q9NVP4 752 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms