RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 PLIN1O60240 522 aa7.11□□□□□ -1.27
PDE4D-216ENST00000507116 FOSL1P15407 271 aa7.11□□□□□ -1.27
PDE4D-216ENST00000507116 RPL13P26373 211 aaKnown RBP7.11□□□□□ -1.27
PDE4D-216ENST00000507116 POU5F1Q01860 360 aaKnown RBP7.11□□□□□ -1.27
PDE4D-216ENST00000507116 SMC1AQ14683 1233 aaKnown RBP7.11□□□□□ -1.27
PDE4D-216ENST00000507116 Q4G0T1 1027 aa7.11□□□□□ -1.27
PDE4D-216ENST00000507116 CWF19L1Q69YN2 538 aaKnown RBP7.11□□□□□ -1.27
PDE4D-216ENST00000507116 PACS1Q6VY07 963 aa7.11□□□□□ -1.27
PDE4D-216ENST00000507116 NYAP1Q6ZVC0 841 aa7.11□□□□□ -1.27
PDE4D-216ENST00000507116 AFAP1Q8N556 730 aa7.11□□□□□ -1.27
PDE4D-216ENST00000507116 C16orf45Q96MC5 204 aaPredicted RBP7.11□□□□□ -1.27
PDE4D-216ENST00000507116 SPOCK3Q9BQ16 436 aa7.11□□□□□ -1.27
PDE4D-216ENST00000507116 ACBD3Q9H3P7 528 aa7.11□□□□□ -1.27
PDE4D-216ENST00000507116 DNAAF2Q9NVR5 837 aaKnown RBP7.11□□□□□ -1.27
PDE4D-216ENST00000507116 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.11□□□□□ -1.27
PDE4D-216ENST00000507116 ANKRD36BQ8N2N9 1353 aa7.1□□□□□ -1.27
PDE4D-216ENST00000507116 TRIM37O94972 964 aa7.1□□□□□ -1.27
PDE4D-216ENST00000507116 MBD3O95983 291 aa7.1□□□□□ -1.27
PDE4D-216ENST00000507116 PEX5LQ8IYB4 626 aa7.1□□□□□ -1.27
PDE4D-216ENST00000507116 FNBP4Q8N3X1 1017 aaPredicted RBP7.1□□□□□ -1.27
PDE4D-216ENST00000507116 MAB21L3Q8N8X9 362 aa7.1□□□□□ -1.27
PDE4D-216ENST00000507116 C1orf131Q8NDD1 294 aaKnown RBP7.1□□□□□ -1.27
PDE4D-216ENST00000507116 MPHOSPH6Q99547 160 aaKnown RBP7.1□□□□□ -1.27
PDE4D-216ENST00000507116 TDRD9Q8NDG6 1382 aaKnown RBP7.1□□□□□ -1.27
PDE4D-216ENST00000507116 TONSLQ96HA7 1378 aa7.1□□□□□ -1.27
PDE4D-216ENST00000507116 TRIM64CA6NLI5 447 aa7.1□□□□□ -1.27
PDE4D-216ENST00000507116 MSL3P1P0C860 447 aa7.1□□□□□ -1.27
PDE4D-216ENST00000507116 GCLCP48506 637 aaPredicted RBP7.1□□□□□ -1.27
PDE4D-216ENST00000507116 MCTP1Q6DN14 999 aa7.1□□□□□ -1.27
PDE4D-216ENST00000507116 TMC6Q7Z403 805 aa7.1□□□□□ -1.27
PDE4D-216ENST00000507116 DDX12PQ92771 950 aa7.1□□□□□ -1.27
PDE4D-216ENST00000507116 RBM41Q96IZ5 413 aaKnown RBP7.1□□□□□ -1.27
PDE4D-216ENST00000507116 ALS2CR12Q96Q35 445 aa7.1□□□□□ -1.27
PDE4D-216ENST00000507116 MAK16Q9BXY0 300 aaKnown RBP7.1□□□□□ -1.27
PDE4D-216ENST00000507116 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.1□□□□□ -1.27
PDE4D-216ENST00000507116 RTEL1-TNFRSF6BF6WH68 1400 aa7.1□□□□□ -1.27
PDE4D-216ENST00000507116 HOXD10P28358 340 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 ROR2Q01974 943 aaKnown RBP7.09□□□□□ -1.27
PDE4D-216ENST00000507116 SMYD1Q8NB12 490 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 CCDC150Q8NCX0 1101 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 SENP2Q9HC62 589 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 HOXC10Q9NYD6 342 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.09□□□□□ -1.27
PDE4D-216ENST00000507116 ELP1O95163 1332 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 EVC2Q86UK5 1308 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 EIF3FO00303 357 aaPredicted RBP7.09□□□□□ -1.27
PDE4D-216ENST00000507116 CAVIN2O95810 425 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 ZNF132P52740 706 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 PABPC4Q13310 644 aaKnown RBP eCLIP7.09□□□□□ -1.27
PDE4D-216ENST00000507116 KCNB1Q14721 858 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 COL19A1Q14993 1142 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 CLPPQ16740 277 aaPredicted RBP7.09□□□□□ -1.27
PDE4D-216ENST00000507116 FBXW10Q5XX13 1052 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 UBE2Q1Q7Z7E8 422 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 CLASRPQ8N2M8 674 aaKnown RBP7.09□□□□□ -1.27
PDE4D-216ENST00000507116 ARHGAP45Q92619 1136 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 PMM1Q92871 262 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 PARD6BQ9BYG5 372 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 MRC2Q9UBG0 1479 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 EZRP15311 586 aaKnown RBP7.09□□□□□ -1.27
PDE4D-216ENST00000507116 LIG3P49916 1009 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 ISM2Q6H9L7 571 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 SH3GL1Q99961 368 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 SLC39A3Q9BRY0 314 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 LRRC27Q9C0I9 530 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 BRD8Q9H0E9 1235 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 KCNF1Q9H3M0 494 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 WWC3Q9ULE0 1092 aa7.09□□□□□ -1.27
PDE4D-216ENST00000507116 SKAP2O75563 359 aaPredicted RBP7.08□□□□□ -1.28
PDE4D-216ENST00000507116 ATICP31939 592 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 LMBR1Q8WVP7 490 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 CUL5Q93034 780 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 MPP4Q96JB8 637 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 TRMT1Q9NXH9 659 aaKnown RBP7.08□□□□□ -1.28
PDE4D-216ENST00000507116 QPCTLQ9NXS2 382 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 SWAP70Q9UH65 585 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 DIS3Q9Y2L1 958 aaKnown RBP7.08□□□□□ -1.28
PDE4D-216ENST00000507116 KAT6BQ8WYB5 2073 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 SCNN1BP51168 640 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 HDAC4P56524 1084 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 EIF2B5Q13144 721 aaKnown RBP7.08□□□□□ -1.28
PDE4D-216ENST00000507116 LMOD2Q6P5Q4 547 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 CEP57L1Q8IYX8 460 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 SLC43A3Q8NBI5 491 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 SLC35B4Q969S0 331 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 RBM33Q96EV2 1170 aaKnown RBP7.08□□□□□ -1.28
PDE4D-216ENST00000507116 UIMC1Q96RL1 719 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 GINM1Q9NU53 330 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 BOLA2-SMG1P6H3BVE0 249 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 M0R2C6 588 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 KIF3BO15066 747 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 DESP17661 470 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 PAPOLAP51003 745 aaKnown RBP7.08□□□□□ -1.28
PDE4D-216ENST00000507116 PPP4CP60510 307 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 RCN1Q15293 331 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 THEMIS2Q5TEJ8 643 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 FOXR1Q6PIV2 292 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 ZNF662Q6ZS27 426 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 HOOK3Q86VS8 718 aa7.08□□□□□ -1.28
PDE4D-216ENST00000507116 CCDC170Q8IYT3 715 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms