RNA–Protein interactions for RNA: ENST00000502254.5

PTPN20-212, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-212ENST00000502254 MIS18AQ9NYP9 233 aa7.2□□□□□ -1.26
PTPN20-212ENST00000502254 THRAP3Q9Y2W1 955 aaKnown RBP7.2□□□□□ -1.26
PTPN20-212ENST00000502254 OVOS2A0A0G2JMS6 1433 aa7.19□□□□□ -1.26
PTPN20-212ENST00000502254 BCL9LQ86UU0 1499 aa7.19□□□□□ -1.26
PTPN20-212ENST00000502254 HSP90AB1P08238 724 aaKnown RBP7.19□□□□□ -1.26
PTPN20-212ENST00000502254 PTPN5P54829 565 aa7.19□□□□□ -1.26
PTPN20-212ENST00000502254 EXOSC9Q06265 439 aaKnown RBP7.19□□□□□ -1.26
PTPN20-212ENST00000502254 TEFQ10587 303 aa7.19□□□□□ -1.26
PTPN20-212ENST00000502254 SH3RF1Q7Z6J0 888 aa7.19□□□□□ -1.26
PTPN20-212ENST00000502254 TRMT2AQ8IZ69 625 aaKnown RBP7.19□□□□□ -1.26
PTPN20-212ENST00000502254 FAM174AQ8TBP5 190 aa7.19□□□□□ -1.26
PTPN20-212ENST00000502254 VRTNQ9H8Y1 702 aa7.19□□□□□ -1.26
PTPN20-212ENST00000502254 QTRT2Q9H974 415 aaKnown RBP7.19□□□□□ -1.26
PTPN20-212ENST00000502254 PCDH11XQ9BZA7 1347 aa7.19□□□□□ -1.26
PTPN20-212ENST00000502254 PCDH11YQ9BZA8 1340 aa7.19□□□□□ -1.26
PTPN20-212ENST00000502254 FANCIQ9NVI1 1328 aa7.19□□□□□ -1.26
PTPN20-212ENST00000502254 PLCH1Q4KWH8 1693 aa7.19□□□□□ -1.26
PTPN20-212ENST00000502254 FAM208AQ9UK61 1670 aaKnown RBP7.19□□□□□ -1.26
PTPN20-212ENST00000502254 TMEM88BA6NKF7 163 aa7.18□□□□□ -1.26
PTPN20-212ENST00000502254 ZNF853P0CG23 659 aa7.18□□□□□ -1.26
PTPN20-212ENST00000502254 CABP4P57796 275 aa7.18□□□□□ -1.26
PTPN20-212ENST00000502254 ELOAQ14241 798 aaKnown RBP7.18□□□□□ -1.26
PTPN20-212ENST00000502254 TAF7Q15545 349 aaPredicted RBP7.18□□□□□ -1.26
PTPN20-212ENST00000502254 DDB1Q16531 1140 aa7.18□□□□□ -1.26
PTPN20-212ENST00000502254 ADAM32Q8TC27 787 aa7.18□□□□□ -1.26
PTPN20-212ENST00000502254 CDCA7Q9BWT1 371 aaPredicted RBP7.18□□□□□ -1.26
PTPN20-212ENST00000502254 MBIPQ9NS73 344 aa7.18□□□□□ -1.26
PTPN20-212ENST00000502254 TSPYL4Q9UJ04 414 aa7.18□□□□□ -1.26
PTPN20-212ENST00000502254 TRPC5Q9UL62 973 aaPredicted RBP7.18□□□□□ -1.26
PTPN20-212ENST00000502254 SUPT16HQ9Y5B9 1047 aaKnown RBP7.18□□□□□ -1.26
PTPN20-212ENST00000502254 DISP2A7MBM2 1401 aa7.18□□□□□ -1.26
PTPN20-212ENST00000502254 USP17L3A6NCW0 530 aa7.17□□□□□ -1.26
PTPN20-212ENST00000502254 USP17L4A6NCW7 530 aa7.17□□□□□ -1.26
PTPN20-212ENST00000502254 BTBD11A6QL63 1104 aa7.17□□□□□ -1.26
PTPN20-212ENST00000502254 ELL2O00472 640 aaPredicted RBP7.17□□□□□ -1.26
PTPN20-212ENST00000502254 CHL1O00533 1208 aa7.17□□□□□ -1.26
PTPN20-212ENST00000502254 LZTS3O60299 673 aaPredicted RBP7.17□□□□□ -1.26
PTPN20-212ENST00000502254 SKIP12755 728 aa7.17□□□□□ -1.26
PTPN20-212ENST00000502254 USP17L2Q6R6M4 530 aa7.17□□□□□ -1.26
PTPN20-212ENST00000502254 USP17L1Q7RTZ2 530 aa7.17□□□□□ -1.26
PTPN20-212ENST00000502254 CCDC24Q8N4L8 307 aa7.17□□□□□ -1.26
PTPN20-212ENST00000502254 NKX2-3Q8TAU0 364 aa7.17□□□□□ -1.26
PTPN20-212ENST00000502254 DCAF5Q96JK2 942 aa7.17□□□□□ -1.26
PTPN20-212ENST00000502254 ARHGAP9Q9BRR9 750 aa7.17□□□□□ -1.26
PTPN20-212ENST00000502254 RCAN3Q9UKA8 241 aa7.17□□□□□ -1.26
PTPN20-212ENST00000502254 USP17L5A8MUK1 530 aa7.16□□□□□ -1.26
PTPN20-212ENST00000502254 BRD1O95696 1058 aa7.16□□□□□ -1.26
PTPN20-212ENST00000502254 POTEGQ6S5H5 508 aa7.16□□□□□ -1.26
PTPN20-212ENST00000502254 SLC52A2Q9HAB3 445 aa7.16□□□□□ -1.26
PTPN20-212ENST00000502254 PCDHB9Q9Y5E1 797 aa7.16□□□□□ -1.26
PTPN20-212ENST00000502254 CEMIPQ8WUJ3 1361 aa7.16□□□□□ -1.26
PTPN20-212ENST00000502254 PLEKHG2Q9H7P9 1386 aa7.16□□□□□ -1.26
PTPN20-212ENST00000502254 ATRNO75882 1429 aa7.16□□□□□ -1.26
PTPN20-212ENST00000502254 NRAPQ86VF7 1730 aa7.15□□□□□ -1.26
PTPN20-212ENST00000502254 TCERG1O14776 1098 aaKnown RBP7.15□□□□□ -1.26
PTPN20-212ENST00000502254 KCNQ3O43525 872 aa7.15□□□□□ -1.26
PTPN20-212ENST00000502254 S1PR4O95977 384 aa7.15□□□□□ -1.26
PTPN20-212ENST00000502254 SLC39A6Q13433 755 aa7.15□□□□□ -1.26
PTPN20-212ENST00000502254 KRT24Q2M2I5 525 aa7.15□□□□□ -1.26
PTPN20-212ENST00000502254 SLFNL1Q499Z3 407 aa7.15□□□□□ -1.26
PTPN20-212ENST00000502254 ZNF772Q68DY9 489 aaPredicted RBP7.15□□□□□ -1.26
PTPN20-212ENST00000502254 ZBTB33Q86T24 672 aa7.15□□□□□ -1.26
PTPN20-212ENST00000502254 SEPT12Q8IYM1 358 aa7.15□□□□□ -1.26
PTPN20-212ENST00000502254 TSPYL6Q8N831 410 aa7.15□□□□□ -1.26
PTPN20-212ENST00000502254 MARCH10Q8NA82 808 aaPredicted RBP7.15□□□□□ -1.26
PTPN20-212ENST00000502254 C8orf58Q8NAV2 365 aa7.15□□□□□ -1.26
PTPN20-212ENST00000502254 BAP1Q92560 729 aa7.15□□□□□ -1.26
PTPN20-212ENST00000502254 SYTL4Q96C24 671 aaPredicted RBP7.15□□□□□ -1.26
PTPN20-212ENST00000502254 ACSBG1Q96GR2 724 aa7.15□□□□□ -1.26
PTPN20-212ENST00000502254 KDM6AO15550 1401 aaPredicted RBP7.15□□□□□ -1.27
PTPN20-212ENST00000502254 NWD2Q9ULI1 1742 aa7.15□□□□□ -1.27
PTPN20-212ENST00000502254 ERVV-2B6SEH9 535 aa7.14□□□□□ -1.27
PTPN20-212ENST00000502254 BCAR3O75815 825 aa7.14□□□□□ -1.27
PTPN20-212ENST00000502254 RARSP54136 660 aaKnown RBP7.14□□□□□ -1.27
PTPN20-212ENST00000502254 IRX6P78412 446 aaPredicted RBP7.14□□□□□ -1.27
PTPN20-212ENST00000502254 TWISTNBQ3B726 338 aaPredicted RBP7.14□□□□□ -1.27
PTPN20-212ENST00000502254 MAP7D1Q3KQU3 841 aa7.14□□□□□ -1.27
PTPN20-212ENST00000502254 C4orf48Q5BLP8 95 aa7.14□□□□□ -1.27
PTPN20-212ENST00000502254 TNS2Q63HR2 1409 aa7.14□□□□□ -1.27
PTPN20-212ENST00000502254 TRAF7Q6Q0C0 670 aa7.14□□□□□ -1.27
PTPN20-212ENST00000502254 BPHLQ86WA6 291 aaPredicted RBP7.14□□□□□ -1.27
PTPN20-212ENST00000502254 RNF135Q8IUD6 432 aa7.14□□□□□ -1.27
PTPN20-212ENST00000502254 ZNF511Q8NB15 262 aa7.14□□□□□ -1.27
PTPN20-212ENST00000502254 BCL2L13Q9BXK5 485 aa7.14□□□□□ -1.27
PTPN20-212ENST00000502254 BABAM1Q9NWV8 329 aa7.14□□□□□ -1.27
PTPN20-212ENST00000502254 TMOD3Q9NYL9 352 aa7.14□□□□□ -1.27
PTPN20-212ENST00000502254 PARP4Q9UKK3 1724 aaKnown RBP7.14□□□□□ -1.27
PTPN20-212ENST00000502254 FCF1Q9Y324 198 aaKnown RBP7.14□□□□□ -1.27
PTPN20-212ENST00000502254 CARNS1A5YM72 827 aa7.13□□□□□ -1.27
PTPN20-212ENST00000502254 FAM196BA6NMK8 535 aa7.13□□□□□ -1.27
PTPN20-212ENST00000502254 PATL2C9JE40 543 aaKnown RBP7.13□□□□□ -1.27
PTPN20-212ENST00000502254 PLIN1O60240 522 aa7.13□□□□□ -1.27
PTPN20-212ENST00000502254 VAMP4O75379 141 aa7.13□□□□□ -1.27
PTPN20-212ENST00000502254 NEFLP07196 543 aa7.13□□□□□ -1.27
PTPN20-212ENST00000502254 CT47B1P0C2W7 299 aaPredicted RBP7.13□□□□□ -1.27
PTPN20-212ENST00000502254 EIF4A1P60842 406 aaKnown RBP7.13□□□□□ -1.27
PTPN20-212ENST00000502254 RBM6P78332 1123 aaKnown RBP7.13□□□□□ -1.27
PTPN20-212ENST00000502254 KCNA1Q09470 495 aa7.13□□□□□ -1.27
PTPN20-212ENST00000502254 FAM182BQ5T319 152 aa7.13□□□□□ -1.27
PTPN20-212ENST00000502254 TTC5Q8N0Z6 440 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms