RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 COL4A5P29400 1685 aa22.33■■□□□ 1.16
SREBF1-213ENST00000485080 DZIP1LQ8IYY4 767 aaKnown RBP22.32■■□□□ 1.16
SREBF1-213ENST00000485080 EYA3Q99504 573 aa22.32■■□□□ 1.16
SREBF1-213ENST00000485080 ANKRD2Q9GZV1 360 aa22.32■■□□□ 1.16
SREBF1-213ENST00000485080 ANKIB1Q9P2G1 1089 aa22.32■■□□□ 1.16
SREBF1-213ENST00000485080 GGA1Q9UJY5 639 aa22.32■■□□□ 1.16
SREBF1-213ENST00000485080 CHMP3Q9Y3E7 222 aa22.32■■□□□ 1.16
SREBF1-213ENST00000485080 ATP2B4P23634 1241 aa22.31■■□□□ 1.16
SREBF1-213ENST00000485080 AOC3Q16853 763 aa22.31■■□□□ 1.16
SREBF1-213ENST00000485080 CLUAP1Q96AJ1 413 aa22.31■■□□□ 1.16
SREBF1-213ENST00000485080 MEIS3Q99687 375 aa22.31■■□□□ 1.16
SREBF1-213ENST00000485080 C6orf229H3BNL8 230 aa22.3■■□□□ 1.16
SREBF1-213ENST00000485080 MS4A1P11836 297 aa22.3■■□□□ 1.16
SREBF1-213ENST00000485080 WASHC4Q2M389 1173 aa22.3■■□□□ 1.16
SREBF1-213ENST00000485080 NIM1KQ8IY84 436 aa22.3■■□□□ 1.16
SREBF1-213ENST00000485080 TMEM57Q8N5G2 664 aa22.3■■□□□ 1.16
SREBF1-213ENST00000485080 FTSJ3Q8IY81 847 aaKnown RBP22.29■■□□□ 1.16
SREBF1-213ENST00000485080 ZNF526Q8TF50 670 aaPredicted RBP22.29■■□□□ 1.16
SREBF1-213ENST00000485080 ZNRF3Q9ULT6 936 aa22.29■■□□□ 1.16
SREBF1-213ENST00000485080 LEMD3Q9Y2U8 911 aa22.29■■□□□ 1.16
SREBF1-213ENST00000485080 UFL1O94874 794 aa22.28■■□□□ 1.16
SREBF1-213ENST00000485080 LDHAL6AQ6ZMR3 332 aa22.28■■□□□ 1.16
SREBF1-213ENST00000485080 L3MBTL3Q96JM7 780 aaPredicted RBP22.28■■□□□ 1.16
SREBF1-213ENST00000485080 SPEF2Q9C093 1822 aa22.27■■□□□ 1.16
SREBF1-213ENST00000485080 RLBP1P12271 317 aa22.27■■□□□ 1.16
SREBF1-213ENST00000485080 EIF6P56537 245 aaKnown RBP22.27■■□□□ 1.16
SREBF1-213ENST00000485080 CHRNDQ07001 517 aa22.27■■□□□ 1.16
SREBF1-213ENST00000485080 TAF7LQ5H9L4 462 aa22.27■■□□□ 1.16
SREBF1-213ENST00000485080 GPC2Q8N158 579 aa22.27■■□□□ 1.16
SREBF1-213ENST00000485080 WDR90Q96KV7 1748 aa22.27■■□□□ 1.16
SREBF1-213ENST00000485080 ZC3H12CQ9C0D7 883 aaKnown RBP22.27■■□□□ 1.16
SREBF1-213ENST00000485080 LRRFIP2Q9Y608 721 aaKnown RBP22.27■■□□□ 1.16
SREBF1-213ENST00000485080 ZNF541Q9H0D2 1346 aa22.27■■□□□ 1.16
SREBF1-213ENST00000485080 KIF3CO14782 793 aa22.26■■□□□ 1.15
SREBF1-213ENST00000485080 RFX5P48382 616 aaPredicted RBP22.26■■□□□ 1.15
SREBF1-213ENST00000485080 MTX1Q13505 466 aa22.26■■□□□ 1.15
SREBF1-213ENST00000485080 ZNF594Q96JF6 807 aaPredicted RBP22.26■■□□□ 1.15
SREBF1-213ENST00000485080 NMRK2Q9NPI5 230 aa22.26■■□□□ 1.15
SREBF1-213ENST00000485080 RIPOR2Q9Y4F9 1068 aa22.26■■□□□ 1.15
SREBF1-213ENST00000485080 MED23Q9ULK4 1368 aa22.25■■□□□ 1.15
SREBF1-213ENST00000485080 DDNO94850 711 aaPredicted RBP22.25■■□□□ 1.15
SREBF1-213ENST00000485080 GNAI2P04899 355 aa22.24■■□□□ 1.15
SREBF1-213ENST00000485080 VEGFAP15692 232 aaPredicted RBP22.24■■□□□ 1.15
SREBF1-213ENST00000485080 C15orf52Q6ZUT6 534 aaKnown RBP22.24■■□□□ 1.15
SREBF1-213ENST00000485080 YTHDC1Q96MU7 727 aaKnown RBP22.24■■□□□ 1.15
SREBF1-213ENST00000485080 CNNM1Q9NRU3 951 aa22.24■■□□□ 1.15
SREBF1-213ENST00000485080 FBXO3Q9UK99 471 aa22.24■■□□□ 1.15
SREBF1-213ENST00000485080 ZNF804BA4D1E1 1349 aa22.24■■□□□ 1.15
SREBF1-213ENST00000485080 POTECB2RU33 542 aa22.23■■□□□ 1.15
SREBF1-213ENST00000485080 ZBTB7BO15156 539 aaPredicted RBP22.23■■□□□ 1.15
SREBF1-213ENST00000485080 PTPN12Q05209 780 aaKnown RBP22.23■■□□□ 1.15
SREBF1-213ENST00000485080 RRAGCQ9HB90 399 aa22.23■■□□□ 1.15
SREBF1-213ENST00000485080 MROH5Q6ZUA9 1318 aa22.23■■□□□ 1.15
SREBF1-213ENST00000485080 YDJCA8MPS7 323 aa22.22■■□□□ 1.15
SREBF1-213ENST00000485080 RIMBP2O15034 1052 aa22.22■■□□□ 1.15
SREBF1-213ENST00000485080 CXCL9Q07325 125 aa22.22■■□□□ 1.15
SREBF1-213ENST00000485080 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.22■■□□□ 1.15
SREBF1-213ENST00000485080 GPR101Q96P66 508 aaPredicted RBP22.22■■□□□ 1.15
SREBF1-213ENST00000485080 A0A1B0GUL6 1792 aa22.21■■□□□ 1.15
SREBF1-213ENST00000485080 PDE3AQ14432 1141 aa22.21■■□□□ 1.15
SREBF1-213ENST00000485080 TNIP1Q15025 636 aa22.21■■□□□ 1.15
SREBF1-213ENST00000485080 ITPRIPQ8IWB1 547 aa22.21■■□□□ 1.15
SREBF1-213ENST00000485080 PANK1Q8TE04 598 aa22.21■■□□□ 1.15
SREBF1-213ENST00000485080 PUS3Q9BZE2 481 aaKnown RBP22.21■■□□□ 1.15
SREBF1-213ENST00000485080 IRS2Q9Y4H2 1338 aa22.21■■□□□ 1.15
SREBF1-213ENST00000485080 SCN4AP35499 1836 aa22.2■■□□□ 1.14
SREBF1-213ENST00000485080 IQCA1LA6NCM1 817 aa22.2■■□□□ 1.14
SREBF1-213ENST00000485080 WTIPA6NIX2 430 aaPredicted RBP22.2■■□□□ 1.14
SREBF1-213ENST00000485080 ECE2O60344 883 aa22.2■■□□□ 1.14
SREBF1-213ENST00000485080 CIAPIN1Q6FI81 312 aa22.2■■□□□ 1.14
SREBF1-213ENST00000485080 PODNQ7Z5L7 613 aa22.2■■□□□ 1.14
SREBF1-213ENST00000485080 DBNDD1Q9H9R9 158 aa22.2■■□□□ 1.14
SREBF1-213ENST00000485080 COPRSQ9NQ92 184 aa22.2■■□□□ 1.14
SREBF1-213ENST00000485080 EYA2O00167 538 aa22.19■■□□□ 1.14
SREBF1-213ENST00000485080 CIAO1O76071 339 aa22.19■■□□□ 1.14
SREBF1-213ENST00000485080 UBE4AQ14139 1066 aa22.19■■□□□ 1.14
SREBF1-213ENST00000485080 TAF5LO75529 589 aa22.18■■□□□ 1.14
SREBF1-213ENST00000485080 TOMM70O94826 608 aa22.18■■□□□ 1.14
SREBF1-213ENST00000485080 KCNJ4P48050 445 aa22.18■■□□□ 1.14
SREBF1-213ENST00000485080 DOK7Q18PE1 504 aa22.18■■□□□ 1.14
SREBF1-213ENST00000485080 LRRC24Q50LG9 513 aa22.18■■□□□ 1.14
SREBF1-213ENST00000485080 VGLL2Q8N8G2 317 aa22.18■■□□□ 1.14
SREBF1-213ENST00000485080 HELBQ8NG08 1087 aaPredicted RBP22.18■■□□□ 1.14
SREBF1-213ENST00000485080 KLHDC4Q8TBB5 520 aa22.18■■□□□ 1.14
SREBF1-213ENST00000485080 COA1Q9GZY4 146 aa22.18■■□□□ 1.14
SREBF1-213ENST00000485080 ZNF609O15014 1411 aa22.17■■□□□ 1.14
SREBF1-213ENST00000485080 PLIN1O60240 522 aa22.17■■□□□ 1.14
SREBF1-213ENST00000485080 MVPQ14764 893 aaKnown RBP22.17■■□□□ 1.14
SREBF1-213ENST00000485080 TXNRD3Q86VQ6 643 aa22.17■■□□□ 1.14
SREBF1-213ENST00000485080 SRGAP3O43295 1099 aa22.16■■□□□ 1.14
SREBF1-213ENST00000485080 RAD17O75943 681 aa22.16■■□□□ 1.14
SREBF1-213ENST00000485080 PDE8BO95263 885 aa22.16■■□□□ 1.14
SREBF1-213ENST00000485080 SCNN1DP51172 638 aa22.16■■□□□ 1.14
SREBF1-213ENST00000485080 ATG9AQ7Z3C6 839 aa22.16■■□□□ 1.14
SREBF1-213ENST00000485080 RBM46Q8TBY0 533 aaKnown RBP22.16■■□□□ 1.14
SREBF1-213ENST00000485080 DDX19BQ9UMR2 479 aa22.16■■□□□ 1.14
SREBF1-213ENST00000485080 GJA3Q9Y6H8 435 aa22.16■■□□□ 1.14
SREBF1-213ENST00000485080 SCN9AQ15858 1988 aa22.16■■□□□ 1.14
SREBF1-213ENST00000485080 G3V3G9 751 aa22.15■■□□□ 1.14
SREBF1-213ENST00000485080 VIL1P09327 827 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms