RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 GRIK5Q16478 980 aa8.93□□□□□ -0.98
SMARCC1-207ENST00000485833 TRAPPC3LQ5T215 181 aa8.93□□□□□ -0.98
SMARCC1-207ENST00000485833 ZNF438Q7Z4V0 828 aa8.93□□□□□ -0.98
SMARCC1-207ENST00000485833 RBSNQ9H1K0 784 aa8.93□□□□□ -0.98
SMARCC1-207ENST00000485833 MSTNO14793 375 aa8.92□□□□□ -0.98
SMARCC1-207ENST00000485833 SERPINB4P48594 390 aa8.92□□□□□ -0.98
SMARCC1-207ENST00000485833 TRIM28Q13263 835 aaKnown RBP8.92□□□□□ -0.98
SMARCC1-207ENST00000485833 AAMPQ13685 434 aa8.92□□□□□ -0.98
SMARCC1-207ENST00000485833 XKR5Q6UX68 686 aa8.92□□□□□ -0.98
SMARCC1-207ENST00000485833 PLD4Q96BZ4 506 aa8.92□□□□□ -0.98
SMARCC1-207ENST00000485833 ELP3Q9H9T3 547 aa8.92□□□□□ -0.98
SMARCC1-207ENST00000485833 TMEM63CQ9P1W3 806 aa8.92□□□□□ -0.98
SMARCC1-207ENST00000485833 POLIQ9UNA4 740 aa8.92□□□□□ -0.98
SMARCC1-207ENST00000485833 ICMTO60725 284 aa8.91□□□□□ -0.98
SMARCC1-207ENST00000485833 PROCP04070 461 aa8.91□□□□□ -0.98
SMARCC1-207ENST00000485833 HYAL2Q12891 473 aa8.91□□□□□ -0.98
SMARCC1-207ENST00000485833 C8orf34Q49A92 452 aa8.91□□□□□ -0.98
SMARCC1-207ENST00000485833 MSL1Q68DK7 614 aa8.91□□□□□ -0.98
SMARCC1-207ENST00000485833 TTC16Q8NEE8 873 aa8.91□□□□□ -0.98
SMARCC1-207ENST00000485833 SPOCK3Q9BQ16 436 aa8.91□□□□□ -0.98
SMARCC1-207ENST00000485833 GGNBP2Q9H3C7 697 aa8.91□□□□□ -0.98
SMARCC1-207ENST00000485833 A0A0A0MRY4 1105 aa8.9□□□□□ -0.98
SMARCC1-207ENST00000485833 C1QTNF9BB2RNN3 333 aa8.9□□□□□ -0.98
SMARCC1-207ENST00000485833 H3BRB1 525 aa8.9□□□□□ -0.98
SMARCC1-207ENST00000485833 FZD6O60353 706 aa8.9□□□□□ -0.98
SMARCC1-207ENST00000485833 CHRNA4P43681 627 aa8.9□□□□□ -0.98
SMARCC1-207ENST00000485833 COL13A1Q5TAT6 717 aaPredicted RBP8.9□□□□□ -0.98
SMARCC1-207ENST00000485833 ILDR2Q71H61 639 aa8.9□□□□□ -0.98
SMARCC1-207ENST00000485833 CD163Q86VB7 1156 aa8.9□□□□□ -0.98
SMARCC1-207ENST00000485833 TXNDC2Q86VQ3 553 aa8.9□□□□□ -0.98
SMARCC1-207ENST00000485833 TUT1Q9H6E5 874 aaKnown RBP8.9□□□□□ -0.98
SMARCC1-207ENST00000485833 A6NHS1 94 aa8.89□□□□□ -0.99
SMARCC1-207ENST00000485833 KIF4AO95239 1232 aa8.89□□□□□ -0.99
SMARCC1-207ENST00000485833 CYP2E1P05181 493 aaPredicted RBP8.89□□□□□ -0.99
SMARCC1-207ENST00000485833 USP5P45974 858 aa8.89□□□□□ -0.99
SMARCC1-207ENST00000485833 RAC1P63000 192 aa8.89□□□□□ -0.99
SMARCC1-207ENST00000485833 WFDC8Q8IUA0 241 aa8.89□□□□□ -0.99
SMARCC1-207ENST00000485833 GLYCTKQ8IVS8 523 aa8.89□□□□□ -0.99
SMARCC1-207ENST00000485833 DMRTC2Q8IXT2 367 aaPredicted RBP8.89□□□□□ -0.99
SMARCC1-207ENST00000485833 SPACA7Q96KW9 195 aa8.88□□□□□ -0.99
SMARCC1-207ENST00000485833 APBA3O96018 575 aa8.87□□□□□ -0.99
SMARCC1-207ENST00000485833 ELNP15502 786 aa8.87□□□□□ -0.99
SMARCC1-207ENST00000485833 EHHADHQ08426 723 aa8.87□□□□□ -0.99
SMARCC1-207ENST00000485833 FMR1NBQ8N0W7 255 aaPredicted RBP8.87□□□□□ -0.99
SMARCC1-207ENST00000485833 DTWD1Q8N5C7 304 aa8.87□□□□□ -0.99
SMARCC1-207ENST00000485833 NACC1Q96RE7 527 aa8.87□□□□□ -0.99
SMARCC1-207ENST00000485833 CCDC87Q9NVE4 849 aa8.87□□□□□ -0.99
SMARCC1-207ENST00000485833 CNTN3Q9P232 1028 aa8.87□□□□□ -0.99
SMARCC1-207ENST00000485833 GRIK4Q16099 956 aa8.86□□□□□ -0.99
SMARCC1-207ENST00000485833 GDF6Q6KF10 455 aaPredicted RBP8.86□□□□□ -0.99
SMARCC1-207ENST00000485833 GJD3Q8N144 294 aa8.86□□□□□ -0.99
SMARCC1-207ENST00000485833 C1orf127Q8N9H9 656 aa8.86□□□□□ -0.99
SMARCC1-207ENST00000485833 CCER1Q8TC90 406 aaPredicted RBP8.86□□□□□ -0.99
SMARCC1-207ENST00000485833 KANSL3Q9P2N6 904 aa8.86□□□□□ -0.99
SMARCC1-207ENST00000485833 ATP11AP98196 1134 aa8.85□□□□□ -0.99
SMARCC1-207ENST00000485833 ECM1Q16610 540 aa8.85□□□□□ -0.99
SMARCC1-207ENST00000485833 NCAPG2Q86XI2 1143 aa8.85□□□□□ -0.99
SMARCC1-207ENST00000485833 TRIM33Q9UPN9 1127 aa8.85□□□□□ -0.99
SMARCC1-207ENST00000485833 SMNDC1O75940 238 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMARCC1-207ENST00000485833 BRD1O95696 1058 aa8.84□□□□□ -0.99
SMARCC1-207ENST00000485833 CES1P23141 567 aa8.84□□□□□ -0.99
SMARCC1-207ENST00000485833 BAG6P46379 1132 aa8.84□□□□□ -0.99
SMARCC1-207ENST00000485833 CACTIN-AS1Q8N1I8 211 aa8.84□□□□□ -0.99
SMARCC1-207ENST00000485833 SNX29Q8TEQ0 813 aa8.84□□□□□ -0.99
SMARCC1-207ENST00000485833 RASSF4Q9H2L5 321 aa8.84□□□□□ -0.99
SMARCC1-207ENST00000485833 CHRDQ9H2X0 955 aa8.84□□□□□ -0.99
SMARCC1-207ENST00000485833 TNFRSF21O75509 655 aa8.83□□□□□ -1
SMARCC1-207ENST00000485833 ARHGAP4P98171 946 aa8.83□□□□□ -1
SMARCC1-207ENST00000485833 CEP135Q66GS9 1140 aa8.83□□□□□ -1
SMARCC1-207ENST00000485833 FBXO11Q86XK2 927 aa8.83□□□□□ -1
SMARCC1-207ENST00000485833 IL22RA1Q8N6P7 574 aa8.83□□□□□ -1
SMARCC1-207ENST00000485833 CEP120Q8N960 986 aa8.83□□□□□ -1
SMARCC1-207ENST00000485833 PMEPA1Q969W9 287 aa8.83□□□□□ -1
SMARCC1-207ENST00000485833 SALL4Q9UJQ4 1053 aa8.83□□□□□ -1
SMARCC1-207ENST00000485833 BRPF3Q9ULD4 1205 aa8.83□□□□□ -1
SMARCC1-207ENST00000485833 PHACTR2O75167 634 aa8.82□□□□□ -1
SMARCC1-207ENST00000485833 SELPP16109 830 aa8.82□□□□□ -1
SMARCC1-207ENST00000485833 PBX4Q9BYU1 374 aa8.82□□□□□ -1
SMARCC1-207ENST00000485833 GNEQ9Y223 722 aaKnown RBP8.82□□□□□ -1
SMARCC1-207ENST00000485833 C9orf172C9J069 976 aa8.81□□□□□ -1
SMARCC1-207ENST00000485833 NDUFB5O43674 189 aa8.81□□□□□ -1
SMARCC1-207ENST00000485833 FOXD3Q9UJU5 478 aaPredicted RBP8.81□□□□□ -1
SMARCC1-207ENST00000485833 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.81□□□□□ -1
SMARCC1-207ENST00000485833 DEAF1O75398 565 aaPredicted RBP8.8□□□□□ -1
SMARCC1-207ENST00000485833 GATA4P43694 442 aa8.8□□□□□ -1
SMARCC1-207ENST00000485833 SHISA2Q6UWI4 295 aa8.8□□□□□ -1
SMARCC1-207ENST00000485833 LENG1Q96BZ8 264 aaPredicted RBP8.8□□□□□ -1
SMARCC1-207ENST00000485833 LACRTQ9GZZ8 138 aa8.8□□□□□ -1
SMARCC1-207ENST00000485833 MUC3BQ9H195 1237 aa8.8□□□□□ -1
SMARCC1-207ENST00000485833 SRA1Q9HD15 236 aaKnown RBP8.8□□□□□ -1
SMARCC1-207ENST00000485833 SOWAHDA6NJG2 315 aa8.79□□□□□ -1
SMARCC1-207ENST00000485833 EREGO14944 169 aa8.79□□□□□ -1
SMARCC1-207ENST00000485833 ACPPP15309 386 aa8.79□□□□□ -1
SMARCC1-207ENST00000485833 ADGRE1Q14246 886 aa8.79□□□□□ -1
SMARCC1-207ENST00000485833 PPME1Q9Y570 386 aa8.79□□□□□ -1
SMARCC1-207ENST00000485833 CDC27P30260 824 aa8.78□□□□□ -1
SMARCC1-207ENST00000485833 NRG1Q02297 640 aaPredicted RBP8.78□□□□□ -1
SMARCC1-207ENST00000485833 MBTPS1Q14703 1052 aa8.78□□□□□ -1
SMARCC1-207ENST00000485833 MAP4K3Q8IVH8 894 aa8.78□□□□□ -1
SMARCC1-207ENST00000485833 DZANK1Q9NVP4 752 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms