RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 NOL8Q76FK4 1167 aaKnown RBP8.72□□□□□ -1.01
PDGFC-203ENST00000502773 DHX32Q7L7V1 743 aaKnown RBP8.72□□□□□ -1.01
PDGFC-203ENST00000502773 WASF1Q92558 559 aa8.72□□□□□ -1.01
PDGFC-203ENST00000502773 MEGF6O75095 1541 aa8.72□□□□□ -1.01
PDGFC-203ENST00000502773 PDE8AO60658 829 aa8.72□□□□□ -1.01
PDGFC-203ENST00000502773 IGHMBP2P38935 993 aaKnown RBP8.72□□□□□ -1.01
PDGFC-203ENST00000502773 ISCA1Q9BUE6 129 aa8.72□□□□□ -1.01
PDGFC-203ENST00000502773 MROH5Q6ZUA9 1318 aa8.71□□□□□ -1.01
PDGFC-203ENST00000502773 VPS37CA5D8V6 355 aaPredicted RBP8.71□□□□□ -1.01
PDGFC-203ENST00000502773 ATP5J2-PTCD1G3V325 749 aa8.71□□□□□ -1.01
PDGFC-203ENST00000502773 CPLX1O14810 134 aa8.71□□□□□ -1.01
PDGFC-203ENST00000502773 XRCC6P12956 609 aaKnown RBP eCLIP8.71□□□□□ -1.01
PDGFC-203ENST00000502773 WASHC4Q2M389 1173 aa8.71□□□□□ -1.01
PDGFC-203ENST00000502773 TSHZ3Q63HK5 1081 aa8.71□□□□□ -1.01
PDGFC-203ENST00000502773 IPO4Q8TEX9 1081 aaKnown RBP8.71□□□□□ -1.01
PDGFC-203ENST00000502773 PALLDQ8WX93 1383 aa8.71□□□□□ -1.02
PDGFC-203ENST00000502773 WDR19Q8NEZ3 1342 aa8.71□□□□□ -1.02
PDGFC-203ENST00000502773 GJB2P29033 226 aa8.71□□□□□ -1.02
PDGFC-203ENST00000502773 ZSCAN23Q3MJ62 389 aa8.71□□□□□ -1.02
PDGFC-203ENST00000502773 ZNF512BQ96KM6 892 aaPredicted RBP8.71□□□□□ -1.02
PDGFC-203ENST00000502773 MPHOSPH8Q99549 860 aa8.71□□□□□ -1.02
PDGFC-203ENST00000502773 TOM1O60784 492 aa8.71□□□□□ -1.02
PDGFC-203ENST00000502773 MAP3K12Q12852 859 aa8.71□□□□□ -1.02
PDGFC-203ENST00000502773 JMYQ8N9B5 988 aa8.71□□□□□ -1.02
PDGFC-203ENST00000502773 TTC14Q96N46 770 aa8.71□□□□□ -1.02
PDGFC-203ENST00000502773 CARMIL3Q8ND23 1372 aa8.7□□□□□ -1.02
PDGFC-203ENST00000502773 HSPA2P54652 639 aa8.7□□□□□ -1.02
PDGFC-203ENST00000502773 TRIM29Q14134 588 aa8.7□□□□□ -1.02
PDGFC-203ENST00000502773 CCDC152Q4G0S7 254 aa8.7□□□□□ -1.02
PDGFC-203ENST00000502773 USPL1Q5W0Q7 1092 aa8.7□□□□□ -1.02
PDGFC-203ENST00000502773 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-203ENST00000502773 TMTC2Q8N394 836 aa8.7□□□□□ -1.02
PDGFC-203ENST00000502773 TRMT112Q9UI30 125 aaKnown RBP8.7□□□□□ -1.02
PDGFC-203ENST00000502773 HOOK1Q9UJC3 728 aaKnown RBP8.7□□□□□ -1.02
PDGFC-203ENST00000502773 COL5A2P05997 1499 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-203ENST00000502773 ERICH2A1L162 156 aa8.7□□□□□ -1.02
PDGFC-203ENST00000502773 ATP2B3Q16720 1220 aa8.7□□□□□ -1.02
PDGFC-203ENST00000502773 LDHAL6AQ6ZMR3 332 aa8.7□□□□□ -1.02
PDGFC-203ENST00000502773 ZFP91Q96JP5 570 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-203ENST00000502773 RNF41Q9H4P4 317 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-203ENST00000502773 ZBTB3Q9H5J0 574 aa8.7□□□□□ -1.02
PDGFC-203ENST00000502773 SCN11AQ9UI33 1791 aa8.7□□□□□ -1.02
PDGFC-203ENST00000502773 RPAP1Q9BWH6 1393 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-203ENST00000502773 ELP1O95163 1332 aa8.7□□□□□ -1.02
PDGFC-203ENST00000502773 CCDC73Q6ZRK6 1079 aa8.7□□□□□ -1.02
PDGFC-203ENST00000502773 CCDC83Q8IWF9 413 aa8.7□□□□□ -1.02
PDGFC-203ENST00000502773 NCOA7Q8NI08 942 aa8.7□□□□□ -1.02
PDGFC-203ENST00000502773 ZNF274Q96GC6 653 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-203ENST00000502773 NAT10Q9H0A0 1025 aaKnown RBP8.7□□□□□ -1.02
PDGFC-203ENST00000502773 CNNM2Q9H8M5 875 aa8.7□□□□□ -1.02
PDGFC-203ENST00000502773 ZGPATQ8N5A5 531 aaKnown RBP8.69□□□□□ -1.02
PDGFC-203ENST00000502773 APPBP2Q92624 585 aa8.69□□□□□ -1.02
PDGFC-203ENST00000502773 BTG4Q9NY30 223 aa8.69□□□□□ -1.02
PDGFC-203ENST00000502773 CCDC196A0A1B0GTZ2 297 aa8.69□□□□□ -1.02
PDGFC-203ENST00000502773 TAF5LO75529 589 aa8.69□□□□□ -1.02
PDGFC-203ENST00000502773 SYT1P21579 422 aa8.69□□□□□ -1.02
PDGFC-203ENST00000502773 PPP2R5BQ15173 497 aa8.69□□□□□ -1.02
PDGFC-203ENST00000502773 DDB1Q16531 1140 aa8.69□□□□□ -1.02
PDGFC-203ENST00000502773 NAA16Q6N069 864 aaPredicted RBP8.69□□□□□ -1.02
PDGFC-203ENST00000502773 SASS6Q6UVJ0 657 aa8.69□□□□□ -1.02
PDGFC-203ENST00000502773 ZSCAN30Q86W11 494 aa8.69□□□□□ -1.02
PDGFC-203ENST00000502773 UNC5CLQ8IV45 518 aa8.69□□□□□ -1.02
PDGFC-203ENST00000502773 CD2BP2O95400 341 aaKnown RBP8.69□□□□□ -1.02
PDGFC-203ENST00000502773 ZMYM1Q5SVZ6 1142 aa8.69□□□□□ -1.02
PDGFC-203ENST00000502773 MTA3Q9BTC8 594 aa8.69□□□□□ -1.02
PDGFC-203ENST00000502773 UTP14AQ9BVJ6 771 aaKnown RBP8.69□□□□□ -1.02
PDGFC-203ENST00000502773 PKD1L3Q7Z443 1732 aa8.69□□□□□ -1.02
PDGFC-203ENST00000502773 A0A1B0GUL7 405 aa8.69□□□□□ -1.02
PDGFC-203ENST00000502773 ESPNB1AK53 854 aa8.69□□□□□ -1.02
PDGFC-203ENST00000502773 GOLIM4O00461 696 aa8.69□□□□□ -1.02
PDGFC-203ENST00000502773 ZNF213O14771 459 aa8.69□□□□□ -1.02
PDGFC-203ENST00000502773 XBP1P17861 261 aa8.69□□□□□ -1.02
PDGFC-203ENST00000502773 GNL2Q13823 731 aaKnown RBP8.69□□□□□ -1.02
PDGFC-203ENST00000502773 SPATA32Q96LK8 384 aa8.69□□□□□ -1.02
PDGFC-203ENST00000502773 PPP1R9BQ96SB3 815 aa8.69□□□□□ -1.02
PDGFC-203ENST00000502773 SLC3A2P08195 630 aaKnown RBP8.68□□□□□ -1.02
PDGFC-203ENST00000502773 RFX5P48382 616 aaPredicted RBP8.68□□□□□ -1.02
PDGFC-203ENST00000502773 SAFBQ15424 915 aaKnown RBP eCLIP8.68□□□□□ -1.02
PDGFC-203ENST00000502773 NYXQ9GZU5 481 aa8.68□□□□□ -1.02
PDGFC-203ENST00000502773 MED23Q9ULK4 1368 aa8.68□□□□□ -1.02
PDGFC-203ENST00000502773 GTF2E1P29083 439 aaPredicted RBP8.68□□□□□ -1.02
PDGFC-203ENST00000502773 FKBP4Q02790 459 aaKnown RBP eCLIP8.68□□□□□ -1.02
PDGFC-203ENST00000502773 SF3A1Q15459 793 aaKnown RBP8.68□□□□□ -1.02
PDGFC-203ENST00000502773 DBNLQ9UJU6 430 aaKnown RBP8.68□□□□□ -1.02
PDGFC-203ENST00000502773 PALD1Q9ULE6 856 aa8.68□□□□□ -1.02
PDGFC-203ENST00000502773 CCDC9Q9Y3X0 531 aaKnown RBP8.68□□□□□ -1.02
PDGFC-203ENST00000502773 CLCN1P35523 988 aa8.68□□□□□ -1.02
PDGFC-203ENST00000502773 CHAF1AQ13111 956 aaPredicted RBP8.68□□□□□ -1.02
PDGFC-203ENST00000502773 MTERF4Q7Z6M4 381 aaKnown RBP8.68□□□□□ -1.02
PDGFC-203ENST00000502773 DZIP3Q86Y13 1208 aaKnown RBP8.68□□□□□ -1.02
PDGFC-203ENST00000502773 LPIN2Q92539 896 aa8.68□□□□□ -1.02
PDGFC-203ENST00000502773 SYTL4Q96C24 671 aaPredicted RBP8.68□□□□□ -1.02
PDGFC-203ENST00000502773 DBNDD2Q9BQY9 259 aa8.68□□□□□ -1.02
PDGFC-203ENST00000502773 IRS4O14654 1257 aaPredicted RBP8.67□□□□□ -1.02
PDGFC-203ENST00000502773 A1BGP04217 495 aa8.67□□□□□ -1.02
PDGFC-203ENST00000502773 FOXO4P98177 505 aa8.67□□□□□ -1.02
PDGFC-203ENST00000502773 UBE3CQ15386 1083 aa8.67□□□□□ -1.02
PDGFC-203ENST00000502773 PUM3Q15397 648 aaKnown RBP8.67□□□□□ -1.02
PDGFC-203ENST00000502773 MAP3K11Q16584 847 aa8.67□□□□□ -1.02
PDGFC-203ENST00000502773 AMOTL1Q8IY63 956 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms