RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 ANGEL2Q5VTE6 544 aaKnown RBP18.3■□□□□ 0.52
ATG4B-222ENST00000491867 MOB2Q70IA6 237 aa18.3■□□□□ 0.52
ATG4B-222ENST00000491867 UBE2Q2LH0YL09 131 aa18.29■□□□□ 0.52
ATG4B-222ENST00000491867 VIL1P09327 827 aaKnown RBP18.29■□□□□ 0.52
ATG4B-222ENST00000491867 GPSM2P81274 684 aa18.29■□□□□ 0.52
ATG4B-222ENST00000491867 ZNF428Q96B54 188 aa18.29■□□□□ 0.52
ATG4B-222ENST00000491867 EIF2S2P20042 333 aaKnown RBP18.28■□□□□ 0.52
ATG4B-222ENST00000491867 HSP90AB3PQ58FF7 597 aa18.28■□□□□ 0.52
ATG4B-222ENST00000491867 NOM1Q5C9Z4 860 aaKnown RBP18.28■□□□□ 0.52
ATG4B-222ENST00000491867 CELF1Q92879 486 aaKnown RBP18.28■□□□□ 0.52
ATG4B-222ENST00000491867 EYA3Q99504 573 aa18.28■□□□□ 0.52
ATG4B-222ENST00000491867 LRRC37AA6NMS7 1700 aa18.28■□□□□ 0.52
ATG4B-222ENST00000491867 PAPPA2Q9BXP8 1791 aa18.27■□□□□ 0.52
ATG4B-222ENST00000491867 TM4SF4P48230 202 aa18.27■□□□□ 0.52
ATG4B-222ENST00000491867 FXR1P51114 621 aaKnown RBP eCLIP18.27■□□□□ 0.52
ATG4B-222ENST00000491867 ZNF280AP59817 542 aaPredicted RBP18.27■□□□□ 0.52
ATG4B-222ENST00000491867 SCN9AQ15858 1988 aa18.26■□□□□ 0.51
ATG4B-222ENST00000491867 FKTNO75072 461 aa18.26■□□□□ 0.51
ATG4B-222ENST00000491867 AIMP1Q12904 312 aaKnown RBP18.26■□□□□ 0.51
ATG4B-222ENST00000491867 TCIRG1Q13488 830 aa18.26■□□□□ 0.51
ATG4B-222ENST00000491867 R3HDMLQ9H3Y0 253 aa18.26■□□□□ 0.51
ATG4B-222ENST00000491867 SCAF8Q9UPN6 1271 aaKnown RBP18.26■□□□□ 0.51
ATG4B-222ENST00000491867 POTEFA5A3E0 1075 aa18.25■□□□□ 0.51
ATG4B-222ENST00000491867 MKRN3Q13064 507 aaKnown RBP18.25■□□□□ 0.51
ATG4B-222ENST00000491867 COPS6Q7L5N1 327 aa18.25■□□□□ 0.51
ATG4B-222ENST00000491867 TBC1D16Q8TBP0 767 aa18.25■□□□□ 0.51
ATG4B-222ENST00000491867 BRCA2P51587 3418 aa18.25■□□□□ 0.51
ATG4B-222ENST00000491867 SZT2Q5T011 3432 aa18.25■□□□□ 0.51
ATG4B-222ENST00000491867 NEFMP07197 916 aa18.24■□□□□ 0.51
ATG4B-222ENST00000491867 PPP2R1AP30153 589 aa18.24■□□□□ 0.51
ATG4B-222ENST00000491867 PRAMEF18Q5VWM3 479 aa18.24■□□□□ 0.51
ATG4B-222ENST00000491867 XAGE3Q8WTP9 111 aa18.24■□□□□ 0.51
ATG4B-222ENST00000491867 ZC3H12CQ9C0D7 883 aaKnown RBP18.24■□□□□ 0.51
ATG4B-222ENST00000491867 G3V3G9 751 aa18.23■□□□□ 0.51
ATG4B-222ENST00000491867 TTLL12Q14166 644 aaPredicted RBP18.23■□□□□ 0.51
ATG4B-222ENST00000491867 DCAF8Q5TAQ9 597 aa18.23■□□□□ 0.51
ATG4B-222ENST00000491867 RSBN1LQ6PCB5 846 aaPredicted RBP18.23■□□□□ 0.51
ATG4B-222ENST00000491867 AGBL3Q8NEM8 1001 aa18.23■□□□□ 0.51
ATG4B-222ENST00000491867 TSPYL4Q9UJ04 414 aa18.23■□□□□ 0.51
ATG4B-222ENST00000491867 DLG5Q8TDM6 1919 aa18.23■□□□□ 0.51
ATG4B-222ENST00000491867 PITPNM2Q9BZ72 1349 aa18.23■□□□□ 0.51
ATG4B-222ENST00000491867 SF3B3Q15393 1217 aaKnown RBP18.22■□□□□ 0.51
ATG4B-222ENST00000491867 NECTIN2Q92692 538 aa18.22■□□□□ 0.51
ATG4B-222ENST00000491867 MYOZ2Q9NPC6 264 aa18.22■□□□□ 0.51
ATG4B-222ENST00000491867 DDX60Q8IY21 1712 aaKnown RBP18.21■□□□□ 0.51
ATG4B-222ENST00000491867 SREBF2Q12772 1141 aa18.21■□□□□ 0.51
ATG4B-222ENST00000491867 NFE2L2Q16236 605 aa18.21■□□□□ 0.51
ATG4B-222ENST00000491867 FAM89AQ96GI7 184 aa18.21■□□□□ 0.51
ATG4B-222ENST00000491867 CFHR5Q9BXR6 569 aa18.21■□□□□ 0.51
ATG4B-222ENST00000491867 RANBP2P49792 3224 aaKnown RBP18.21■□□□□ 0.51
ATG4B-222ENST00000491867 COL4A1P02462 1669 aa18.2■□□□□ 0.5
ATG4B-222ENST00000491867 UFL1O94874 794 aa18.2■□□□□ 0.5
ATG4B-222ENST00000491867 USP17L8P0C7I0 530 aa18.2■□□□□ 0.5
ATG4B-222ENST00000491867 RPS8P62241 208 aaKnown RBP18.2■□□□□ 0.5
ATG4B-222ENST00000491867 INTS3Q68E01 1043 aaKnown RBP18.2■□□□□ 0.5
ATG4B-222ENST00000491867 GMLQ99445 158 aa18.2■□□□□ 0.5
ATG4B-222ENST00000491867 TRIM17Q9Y577 477 aa18.2■□□□□ 0.5
ATG4B-222ENST00000491867 ZNF609O15014 1411 aa18.18■□□□□ 0.5
ATG4B-222ENST00000491867 RTL5Q5HYW3 569 aaPredicted RBP18.18■□□□□ 0.5
ATG4B-222ENST00000491867 OTOP1Q7RTM1 612 aa18.18■□□□□ 0.5
ATG4B-222ENST00000491867 PODXL2Q9NZ53 605 aa18.18■□□□□ 0.5
ATG4B-222ENST00000491867 ANKIB1Q9P2G1 1089 aa18.18■□□□□ 0.5
ATG4B-222ENST00000491867 EN2P19622 333 aaPredicted RBP18.17■□□□□ 0.5
ATG4B-222ENST00000491867 PTPN12Q05209 780 aaKnown RBP18.17■□□□□ 0.5
ATG4B-222ENST00000491867 NBPF9Q3BBW0 867 aa18.17■□□□□ 0.5
ATG4B-222ENST00000491867 PLEKHF1Q96S99 279 aa18.17■□□□□ 0.5
ATG4B-222ENST00000491867 GGA1Q9UJY5 639 aa18.17■□□□□ 0.5
ATG4B-222ENST00000491867 ATP5J2-PTCD1G3V325 749 aa18.16■□□□□ 0.5
ATG4B-222ENST00000491867 NF2P35240 595 aa18.16■□□□□ 0.5
ATG4B-222ENST00000491867 COLQQ9Y215 455 aaPredicted RBP18.16■□□□□ 0.5
ATG4B-222ENST00000491867 ALDH1A1P00352 501 aa18.15■□□□□ 0.5
ATG4B-222ENST00000491867 PRKG1Q13976 671 aa18.15■□□□□ 0.5
ATG4B-222ENST00000491867 USP17L3A6NCW0 530 aa18.14■□□□□ 0.49
ATG4B-222ENST00000491867 USP17L4A6NCW7 530 aa18.14■□□□□ 0.49
ATG4B-222ENST00000491867 IRS4O14654 1257 aaPredicted RBP18.14■□□□□ 0.49
ATG4B-222ENST00000491867 SPRYD7Q5W111 196 aa18.14■□□□□ 0.49
ATG4B-222ENST00000491867 USP17L1Q7RTZ2 530 aa18.14■□□□□ 0.49
ATG4B-222ENST00000491867 ARMC9Q7Z3E5 817 aa18.14■□□□□ 0.49
ATG4B-222ENST00000491867 ISCA1Q9BUE6 129 aa18.14■□□□□ 0.49
ATG4B-222ENST00000491867 SEC31BQ9NQW1 1179 aa18.14■□□□□ 0.49
ATG4B-222ENST00000491867 PLBD2Q8NHP8 589 aa18.13■□□□□ 0.49
ATG4B-222ENST00000491867 LDLRAD1Q5T700 205 aa18.12■□□□□ 0.49
ATG4B-222ENST00000491867 ARMC5Q96C12 935 aa18.12■□□□□ 0.49
ATG4B-222ENST00000491867 PTPN22Q9Y2R2 807 aa18.12■□□□□ 0.49
ATG4B-222ENST00000491867 WNT10BO00744 389 aa18.11■□□□□ 0.49
ATG4B-222ENST00000491867 ANKRD13DQ6ZTN6 518 aa18.11■□□□□ 0.49
ATG4B-222ENST00000491867 IFNL1Q8IU54 200 aa18.11■□□□□ 0.49
ATG4B-222ENST00000491867 MXD3Q9BW11 206 aa18.11■□□□□ 0.49
ATG4B-222ENST00000491867 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-222ENST00000491867 CHPF2Q9P2E5 772 aa18.11■□□□□ 0.49
ATG4B-222ENST00000491867 MAPK8IP3Q9UPT6 1336 aa18.11■□□□□ 0.49
ATG4B-222ENST00000491867 PSME4Q14997 1843 aa18.11■□□□□ 0.49
ATG4B-222ENST00000491867 MANSC4A6NHS7 340 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-222ENST00000491867 KRT24Q2M2I5 525 aa18.1■□□□□ 0.49
ATG4B-222ENST00000491867 PODNQ7Z5L7 613 aa18.1■□□□□ 0.49
ATG4B-222ENST00000491867 OGFOD1Q8N543 542 aa18.1■□□□□ 0.49
ATG4B-222ENST00000491867 CD99L2Q8TCZ2 262 aa18.1■□□□□ 0.49
ATG4B-222ENST00000491867 ERO1AQ96HE7 468 aa18.1■□□□□ 0.49
ATG4B-222ENST00000491867 BABAM1Q9NWV8 329 aa18.1■□□□□ 0.49
ATG4B-222ENST00000491867 ANGEL1Q9UNK9 670 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms