RNA–Protein interactions for RNA: ENST00000495406.1

CDK5RAP2-219, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 635 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-219	ENST00000495406	KIF4B	Q2VIQ3	1234 aa		13.82	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	PLBD2	Q8NHP8	589 aa		13.82	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	AKAP11	Q9UKA4	1901 aa		13.82	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	RPS8	P62241	208 aa	Known RBP	13.81	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	KRT24	Q2M2I5	525 aa		13.81	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	HDGFL1	Q5TGJ6	251 aa		13.81	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	GGA3	Q9NZ52	723 aa		13.81	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	ANKIB1	Q9P2G1	1089 aa		13.81	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	DUOX1	Q9NRD9	1551 aa		13.8	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	TNRC18	O15417	2968 aa	Predicted RBP	13.8	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	TBC1D16	Q8TBP0	767 aa		13.8	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	CSRNP1	Q96S65	589 aa		13.8	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	DBF4	Q9UBU7	674 aa	Predicted RBP	13.8	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	PDE4DIP	Q5VU43	2346 aa		13.79	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	IRS4	O14654	1257 aa	Predicted RBP	13.79	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	VIL1	P09327	827 aa	Known RBP	13.79	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	CDCA5	Q96FF9	252 aa		13.79	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	ISCA1	Q9BUE6	129 aa		13.79	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	RTL9	Q8NET4	1388 aa		13.79	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	LRRC37A	A6NMS7	1700 aa		13.78	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	DDX60	Q8IY21	1712 aa	Known RBP	13.78	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	CHL1	O00533	1208 aa		13.78	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	UFL1	O94874	794 aa		13.78	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	SLC10A3	P09131	477 aa		13.78	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	SCARF1	Q14162	830 aa		13.78	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	ANGEL2	Q5VTE6	544 aa	Known RBP	13.78	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	CTU1	Q7Z7A3	348 aa	Known RBP	13.78	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	REM2	Q8IYK8	340 aa	Predicted RBP	13.78	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	HYPK	Q9NX55	129 aa		13.78	□□□□□ -0.2
CDK5RAP2-219	ENST00000495406	ASTN2	O75129	1339 aa	Predicted RBP	13.77	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	HSP90B1	P14625	803 aa	Known RBP	13.77	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	RIC3	Q7Z5B4	369 aa		13.77	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	CCDC146	Q8IYE0	955 aa		13.77	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	GGA1	Q9UJY5	639 aa		13.77	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	HDAC9	Q9UKV0	1011 aa		13.77	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	AGBL3	Q8NEM8	1001 aa		13.76	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	SEC31B	Q9NQW1	1179 aa		13.76	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	USP17L8	P0C7I0	530 aa		13.75	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	FKBP1B	P68106	108 aa		13.75	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.75	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.75	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	PODXL2	Q9NZ53	605 aa		13.75	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	HOXB7	P09629	217 aa		13.74	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	ZNF280A	P59817	542 aa	Predicted RBP	13.74	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	GOLGA2	Q08379	1002 aa		13.74	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	TRIM28	Q13263	835 aa	Known RBP	13.74	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	TTLL12	Q14166	644 aa	Predicted RBP	13.74	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	RALBP1	Q15311	655 aa		13.74	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	CCDC152	Q4G0S7	254 aa		13.74	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	DUSP27	Q5VZP5	1158 aa		13.74	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	RASAL3	Q86YV0	1011 aa		13.74	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.74	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	MYOZ2	Q9NPC6	264 aa		13.74	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	SCAF8	Q9UPN6	1271 aa	Known RBP	13.74	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	SCN9A	Q15858	1988 aa		13.74	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	UBE2Q2L	H0YL09	131 aa		13.73	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	TBC1D8	O95759	1140 aa		13.73	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	PKN2	Q16513	984 aa	Known RBP	13.73	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	MOB2	Q70IA6	237 aa		13.73	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	RUNDC1	Q96C34	613 aa		13.73	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	TRIM35	Q9UPQ4	493 aa		13.73	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	HPS5	Q9UPZ3	1129 aa		13.73	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	COL4A1	P02462	1669 aa		13.72	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	USP17L3	A6NCW0	530 aa		13.72	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	USP17L4	A6NCW7	530 aa		13.72	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	WDR43	Q15061	677 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	PRPF38B	Q5VTL8	546 aa	Known RBP	13.72	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	PRAMEF18	Q5VWM3	479 aa		13.72	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	USP17L1	Q7RTZ2	530 aa		13.72	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	ANKRD18A	Q8IVF6	992 aa		13.72	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	JARID2	Q92833	1246 aa	Predicted RBP	13.72	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	MYD88	Q99836	296 aa		13.72	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	XDH	P47989	1333 aa		13.71	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	ELL2	O00472	640 aa	Predicted RBP	13.71	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	PDE8A	O60658	829 aa		13.71	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	NF2	P35240	595 aa		13.71	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	PODN	Q7Z5L7	613 aa		13.71	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	OGFOD1	Q8N543	542 aa		13.71	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.71	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	FBXW7	Q969H0	707 aa		13.71	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	PHAX	Q9H814	394 aa	Known RBP	13.71	□□□□□ -0.21
CDK5RAP2-219	ENST00000495406	PITPNM2	Q9BZ72	1349 aa		13.7	□□□□□ -0.22
CDK5RAP2-219	ENST00000495406	ATP2B4	P23634	1241 aa		13.7	□□□□□ -0.22
CDK5RAP2-219	ENST00000495406	MKRN3	Q13064	507 aa	Known RBP	13.7	□□□□□ -0.22
CDK5RAP2-219	ENST00000495406	NBPF9	Q3BBW0	867 aa		13.7	□□□□□ -0.22
CDK5RAP2-219	ENST00000495406	CCDC191	Q8NCU4	936 aa		13.7	□□□□□ -0.22
CDK5RAP2-219	ENST00000495406	PAPPA2	Q9BXP8	1791 aa		13.69	□□□□□ -0.22
CDK5RAP2-219	ENST00000495406	PCCA	P05165	728 aa	Predicted RBP	13.69	□□□□□ -0.22
CDK5RAP2-219	ENST00000495406	GML	Q99445	158 aa		13.69	□□□□□ -0.22
CDK5RAP2-219	ENST00000495406	MBIP	Q9NS73	344 aa		13.69	□□□□□ -0.22
CDK5RAP2-219	ENST00000495406	CWC25	Q9NXE8	425 aa	Predicted RBP	13.69	□□□□□ -0.22
CDK5RAP2-219	ENST00000495406	TM4SF4	P48230	202 aa		13.68	□□□□□ -0.22
CDK5RAP2-219	ENST00000495406	PRKG1	Q13976	671 aa		13.68	□□□□□ -0.22
CDK5RAP2-219	ENST00000495406	CDC5L	Q99459	802 aa	Known RBP	13.68	□□□□□ -0.22
CDK5RAP2-219	ENST00000495406	GPR25	O00155	361 aa		13.67	□□□□□ -0.22
CDK5RAP2-219	ENST00000495406	DDX58	O95786	925 aa	Known RBP	13.67	□□□□□ -0.22
CDK5RAP2-219	ENST00000495406	SREBF2	Q12772	1141 aa		13.67	□□□□□ -0.22
CDK5RAP2-219	ENST00000495406	MXD3	Q9BW11	206 aa		13.67	□□□□□ -0.22
CDK5RAP2-219	ENST00000495406	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.67	□□□□□ -0.22
CDK5RAP2-219	ENST00000495406	ADAMTS8	Q9UP79	889 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms