RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 XKR5Q6UX68 686 aa4.16□□□□□ -1.74
LMNB1-207ENST00000494185 OR13H1Q8NG92 308 aa4.16□□□□□ -1.74
LMNB1-207ENST00000494185 ELP3Q9H9T3 547 aa4.16□□□□□ -1.74
LMNB1-207ENST00000494185 PRDM6Q9NQX0 595 aa4.16□□□□□ -1.74
LMNB1-207ENST00000494185 PPP4R2Q9NY27 417 aa4.16□□□□□ -1.74
LMNB1-207ENST00000494185 AMOTL2Q9Y2J4 779 aa4.16□□□□□ -1.74
LMNB1-207ENST00000494185 USP20Q9Y2K6 914 aa4.16□□□□□ -1.74
LMNB1-207ENST00000494185 M0R082 166 aa4.15□□□□□ -1.75
LMNB1-207ENST00000494185 C2CD2LO14523 706 aa4.15□□□□□ -1.75
LMNB1-207ENST00000494185 APBA3O96018 575 aa4.15□□□□□ -1.75
LMNB1-207ENST00000494185 TARSP26639 723 aaKnown RBP4.15□□□□□ -1.75
LMNB1-207ENST00000494185 GRNP28799 593 aaKnown RBP4.15□□□□□ -1.75
LMNB1-207ENST00000494185 TRIP4Q15650 581 aaPredicted RBP4.15□□□□□ -1.75
LMNB1-207ENST00000494185 CCDC27Q2M243 656 aa4.15□□□□□ -1.75
LMNB1-207ENST00000494185 PSAPL1Q6NUJ1 521 aa4.15□□□□□ -1.75
LMNB1-207ENST00000494185 FCHSD1Q86WN1 690 aa4.15□□□□□ -1.75
LMNB1-207ENST00000494185 DTWD1Q8N5C7 304 aa4.15□□□□□ -1.75
LMNB1-207ENST00000494185 ZNF417Q8TAU3 575 aa4.15□□□□□ -1.75
LMNB1-207ENST00000494185 DDX54Q8TDD1 881 aaKnown RBP4.15□□□□□ -1.75
LMNB1-207ENST00000494185 BTBD6Q96KE9 485 aa4.15□□□□□ -1.75
LMNB1-207ENST00000494185 ZNF587Q96SQ5 575 aaPredicted RBP4.15□□□□□ -1.75
LMNB1-207ENST00000494185 RBCK1Q9BYM8 510 aa4.15□□□□□ -1.75
LMNB1-207ENST00000494185 DNAJC25Q9H1X3 360 aa4.15□□□□□ -1.75
LMNB1-207ENST00000494185 ZFYVE1Q9HBF4 777 aa4.15□□□□□ -1.75
LMNB1-207ENST00000494185 CCDC87Q9NVE4 849 aa4.15□□□□□ -1.75
LMNB1-207ENST00000494185 ADAMTS8Q9UP79 889 aa4.15□□□□□ -1.75
LMNB1-207ENST00000494185 KCNMB2Q9Y691 235 aa4.15□□□□□ -1.75
LMNB1-207ENST00000494185 LOC102724428A0A0B4J2F2 783 aa4.14□□□□□ -1.75
LMNB1-207ENST00000494185 MMP20O60882 483 aa4.14□□□□□ -1.75
LMNB1-207ENST00000494185 CPNE3O75131 537 aaKnown RBP4.14□□□□□ -1.75
LMNB1-207ENST00000494185 SPATA31C1P0DKV0 1188 aa4.14□□□□□ -1.75
LMNB1-207ENST00000494185 CPB1P15086 417 aa4.14□□□□□ -1.75
LMNB1-207ENST00000494185 PTPRAP18433 802 aa4.14□□□□□ -1.75
LMNB1-207ENST00000494185 DGKGP49619 791 aa4.14□□□□□ -1.75
LMNB1-207ENST00000494185 ARL4DP49703 201 aa4.14□□□□□ -1.75
LMNB1-207ENST00000494185 SIK1P57059 783 aa4.14□□□□□ -1.75
LMNB1-207ENST00000494185 TRIM28Q13263 835 aaKnown RBP4.14□□□□□ -1.75
LMNB1-207ENST00000494185 GRIN2CQ14957 1233 aa4.14□□□□□ -1.75
LMNB1-207ENST00000494185 HP1BP3Q5SSJ5 553 aaPredicted RBP4.14□□□□□ -1.75
LMNB1-207ENST00000494185 WFDC8Q8IUA0 241 aa4.14□□□□□ -1.75
LMNB1-207ENST00000494185 GJD3Q8N144 294 aa4.14□□□□□ -1.75
LMNB1-207ENST00000494185 TTC9Q92623 222 aa4.14□□□□□ -1.75
LMNB1-207ENST00000494185 NSUN5Q96P11 429 aaKnown RBP4.14□□□□□ -1.75
LMNB1-207ENST00000494185 HCN2Q9UL51 889 aa4.14□□□□□ -1.75
LMNB1-207ENST00000494185 ARHGEF15O94989 841 aa4.13□□□□□ -1.75
LMNB1-207ENST00000494185 NRG1Q02297 640 aaPredicted RBP4.13□□□□□ -1.75
LMNB1-207ENST00000494185 TRAPPC3LQ5T215 181 aa4.13□□□□□ -1.75
LMNB1-207ENST00000494185 DIEXFQ68CQ4 756 aaKnown RBP4.13□□□□□ -1.75
LMNB1-207ENST00000494185 PLD4Q96BZ4 506 aa4.13□□□□□ -1.75
LMNB1-207ENST00000494185 FAM129BQ96TA1 746 aa4.13□□□□□ -1.75
LMNB1-207ENST00000494185 GGNBP2Q9H3C7 697 aa4.13□□□□□ -1.75
LMNB1-207ENST00000494185 NLRP2Q9NX02 1062 aa4.13□□□□□ -1.75
LMNB1-207ENST00000494185 PODXL2Q9NZ53 605 aa4.13□□□□□ -1.75
LMNB1-207ENST00000494185 TRAK1Q9UPV9 953 aa4.13□□□□□ -1.75
LMNB1-207ENST00000494185 A6NHS1 94 aa4.12□□□□□ -1.75
LMNB1-207ENST00000494185 SHISA8B8ZZ34 492 aa4.12□□□□□ -1.75
LMNB1-207ENST00000494185 TNFRSF21O75509 655 aa4.12□□□□□ -1.75
LMNB1-207ENST00000494185 LCE2CQ5TA81 110 aa4.12□□□□□ -1.75
LMNB1-207ENST00000494185 TMC7Q7Z402 723 aa4.12□□□□□ -1.75
LMNB1-207ENST00000494185 FBF1Q8TES7 1133 aa4.12□□□□□ -1.75
LMNB1-207ENST00000494185 ALKBH8Q96BT7 664 aaKnown RBP4.12□□□□□ -1.75
LMNB1-207ENST00000494185 ASB16Q96NS5 453 aa4.12□□□□□ -1.75
LMNB1-207ENST00000494185 SMG9Q9H0W8 520 aaKnown RBP4.12□□□□□ -1.75
LMNB1-207ENST00000494185 KIF4AO95239 1232 aa4.11□□□□□ -1.75
LMNB1-207ENST00000494185 MFAP1P55081 439 aaKnown RBP4.11□□□□□ -1.75
LMNB1-207ENST00000494185 MLLT1Q03111 559 aaPredicted RBP4.11□□□□□ -1.75
LMNB1-207ENST00000494185 ALG1LQ6GMV1 187 aa4.11□□□□□ -1.75
LMNB1-207ENST00000494185 TMEM151AQ8N4L1 468 aa4.11□□□□□ -1.75
LMNB1-207ENST00000494185 WHAMMQ8TF30 809 aa4.11□□□□□ -1.75
LMNB1-207ENST00000494185 NUDT8Q8WV74 236 aa4.11□□□□□ -1.75
LMNB1-207ENST00000494185 WNT8BQ93098 351 aa4.11□□□□□ -1.75
LMNB1-207ENST00000494185 TMEM63CQ9P1W3 806 aa4.11□□□□□ -1.75
LMNB1-207ENST00000494185 ZFATQ9P243 1243 aa4.11□□□□□ -1.75
LMNB1-207ENST00000494185 CCDC9Q9Y3X0 531 aaKnown RBP4.11□□□□□ -1.75
LMNB1-207ENST00000494185 GIPC1O14908 333 aa4.1□□□□□ -1.75
LMNB1-207ENST00000494185 GPR182O15218 404 aa4.1□□□□□ -1.75
LMNB1-207ENST00000494185 IGHA1P01876 353 aa4.1□□□□□ -1.75
LMNB1-207ENST00000494185 ALBP02768 609 aa4.1□□□□□ -1.75
LMNB1-207ENST00000494185 XRCC5P13010 732 aaKnown RBP4.1□□□□□ -1.75
LMNB1-207ENST00000494185 ELNP15502 786 aa4.1□□□□□ -1.75
LMNB1-207ENST00000494185 CDC27P30260 824 aa4.1□□□□□ -1.75
LMNB1-207ENST00000494185 IRS1P35568 1242 aa4.1□□□□□ -1.75
LMNB1-207ENST00000494185 PLCB3Q01970 1234 aa4.1□□□□□ -1.75
LMNB1-207ENST00000494185 KCNMA1Q12791 1236 aa4.1□□□□□ -1.75
LMNB1-207ENST00000494185 COL19A1Q14993 1142 aa4.1□□□□□ -1.75
LMNB1-207ENST00000494185 PERM1Q5SV97 790 aa4.1□□□□□ -1.75
LMNB1-207ENST00000494185 CEP135Q66GS9 1140 aa4.1□□□□□ -1.75
LMNB1-207ENST00000494185 MSL1Q68DK7 614 aa4.1□□□□□ -1.75
LMNB1-207ENST00000494185 GDF6Q6KF10 455 aaPredicted RBP4.1□□□□□ -1.75
LMNB1-207ENST00000494185 FRMD6Q96NE9 622 aa4.1□□□□□ -1.75
LMNB1-207ENST00000494185 LPIN3Q9BQK8 851 aa4.1□□□□□ -1.75
LMNB1-207ENST00000494185 PBX4Q9BYU1 374 aa4.1□□□□□ -1.75
LMNB1-207ENST00000494185 SRCIN1Q9C0H9 1055 aa4.1□□□□□ -1.75
LMNB1-207ENST00000494185 NIF3L1Q9GZT8 377 aa4.1□□□□□ -1.75
LMNB1-207ENST00000494185 SPG7Q9UQ90 795 aa4.1□□□□□ -1.75
LMNB1-207ENST00000494185 PPME1Q9Y570 386 aa4.1□□□□□ -1.75
LMNB1-207ENST00000494185 ANKRD33BA6NCL7 494 aa4.09□□□□□ -1.75
LMNB1-207ENST00000494185 C9orf172C9J069 976 aa4.09□□□□□ -1.75
LMNB1-207ENST00000494185 PDE2AO00408 941 aaPredicted RBP4.09□□□□□ -1.75
LMNB1-207ENST00000494185 TREHO43280 583 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms