RNA–Protein interactions for RNA: ENST00000493415.5

A1CF-210, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 926 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-210ENST00000493415 SCN9AQ15858 1988 aa7.6□□□□□ -1.19
A1CF-210ENST00000493415 EIF2S2P20042 333 aaKnown RBP7.59□□□□□ -1.19
A1CF-210ENST00000493415 RPS12P25398 132 aaKnown RBP7.59□□□□□ -1.19
A1CF-210ENST00000493415 DOK7Q18PE1 504 aa7.59□□□□□ -1.19
A1CF-210ENST00000493415 FBXO46Q6PJ61 603 aaPredicted RBP7.59□□□□□ -1.19
A1CF-210ENST00000493415 DPF2Q92785 391 aa7.59□□□□□ -1.19
A1CF-210ENST00000493415 EYA3Q99504 573 aa7.59□□□□□ -1.19
A1CF-210ENST00000493415 THUMPD2Q9BTF0 503 aaKnown RBP7.59□□□□□ -1.19
A1CF-210ENST00000493415 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.59□□□□□ -1.19
A1CF-210ENST00000493415 NSFL1CQ9UNZ2 370 aaKnown RBP7.59□□□□□ -1.19
A1CF-210ENST00000493415 PSME4Q14997 1843 aa7.59□□□□□ -1.19
A1CF-210ENST00000493415 RBBP6Q7Z6E9 1792 aaKnown RBP7.59□□□□□ -1.2
A1CF-210ENST00000493415 ASTN2O75129 1339 aaPredicted RBP7.58□□□□□ -1.2
A1CF-210ENST00000493415 SPDYE2BA6NHP3 402 aa7.58□□□□□ -1.2
A1CF-210ENST00000493415 GPR25O00155 361 aa7.58□□□□□ -1.2
A1CF-210ENST00000493415 SPDYE6P0CI01 402 aa7.58□□□□□ -1.2
A1CF-210ENST00000493415 AIMP1Q12904 312 aaKnown RBP7.58□□□□□ -1.2
A1CF-210ENST00000493415 SPDYE2Q495Y8 402 aa7.58□□□□□ -1.2
A1CF-210ENST00000493415 HSP90AB3PQ58FF7 597 aa7.58□□□□□ -1.2
A1CF-210ENST00000493415 ANGEL2Q5VTE6 544 aaKnown RBP7.58□□□□□ -1.2
A1CF-210ENST00000493415 TMC4Q7Z404 712 aa7.58□□□□□ -1.2
A1CF-210ENST00000493415 TRMT112Q9UI30 125 aaKnown RBP7.58□□□□□ -1.2
A1CF-210ENST00000493415 SPEF2Q9C093 1822 aa7.57□□□□□ -1.2
A1CF-210ENST00000493415 ERBB4Q15303 1308 aa7.57□□□□□ -1.2
A1CF-210ENST00000493415 SH3TC1Q8TE82 1336 aa7.57□□□□□ -1.2
A1CF-210ENST00000493415 HTATSF1O43719 755 aaKnown RBP7.57□□□□□ -1.2
A1CF-210ENST00000493415 FKTNO75072 461 aa7.57□□□□□ -1.2
A1CF-210ENST00000493415 ANXA1P04083 346 aa7.57□□□□□ -1.2
A1CF-210ENST00000493415 EIF4A1P60842 406 aaKnown RBP7.57□□□□□ -1.2
A1CF-210ENST00000493415 MOB2Q70IA6 237 aa7.57□□□□□ -1.2
A1CF-210ENST00000493415 NECTIN2Q92692 538 aa7.57□□□□□ -1.2
A1CF-210ENST00000493415 SCAF8Q9UPN6 1271 aaKnown RBP7.57□□□□□ -1.2
A1CF-210ENST00000493415 TRIM17Q9Y577 477 aa7.57□□□□□ -1.2
A1CF-210ENST00000493415 RTL9Q8NET4 1388 aa7.57□□□□□ -1.2
A1CF-210ENST00000493415 UBE2Q2LH0YL09 131 aa7.56□□□□□ -1.2
A1CF-210ENST00000493415 NF2P35240 595 aa7.56□□□□□ -1.2
A1CF-210ENST00000493415 FKBP1BP68106 108 aa7.56□□□□□ -1.2
A1CF-210ENST00000493415 GPSM2P81274 684 aa7.56□□□□□ -1.2
A1CF-210ENST00000493415 SREBF2Q12772 1141 aa7.56□□□□□ -1.2
A1CF-210ENST00000493415 TCIRG1Q13488 830 aa7.56□□□□□ -1.2
A1CF-210ENST00000493415 SCARF1Q14162 830 aa7.56□□□□□ -1.2
A1CF-210ENST00000493415 SLC10A5Q5PT55 438 aa7.56□□□□□ -1.2
A1CF-210ENST00000493415 FBXW7Q969H0 707 aa7.56□□□□□ -1.2
A1CF-210ENST00000493415 KCNQ5Q9NR82 932 aa7.56□□□□□ -1.2
A1CF-210ENST00000493415 TSPYL4Q9UJ04 414 aa7.56□□□□□ -1.2
A1CF-210ENST00000493415 MAPK8IP3Q9UPT6 1336 aa7.55□□□□□ -1.2
A1CF-210ENST00000493415 POTEFA5A3E0 1075 aa7.55□□□□□ -1.2
A1CF-210ENST00000493415 PER1O15534 1290 aaPredicted RBP7.55□□□□□ -1.2
A1CF-210ENST00000493415 UFL1O94874 794 aa7.55□□□□□ -1.2
A1CF-210ENST00000493415 PRKG1Q13976 671 aa7.55□□□□□ -1.2
A1CF-210ENST00000493415 PRAMEF18Q5VWM3 479 aa7.55□□□□□ -1.2
A1CF-210ENST00000493415 NLRP10Q86W26 655 aa7.55□□□□□ -1.2
A1CF-210ENST00000493415 CELF1Q92879 486 aaKnown RBP7.55□□□□□ -1.2
A1CF-210ENST00000493415 ZC3H12CQ9C0D7 883 aaKnown RBP7.55□□□□□ -1.2
A1CF-210ENST00000493415 ANKIB1Q9P2G1 1089 aa7.55□□□□□ -1.2
A1CF-210ENST00000493415 POLLQ9UGP5 575 aa7.55□□□□□ -1.2
A1CF-210ENST00000493415 SSUH2Q9Y2M2 353 aa7.55□□□□□ -1.2
A1CF-210ENST00000493415 CLSPNQ9HAW4 1339 aa7.54□□□□□ -1.2
A1CF-210ENST00000493415 COL4A1P02462 1669 aa7.54□□□□□ -1.2
A1CF-210ENST00000493415 FXR1P51114 621 aaKnown RBP eCLIP7.54□□□□□ -1.2
A1CF-210ENST00000493415 TRIM26Q12899 539 aaPredicted RBP7.54□□□□□ -1.2
A1CF-210ENST00000493415 PROSER3Q2NL68 480 aa7.54□□□□□ -1.2
A1CF-210ENST00000493415 RTL5Q5HYW3 569 aaPredicted RBP7.54□□□□□ -1.2
A1CF-210ENST00000493415 RSBN1LQ6PCB5 846 aaPredicted RBP7.54□□□□□ -1.2
A1CF-210ENST00000493415 XAGE3Q8WTP9 111 aa7.54□□□□□ -1.2
A1CF-210ENST00000493415 MYOZ2Q9NPC6 264 aa7.54□□□□□ -1.2
A1CF-210ENST00000493415 VIL1P09327 827 aaKnown RBP7.53□□□□□ -1.2
A1CF-210ENST00000493415 USP17L8P0C7I0 530 aa7.53□□□□□ -1.2
A1CF-210ENST00000493415 INTS3Q68E01 1043 aaKnown RBP7.53□□□□□ -1.2
A1CF-210ENST00000493415 COPS6Q7L5N1 327 aa7.53□□□□□ -1.2
A1CF-210ENST00000493415 ARMC9Q7Z3E5 817 aa7.53□□□□□ -1.2
A1CF-210ENST00000493415 TBC1D16Q8TBP0 767 aa7.53□□□□□ -1.2
A1CF-210ENST00000493415 GGA1Q9UJY5 639 aa7.53□□□□□ -1.2
A1CF-210ENST00000493415 KIAA0100Q14667 2235 aaKnown RBP7.53□□□□□ -1.2
A1CF-210ENST00000493415 PITPNM2Q9BZ72 1349 aa7.52□□□□□ -1.2
A1CF-210ENST00000493415 ALDH1A1P00352 501 aa7.52□□□□□ -1.21
A1CF-210ENST00000493415 TM4SF4P48230 202 aa7.52□□□□□ -1.21
A1CF-210ENST00000493415 NFE2L2Q16236 605 aa7.52□□□□□ -1.21
A1CF-210ENST00000493415 NOM1Q5C9Z4 860 aaKnown RBP7.52□□□□□ -1.21
A1CF-210ENST00000493415 OTOP1Q7RTM1 612 aa7.52□□□□□ -1.21
A1CF-210ENST00000493415 AGBL3Q8NEM8 1001 aa7.52□□□□□ -1.21
A1CF-210ENST00000493415 FAM89AQ96GI7 184 aa7.52□□□□□ -1.21
A1CF-210ENST00000493415 TMEM106CQ9BVX2 250 aa7.52□□□□□ -1.21
A1CF-210ENST00000493415 ANGEL1Q9UNK9 670 aaKnown RBP7.52□□□□□ -1.21
A1CF-210ENST00000493415 ECM29Q5VYK3 1845 aa7.52□□□□□ -1.21
A1CF-210ENST00000493415 ZNF609O15014 1411 aa7.52□□□□□ -1.21
A1CF-210ENST00000493415 MYH3P11055 1940 aa7.51□□□□□ -1.21
A1CF-210ENST00000493415 ATP5J2-PTCD1G3V325 749 aa7.51□□□□□ -1.21
A1CF-210ENST00000493415 SASH1O94885 1247 aa7.51□□□□□ -1.21
A1CF-210ENST00000493415 MYCP01106 439 aaPredicted RBP7.51□□□□□ -1.21
A1CF-210ENST00000493415 EN2P19622 333 aaPredicted RBP7.51□□□□□ -1.21
A1CF-210ENST00000493415 PPP2R1AP30153 589 aa7.51□□□□□ -1.21
A1CF-210ENST00000493415 ZNF280AP59817 542 aaPredicted RBP7.51□□□□□ -1.21
A1CF-210ENST00000493415 SLC4A8Q2Y0W8 1093 aa7.51□□□□□ -1.21
A1CF-210ENST00000493415 OGFOD1Q8N543 542 aa7.51□□□□□ -1.21
A1CF-210ENST00000493415 CD99L2Q8TCZ2 262 aa7.51□□□□□ -1.21
A1CF-210ENST00000493415 ERO1AQ96HE7 468 aa7.51□□□□□ -1.21
A1CF-210ENST00000493415 CCDC85AQ96PX6 553 aaPredicted RBP7.51□□□□□ -1.21
A1CF-210ENST00000493415 R3HDMLQ9H3Y0 253 aa7.51□□□□□ -1.21
A1CF-210ENST00000493415 FBXO3Q9UK99 471 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms