RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 COL13A1Q5TAT6 717 aaPredicted RBP7.64□□□□□ -1.19
CMSS1-204ENST00000479555 TXNDC11Q6PKC3 985 aa7.64□□□□□ -1.19
CMSS1-204ENST00000479555 STK32AQ8WU08 396 aa7.64□□□□□ -1.19
CMSS1-204ENST00000479555 F8W735 103 aaPredicted RBP7.63□□□□□ -1.19
CMSS1-204ENST00000479555 GHRHP01286 108 aa7.63□□□□□ -1.19
CMSS1-204ENST00000479555 CDC25BP30305 580 aa7.63□□□□□ -1.19
CMSS1-204ENST00000479555 ATP11AP98196 1134 aa7.63□□□□□ -1.19
CMSS1-204ENST00000479555 OCLNQ16625 522 aa7.63□□□□□ -1.19
CMSS1-204ENST00000479555 ADAMTSL4Q6UY14 1074 aa7.63□□□□□ -1.19
CMSS1-204ENST00000479555 C11orf16Q9NQ32 467 aa7.63□□□□□ -1.19
CMSS1-204ENST00000479555 ARID4AP29374 1257 aaPredicted RBP7.62□□□□□ -1.19
CMSS1-204ENST00000479555 SSTR4P31391 388 aa7.62□□□□□ -1.19
CMSS1-204ENST00000479555 NAA30Q147X3 362 aaPredicted RBP7.62□□□□□ -1.19
CMSS1-204ENST00000479555 DZIP1LQ8IYY4 767 aaKnown RBP7.62□□□□□ -1.19
CMSS1-204ENST00000479555 RNF112Q9ULX5 631 aa7.62□□□□□ -1.19
CMSS1-204ENST00000479555 TNFRSF10BO14763 440 aa7.61□□□□□ -1.19
CMSS1-204ENST00000479555 WISP1O95388 367 aa7.61□□□□□ -1.19
CMSS1-204ENST00000479555 FSTP19883 344 aa7.61□□□□□ -1.19
CMSS1-204ENST00000479555 TMEM132AQ24JP5 1023 aa7.61□□□□□ -1.19
CMSS1-204ENST00000479555 GALNT11Q8NCW6 608 aa7.61□□□□□ -1.19
CMSS1-204ENST00000479555 LACRTQ9GZZ8 138 aa7.61□□□□□ -1.19
CMSS1-204ENST00000479555 GLB1P16278 677 aa7.6□□□□□ -1.19
CMSS1-204ENST00000479555 FAM69CQ0P6D2 419 aa7.6□□□□□ -1.19
CMSS1-204ENST00000479555 NLRP13Q86W25 1043 aa7.6□□□□□ -1.19
CMSS1-204ENST00000479555 MRPL18Q9H0U6 180 aaKnown RBP7.6□□□□□ -1.19
CMSS1-204ENST00000479555 KCNK4Q9NYG8 393 aa7.6□□□□□ -1.19
CMSS1-204ENST00000479555 UBAP1LF5GYI3 381 aa7.59□□□□□ -1.19
CMSS1-204ENST00000479555 LINC01387J3KSC0 135 aa7.59□□□□□ -1.19
CMSS1-204ENST00000479555 SOX18P35713 384 aa7.59□□□□□ -1.19
CMSS1-204ENST00000479555 C16orf46Q6P387 395 aa7.59□□□□□ -1.19
CMSS1-204ENST00000479555 CARD10Q9BWT7 1032 aa7.59□□□□□ -1.19
CMSS1-204ENST00000479555 ACIN1Q9UKV3 1341 aaKnown RBP7.58□□□□□ -1.2
CMSS1-204ENST00000479555 ZBTB39O15060 712 aa7.58□□□□□ -1.2
CMSS1-204ENST00000479555 CYP2E1P05181 493 aaPredicted RBP7.58□□□□□ -1.2
CMSS1-204ENST00000479555 HOXD8P13378 290 aaPredicted RBP7.58□□□□□ -1.2
CMSS1-204ENST00000479555 UBL7Q96S82 380 aaPredicted RBP7.58□□□□□ -1.2
CMSS1-204ENST00000479555 RBSNQ9H1K0 784 aa7.58□□□□□ -1.2
CMSS1-204ENST00000479555 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.58□□□□□ -1.2
CMSS1-204ENST00000479555 PCMTD2Q9NV79 361 aa7.58□□□□□ -1.2
CMSS1-204ENST00000479555 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.57□□□□□ -1.2
CMSS1-204ENST00000479555 BRD2P25440 801 aaKnown RBP7.57□□□□□ -1.2
CMSS1-204ENST00000479555 CEP135Q66GS9 1140 aa7.57□□□□□ -1.2
CMSS1-204ENST00000479555 Q6ZS46 218 aa7.57□□□□□ -1.2
CMSS1-204ENST00000479555 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.57□□□□□ -1.2
CMSS1-204ENST00000479555 TMEM130Q8N3G9 435 aa7.57□□□□□ -1.2
CMSS1-204ENST00000479555 OR13H1Q8NG92 308 aa7.57□□□□□ -1.2
CMSS1-204ENST00000479555 GPR152Q8TDT2 470 aa7.57□□□□□ -1.2
CMSS1-204ENST00000479555 RASSF4Q9H2L5 321 aa7.57□□□□□ -1.2
CMSS1-204ENST00000479555 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.57□□□□□ -1.2
CMSS1-204ENST00000479555 MED26O95402 600 aa7.56□□□□□ -1.2
CMSS1-204ENST00000479555 ZAP70P43403 619 aa7.56□□□□□ -1.2
CMSS1-204ENST00000479555 SWI5Q1ZZU3 235 aa7.56□□□□□ -1.2
CMSS1-204ENST00000479555 PPME1Q9Y570 386 aa7.56□□□□□ -1.2
CMSS1-204ENST00000479555 DDX3YO15523 660 aaKnown RBP7.55□□□□□ -1.2
CMSS1-204ENST00000479555 TGFB1P01137 390 aa7.55□□□□□ -1.2
CMSS1-204ENST00000479555 ACAD11Q709F0 780 aa7.55□□□□□ -1.2
CMSS1-204ENST00000479555 SH2B1Q9NRF2 756 aaPredicted RBP7.55□□□□□ -1.2
CMSS1-204ENST00000479555 CXXC1Q9P0U4 656 aaPredicted RBP7.55□□□□□ -1.2
CMSS1-204ENST00000479555 TM4SF5O14894 197 aa7.54□□□□□ -1.2
CMSS1-204ENST00000479555 ACPPP15309 386 aa7.54□□□□□ -1.2
CMSS1-204ENST00000479555 SCNN1AP37088 669 aa7.54□□□□□ -1.2
CMSS1-204ENST00000479555 TMEM164Q5U3C3 297 aa7.54□□□□□ -1.2
CMSS1-204ENST00000479555 ARMC10Q8N2F6 343 aa7.54□□□□□ -1.2
CMSS1-204ENST00000479555 PIK3R5Q8WYR1 880 aa7.54□□□□□ -1.2
CMSS1-204ENST00000479555 SLAIN2Q9P270 581 aa7.54□□□□□ -1.2
CMSS1-204ENST00000479555 RAXQ9Y2V3 346 aa7.54□□□□□ -1.2
CMSS1-204ENST00000479555 EPHA1P21709 976 aa7.53□□□□□ -1.2
CMSS1-204ENST00000479555 HYAL2Q12891 473 aa7.53□□□□□ -1.2
CMSS1-204ENST00000479555 UBASH3BQ8TF42 649 aa7.53□□□□□ -1.2
CMSS1-204ENST00000479555 KANSL3Q9P2N6 904 aa7.53□□□□□ -1.2
CMSS1-204ENST00000479555 ADAM11O75078 769 aa7.52□□□□□ -1.21
CMSS1-204ENST00000479555 CDC27P30260 824 aa7.52□□□□□ -1.21
CMSS1-204ENST00000479555 CD68P34810 354 aaPredicted RBP7.52□□□□□ -1.21
CMSS1-204ENST00000479555 CD97P48960 835 aa7.52□□□□□ -1.21
CMSS1-204ENST00000479555 ATCAYQ86WG3 371 aa7.52□□□□□ -1.21
CMSS1-204ENST00000479555 KRTAP19-1Q8IUB9 90 aa7.52□□□□□ -1.21
CMSS1-204ENST00000479555 MAP4K3Q8IVH8 894 aa7.52□□□□□ -1.21
CMSS1-204ENST00000479555 FOXD4L4Q8WXT5 416 aaPredicted RBP7.52□□□□□ -1.21
CMSS1-204ENST00000479555 SRA1Q9HD15 236 aaKnown RBP7.52□□□□□ -1.21
CMSS1-204ENST00000479555 SRPK2P78362 688 aaKnown RBP7.51□□□□□ -1.21
CMSS1-204ENST00000479555 ELOAQ14241 798 aaKnown RBP7.51□□□□□ -1.21
CMSS1-204ENST00000479555 TTC39BQ5VTQ0 682 aaPredicted RBP7.51□□□□□ -1.21
CMSS1-204ENST00000479555 MCTP1Q6DN14 999 aa7.51□□□□□ -1.21
CMSS1-204ENST00000479555 KIAA1211Q6ZU35 1233 aa7.51□□□□□ -1.21
CMSS1-204ENST00000479555 TMEM63CQ9P1W3 806 aa7.51□□□□□ -1.21
CMSS1-204ENST00000479555 STOML1Q9UBI4 398 aa7.51□□□□□ -1.21
CMSS1-204ENST00000479555 SEPT3Q9UH03 358 aa7.51□□□□□ -1.21
CMSS1-204ENST00000479555 FSCN2O14926 492 aa7.5□□□□□ -1.21
CMSS1-204ENST00000479555 ADAMTS4O75173 837 aa7.5□□□□□ -1.21
CMSS1-204ENST00000479555 TRPA1O75762 1119 aa7.5□□□□□ -1.21
CMSS1-204ENST00000479555 SMNDC1O75940 238 aaKnown RBP eCLIP7.5□□□□□ -1.21
CMSS1-204ENST00000479555 IGLV1-40P01703 118 aa7.5□□□□□ -1.21
CMSS1-204ENST00000479555 KLHDC7BQ96G42 594 aa7.5□□□□□ -1.21
CMSS1-204ENST00000479555 SPACA7Q96KW9 195 aa7.5□□□□□ -1.21
CMSS1-204ENST00000479555 MUC3BQ9H195 1237 aa7.5□□□□□ -1.21
CMSS1-204ENST00000479555 ABI2Q9NYB9 513 aaPredicted RBP7.5□□□□□ -1.21
CMSS1-204ENST00000479555 CNTN3Q9P232 1028 aa7.5□□□□□ -1.21
CMSS1-204ENST00000479555 STIM2Q9P246 746 aa7.5□□□□□ -1.21
CMSS1-204ENST00000479555 HMX2A2RU54 273 aa7.49□□□□□ -1.21
CMSS1-204ENST00000479555 A6NHS1 94 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms