RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 TM4SF4P48230 202 aa20.37■□□□□ 0.85
HDLBP-238ENST00000479894 NLRP10Q86W26 655 aa20.37■□□□□ 0.85
HDLBP-238ENST00000479894 NECTIN2Q92692 538 aa20.37■□□□□ 0.85
HDLBP-238ENST00000479894 EYA3Q99504 573 aa20.37■□□□□ 0.85
HDLBP-238ENST00000479894 CFHR5Q9BXR6 569 aa20.37■□□□□ 0.85
HDLBP-238ENST00000479894 NSFL1CQ9UNZ2 370 aaKnown RBP20.37■□□□□ 0.85
HDLBP-238ENST00000479894 PITPNM2Q9BZ72 1349 aa20.36■□□□□ 0.85
HDLBP-238ENST00000479894 PDIA6Q15084 440 aa20.35■□□□□ 0.85
HDLBP-238ENST00000479894 C6orf229H3BNL8 230 aa20.34■□□□□ 0.85
HDLBP-238ENST00000479894 RIMBP2O15034 1052 aa20.34■□□□□ 0.85
HDLBP-238ENST00000479894 ZNF280AP59817 542 aaPredicted RBP20.34■□□□□ 0.85
HDLBP-238ENST00000479894 ANGEL2Q5VTE6 544 aaKnown RBP20.34■□□□□ 0.85
HDLBP-238ENST00000479894 INTS3Q68E01 1043 aaKnown RBP20.34■□□□□ 0.85
HDLBP-238ENST00000479894 KCNQ5Q9NR82 932 aa20.34■□□□□ 0.85
HDLBP-238ENST00000479894 POLLQ9UGP5 575 aa20.34■□□□□ 0.85
HDLBP-238ENST00000479894 TRMT112Q9UI30 125 aaKnown RBP20.34■□□□□ 0.85
HDLBP-238ENST00000479894 ASTN2O75129 1339 aaPredicted RBP20.33■□□□□ 0.85
HDLBP-238ENST00000479894 FKTNO75072 461 aa20.33■□□□□ 0.85
HDLBP-238ENST00000479894 NEFMP07197 916 aa20.33■□□□□ 0.85
HDLBP-238ENST00000479894 THUMPD2Q9BTF0 503 aaKnown RBP20.33■□□□□ 0.85
HDLBP-238ENST00000479894 FXR1P51114 621 aaKnown RBP eCLIP20.32■□□□□ 0.846e-7■□□□□ 11.2
HDLBP-238ENST00000479894 TCIRG1Q13488 830 aa20.32■□□□□ 0.84
HDLBP-238ENST00000479894 SCARF1Q14162 830 aa20.32■□□□□ 0.84
HDLBP-238ENST00000479894 AGBL3Q8NEM8 1001 aa20.32■□□□□ 0.84
HDLBP-238ENST00000479894 SREBF2Q12772 1141 aa20.31■□□□□ 0.84
HDLBP-238ENST00000479894 SF3B3Q15393 1217 aaKnown RBP20.31■□□□□ 0.84
HDLBP-238ENST00000479894 DOK7Q18PE1 504 aa20.31■□□□□ 0.84
HDLBP-238ENST00000479894 HTTP42858 3142 aa20.31■□□□□ 0.84
HDLBP-238ENST00000479894 GPSM2P81274 684 aa20.3■□□□□ 0.84
HDLBP-238ENST00000479894 TBC1D16Q8TBP0 767 aa20.3■□□□□ 0.84
HDLBP-238ENST00000479894 CELF1Q92879 486 aaKnown RBP20.3■□□□□ 0.84
HDLBP-238ENST00000479894 ZC3H12CQ9C0D7 883 aaKnown RBP20.3■□□□□ 0.84
HDLBP-238ENST00000479894 LAMB1P07942 1786 aa20.29■□□□□ 0.84
HDLBP-238ENST00000479894 RSBN1LQ6PCB5 846 aaPredicted RBP20.28■□□□□ 0.84
HDLBP-238ENST00000479894 COPS6Q7L5N1 327 aa20.28■□□□□ 0.84
HDLBP-238ENST00000479894 PODXL2Q9NZ53 605 aa20.28■□□□□ 0.84
HDLBP-238ENST00000479894 CENPFP49454 3210 aa20.27■□□□□ 0.84
HDLBP-238ENST00000479894 UBE2Q2LH0YL09 131 aa20.27■□□□□ 0.84
HDLBP-238ENST00000479894 ALDH1A1P00352 501 aa20.27■□□□□ 0.84
HDLBP-238ENST00000479894 EIF2S2P20042 333 aaKnown RBP20.27■□□□□ 0.84
HDLBP-238ENST00000479894 PROSER3Q2NL68 480 aa20.27■□□□□ 0.84
HDLBP-238ENST00000479894 MOB2Q70IA6 237 aa20.27■□□□□ 0.84
HDLBP-238ENST00000479894 MYOZ2Q9NPC6 264 aa20.27■□□□□ 0.84
HDLBP-238ENST00000479894 COL4A1P02462 1669 aa20.26■□□□□ 0.83
HDLBP-238ENST00000479894 G3V3G9 751 aa20.26■□□□□ 0.83
HDLBP-238ENST00000479894 DCAF8Q5TAQ9 597 aa20.26■□□□□ 0.83
HDLBP-238ENST00000479894 PNNQ9H307 717 aaKnown RBP20.26■□□□□ 0.83
HDLBP-238ENST00000479894 POTEFA5A3E0 1075 aa20.25■□□□□ 0.83
HDLBP-238ENST00000479894 ANXA1P04083 346 aa20.25■□□□□ 0.83
HDLBP-238ENST00000479894 USP17L8P0C7I0 530 aa20.25■□□□□ 0.83
HDLBP-238ENST00000479894 NFE2L2Q16236 605 aa20.25■□□□□ 0.83
HDLBP-238ENST00000479894 XAGE3Q8WTP9 111 aa20.25■□□□□ 0.83
HDLBP-238ENST00000479894 GMLQ99445 158 aa20.25■□□□□ 0.83
HDLBP-238ENST00000479894 CEP290O15078 2479 aa20.25■□□□□ 0.83
HDLBP-238ENST00000479894 NF2P35240 595 aa20.24■□□□□ 0.83
HDLBP-238ENST00000479894 RPS8P62241 208 aaKnown RBP20.24■□□□□ 0.83
HDLBP-238ENST00000479894 AIMP1Q12904 312 aaKnown RBP20.24■□□□□ 0.83
HDLBP-238ENST00000479894 BABAM1Q9NWV8 329 aa20.24■□□□□ 0.83
HDLBP-238ENST00000479894 TSPYL4Q9UJ04 414 aa20.24■□□□□ 0.83
HDLBP-238ENST00000479894 TTLL12Q14166 644 aaPredicted RBP20.23■□□□□ 0.83
HDLBP-238ENST00000479894 PLEKHF1Q96S99 279 aa20.23■□□□□ 0.83
HDLBP-238ENST00000479894 R3HDMLQ9H3Y0 253 aa20.23■□□□□ 0.83
HDLBP-238ENST00000479894 TRIM17Q9Y577 477 aa20.23■□□□□ 0.83
HDLBP-238ENST00000479894 TRIOBPQ9H2D6 2365 aa20.22■□□□□ 0.83
HDLBP-238ENST00000479894 INHBEP58166 350 aa20.22■□□□□ 0.83
HDLBP-238ENST00000479894 OTOP1Q7RTM1 612 aa20.22■□□□□ 0.83
HDLBP-238ENST00000479894 BRCA2P51587 3418 aa20.22■□□□□ 0.83
HDLBP-238ENST00000479894 CCER2I3L3R5 266 aa20.21■□□□□ 0.83
HDLBP-238ENST00000479894 UFL1O94874 794 aa20.21■□□□□ 0.83
HDLBP-238ENST00000479894 WDR43Q15061 677 aaKnown RBP eCLIP20.21■□□□□ 0.83
HDLBP-238ENST00000479894 FAM89AQ96GI7 184 aa20.21■□□□□ 0.83
HDLBP-238ENST00000479894 ISCA1Q9BUE6 129 aa20.21■□□□□ 0.83
HDLBP-238ENST00000479894 GGA1Q9UJY5 639 aa20.21■□□□□ 0.83
HDLBP-238ENST00000479894 ZNF646O15015 1829 aaPredicted RBP20.2■□□□□ 0.82
HDLBP-238ENST00000479894 ARMC9Q7Z3E5 817 aa20.2■□□□□ 0.82
HDLBP-238ENST00000479894 PODNQ7Z5L7 613 aa20.2■□□□□ 0.82
HDLBP-238ENST00000479894 ARMC5Q96C12 935 aa20.2■□□□□ 0.82
HDLBP-238ENST00000479894 USP17L3A6NCW0 530 aa20.19■□□□□ 0.82
HDLBP-238ENST00000479894 USP17L4A6NCW7 530 aa20.19■□□□□ 0.82
HDLBP-238ENST00000479894 MKRN3Q13064 507 aaKnown RBP20.19■□□□□ 0.82
HDLBP-238ENST00000479894 PRAMEF18Q5VWM3 479 aa20.19■□□□□ 0.82
HDLBP-238ENST00000479894 SPRYD7Q5W111 196 aa20.19■□□□□ 0.82
HDLBP-238ENST00000479894 USP17L1Q7RTZ2 530 aa20.19■□□□□ 0.82
HDLBP-238ENST00000479894 PLBD2Q8NHP8 589 aa20.19■□□□□ 0.82
HDLBP-238ENST00000479894 MRS2Q9HD23 443 aa20.19■□□□□ 0.82
HDLBP-238ENST00000479894 ANKIB1Q9P2G1 1089 aa20.19■□□□□ 0.82
HDLBP-238ENST00000479894 MANSC4A6NHS7 340 aaPredicted RBP20.18■□□□□ 0.82
HDLBP-238ENST00000479894 MMP14P50281 582 aa20.18■□□□□ 0.82
HDLBP-238ENST00000479894 PTPN12Q05209 780 aaKnown RBP20.18■□□□□ 0.82
HDLBP-238ENST00000479894 ERO1AQ96HE7 468 aa20.18■□□□□ 0.82
HDLBP-238ENST00000479894 NBPF9Q3BBW0 867 aa20.17■□□□□ 0.82
HDLBP-238ENST00000479894 LDLRAD1Q5T700 205 aa20.17■□□□□ 0.82
HDLBP-238ENST00000479894 SCAF8Q9UPN6 1271 aaKnown RBP20.17■□□□□ 0.82
HDLBP-238ENST00000479894 COLQQ9Y215 455 aaPredicted RBP20.17■□□□□ 0.82
HDLBP-238ENST00000479894 PTPN22Q9Y2R2 807 aa20.17■□□□□ 0.82
HDLBP-238ENST00000479894 WNT10BO00744 389 aa20.16■□□□□ 0.82
HDLBP-238ENST00000479894 IRS4O14654 1257 aaPredicted RBP20.16■□□□□ 0.82
HDLBP-238ENST00000479894 HSP90B1P14625 803 aaKnown RBP20.16■□□□□ 0.82
HDLBP-238ENST00000479894 TRIM28Q13263 835 aaKnown RBP20.16■□□□□ 0.82
HDLBP-238ENST00000479894 IFNL1Q8IU54 200 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms