RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, humanhuman

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-205ENST00000508386 GOLGA2Q08379 1002 aa7.7□□□□□ -1.18
KDM3B-205ENST00000508386 KIAA2012Q0VF49 1180 aa7.7□□□□□ -1.18
KDM3B-205ENST00000508386 GRIPAP1Q4V328 841 aa7.7□□□□□ -1.18
KDM3B-205ENST00000508386 SLC10A5Q5PT55 438 aa7.7□□□□□ -1.18
KDM3B-205ENST00000508386 LRP10Q7Z4F1 713 aa7.7□□□□□ -1.18
KDM3B-205ENST00000508386 CTU1Q7Z7A3 348 aaKnown RBP7.7□□□□□ -1.18
KDM3B-205ENST00000508386 MICALL2Q8IY33 904 aa7.7□□□□□ -1.18
KDM3B-205ENST00000508386 OTUD5Q96G74 571 aa7.7□□□□□ -1.18
KDM3B-205ENST00000508386 RBM17Q96I25 401 aaKnown RBP7.7□□□□□ -1.18
KDM3B-205ENST00000508386 NYXQ9GZU5 481 aa7.7□□□□□ -1.18
KDM3B-205ENST00000508386 VPS33BQ9H267 617 aa7.7□□□□□ -1.18
KDM3B-205ENST00000508386 ZBTB3Q9H5J0 574 aa7.7□□□□□ -1.18
KDM3B-205ENST00000508386 GBA2Q9HCG7 927 aaPredicted RBP7.7□□□□□ -1.18
KDM3B-205ENST00000508386 TAF1P21675 1872 aa7.69□□□□□ -1.18
KDM3B-205ENST00000508386 DUOX1Q9NRD9 1551 aa7.69□□□□□ -1.18
KDM3B-205ENST00000508386 PSMD14O00487 310 aa7.69□□□□□ -1.18
KDM3B-205ENST00000508386 SEC24BO95487 1268 aa7.69□□□□□ -1.18
KDM3B-205ENST00000508386 SLC10A3P09131 477 aa7.69□□□□□ -1.18
KDM3B-205ENST00000508386 ZNF157P51786 506 aaPredicted RBP7.69□□□□□ -1.18
KDM3B-205ENST00000508386 TBC1D10BQ4KMP7 808 aaPredicted RBP7.69□□□□□ -1.18
KDM3B-205ENST00000508386 HABP4Q5JVS0 413 aaKnown RBP7.69□□□□□ -1.18
KDM3B-205ENST00000508386 IER5LQ5T953 404 aa7.69□□□□□ -1.18
KDM3B-205ENST00000508386 KRT26Q7Z3Y9 468 aa7.69□□□□□ -1.18
KDM3B-205ENST00000508386 SP8Q8IXZ3 490 aa7.69□□□□□ -1.18
KDM3B-205ENST00000508386 BCL2L13Q9BXK5 485 aa7.69□□□□□ -1.18
KDM3B-205ENST00000508386 R3HDMLQ9H3Y0 253 aa7.69□□□□□ -1.18
KDM3B-205ENST00000508386 TIMELESSQ9UNS1 1208 aa7.69□□□□□ -1.18
KDM3B-205ENST00000508386 TRIM35Q9UPQ4 493 aa7.69□□□□□ -1.18
KDM3B-205ENST00000508386 RRP7AQ9Y3A4 280 aaKnown RBP7.69□□□□□ -1.18
KDM3B-205ENST00000508386 COL4A1P02462 1669 aa7.69□□□□□ -1.18
KDM3B-205ENST00000508386 IBTKQ9P2D0 1353 aaPredicted RBP7.69□□□□□ -1.18
KDM3B-205ENST00000508386 KIAA0100Q14667 2235 aaKnown RBP7.68□□□□□ -1.18
KDM3B-205ENST00000508386 TBC1D8O95759 1140 aa7.68□□□□□ -1.18
KDM3B-205ENST00000508386 MYL6BP14649 208 aa7.68□□□□□ -1.18
KDM3B-205ENST00000508386 CNGB1Q14028 1251 aaPredicted RBP7.68□□□□□ -1.18
KDM3B-205ENST00000508386 TNIP1Q15025 636 aa7.68□□□□□ -1.18
KDM3B-205ENST00000508386 PDIA6Q15084 440 aa7.68□□□□□ -1.18
KDM3B-205ENST00000508386 RBM26Q5T8P6 1007 aaKnown RBP7.68□□□□□ -1.18
KDM3B-205ENST00000508386 DPP8Q6V1X1 898 aaPredicted RBP7.68□□□□□ -1.18
KDM3B-205ENST00000508386 MOB2Q70IA6 237 aa7.68□□□□□ -1.18
KDM3B-205ENST00000508386 MPNDQ8N594 471 aa7.68□□□□□ -1.18
KDM3B-205ENST00000508386 ZNF296Q8WUU4 475 aaPredicted RBP7.68□□□□□ -1.18
KDM3B-205ENST00000508386 DPF2Q92785 391 aa7.68□□□□□ -1.18
KDM3B-205ENST00000508386 CCDC102AQ96A19 550 aa7.68□□□□□ -1.18
KDM3B-205ENST00000508386 CDHR2Q9BYE9 1310 aa7.68□□□□□ -1.18
KDM3B-205ENST00000508386 RTL9Q8NET4 1388 aa7.68□□□□□ -1.18
KDM3B-205ENST00000508386 TRIOBPQ9H2D6 2365 aa7.68□□□□□ -1.18
KDM3B-205ENST00000508386 COL6A3P12111 3177 aa7.67□□□□□ -1.18
KDM3B-205ENST00000508386 H7C1D1 291 aa7.67□□□□□ -1.18
KDM3B-205ENST00000508386 BBOX1O75936 387 aa7.67□□□□□ -1.18
KDM3B-205ENST00000508386 HCLS1P14317 486 aaPredicted RBP7.67□□□□□ -1.18
KDM3B-205ENST00000508386 EIF4A1P60842 406 aaKnown RBP7.67□□□□□ -1.18
KDM3B-205ENST00000508386 TAF7Q15545 349 aaPredicted RBP7.67□□□□□ -1.18
KDM3B-205ENST00000508386 PROSER3Q2NL68 480 aa7.67□□□□□ -1.18
KDM3B-205ENST00000508386 GIGYF2Q6Y7W6 1299 aaKnown RBP7.67□□□□□ -1.18
KDM3B-205ENST00000508386 RASAL3Q86YV0 1011 aa7.67□□□□□ -1.18
KDM3B-205ENST00000508386 C2orf69Q8N8R5 385 aa7.67□□□□□ -1.18
KDM3B-205ENST00000508386 ZNF428Q96B54 188 aa7.67□□□□□ -1.18
KDM3B-205ENST00000508386 NLRP3Q96P20 1036 aa7.67□□□□□ -1.18
KDM3B-205ENST00000508386 THUMPD2Q9BTF0 503 aaKnown RBP7.67□□□□□ -1.18
KDM3B-205ENST00000508386 DBNDD1Q9H9R9 158 aa7.67□□□□□ -1.18
KDM3B-205ENST00000508386 SCAF8Q9UPN6 1271 aaKnown RBP7.67□□□□□ -1.18
KDM3B-205ENST00000508386 AKAP11Q9UKA4 1901 aa7.67□□□□□ -1.18
KDM3B-205ENST00000508386 ANXA1P04083 346 aa7.66□□□□□ -1.18
KDM3B-205ENST00000508386 FXR1P51114 621 aaKnown RBP eCLIP7.66□□□□□ -1.18
KDM3B-205ENST00000508386 MKRN3Q13064 507 aaKnown RBP7.66□□□□□ -1.18
KDM3B-205ENST00000508386 SUPT20HQ8NEM7 779 aa7.66□□□□□ -1.18
KDM3B-205ENST00000508386 CDCA5Q96FF9 252 aa7.66□□□□□ -1.18
KDM3B-205ENST00000508386 SCUBE2Q9NQ36 999 aa7.66□□□□□ -1.18
KDM3B-205ENST00000508386 POLLQ9UGP5 575 aa7.66□□□□□ -1.18
KDM3B-205ENST00000508386 CUL9Q8IWT3 2517 aa7.66□□□□□ -1.18
KDM3B-205ENST00000508386 POTEFA5A3E0 1075 aa7.65□□□□□ -1.18
KDM3B-205ENST00000508386 GRAPQ13588 217 aa7.65□□□□□ -1.18
KDM3B-205ENST00000508386 SCN9AQ15858 1988 aa7.65□□□□□ -1.18
KDM3B-205ENST00000508386 DOK7Q18PE1 504 aa7.65□□□□□ -1.18
KDM3B-205ENST00000508386 KIF6Q6ZMV9 814 aa7.65□□□□□ -1.18
KDM3B-205ENST00000508386 GRAPLQ8TC17 118 aaPredicted RBP7.65□□□□□ -1.18
KDM3B-205ENST00000508386 BBXQ8WY36 941 aaPredicted RBP7.65□□□□□ -1.18
KDM3B-205ENST00000508386 UTP14AQ9BVJ6 771 aaKnown RBP7.65□□□□□ -1.18
KDM3B-205ENST00000508386 LAMB2P55268 1798 aa7.64□□□□□ -1.19
KDM3B-205ENST00000508386 LAMA3Q16787 3333 aa7.64□□□□□ -1.19
KDM3B-205ENST00000508386 UBE2Q2LH0YL09 131 aa7.64□□□□□ -1.19
KDM3B-205ENST00000508386 GPR25O00155 361 aa7.64□□□□□ -1.19
KDM3B-205ENST00000508386 RIMBP2O15034 1052 aa7.64□□□□□ -1.19
KDM3B-205ENST00000508386 HTATSF1O43719 755 aaKnown RBP7.64□□□□□ -1.19
KDM3B-205ENST00000508386 GPSM2P81274 684 aa7.64□□□□□ -1.19
KDM3B-205ENST00000508386 CAP1Q01518 475 aa7.64□□□□□ -1.19
KDM3B-205ENST00000508386 PARP10Q53GL7 1025 aa7.64□□□□□ -1.19
KDM3B-205ENST00000508386 PRAMEF18Q5VWM3 479 aa7.64□□□□□ -1.19
KDM3B-205ENST00000508386 PPP1R42Q7Z4L9 355 aa7.64□□□□□ -1.19
KDM3B-205ENST00000508386 NLRP10Q86W26 655 aa7.64□□□□□ -1.19
KDM3B-205ENST00000508386 EFCAB3Q8N7B9 438 aa7.64□□□□□ -1.19
KDM3B-205ENST00000508386 RTF1Q92541 710 aaKnown RBP7.64□□□□□ -1.19
KDM3B-205ENST00000508386 CELF1Q92879 486 aaKnown RBP7.64□□□□□ -1.19
KDM3B-205ENST00000508386 GGA3Q9NZ52 723 aa7.64□□□□□ -1.19
KDM3B-205ENST00000508386 LAMB4A4D0S4 1761 aa7.64□□□□□ -1.19
KDM3B-205ENST00000508386 VIL1P09327 827 aaKnown RBP7.63□□□□□ -1.19
KDM3B-205ENST00000508386 U2AF1L5P0DN76 240 aaPredicted RBP7.63□□□□□ -1.19
KDM3B-205ENST00000508386 TM4SF4P48230 202 aa7.63□□□□□ -1.19
KDM3B-205ENST00000508386 U2AF1Q01081 240 aaKnown RBP eCLIP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms