RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 PAPPA2Q9BXP8 1791 aa21.02■□□□□ 0.96
DDX56-210ENST00000479440 G3V3G9 751 aa21.02■□□□□ 0.96
DDX56-210ENST00000479440 DCAF8Q5TAQ9 597 aa21.02■□□□□ 0.96
DDX56-210ENST00000479440 RASAL3Q86YV0 1011 aa21.02■□□□□ 0.96
DDX56-210ENST00000479440 TBC1D16Q8TBP0 767 aa21.02■□□□□ 0.96
DDX56-210ENST00000479440 FAM89AQ96GI7 184 aa21.02■□□□□ 0.96
DDX56-210ENST00000479440 CSRNP1Q96S65 589 aa21.02■□□□□ 0.96
DDX56-210ENST00000479440 ZC3H12CQ9C0D7 883 aaKnown RBP21.02■□□□□ 0.96
DDX56-210ENST00000479440 CHPF2Q9P2E5 772 aa21.02■□□□□ 0.96
DDX56-210ENST00000479440 VIL1P09327 827 aaKnown RBP21.01■□□□□ 0.95
DDX56-210ENST00000479440 FKBP1BP68106 108 aa21.01■□□□□ 0.95
DDX56-210ENST00000479440 ISCA1Q9BUE6 129 aa21.01■□□□□ 0.95
DDX56-210ENST00000479440 HDGFL1Q5TGJ6 251 aa21■□□□□ 0.95
DDX56-210ENST00000479440 TNRC18O15417 2968 aaPredicted RBP21■□□□□ 0.95
DDX56-210ENST00000479440 COL4A1P02462 1669 aa20.99■□□□□ 0.95
DDX56-210ENST00000479440 TMPOP42166 694 aaKnown RBP20.99■□□□□ 0.95
DDX56-210ENST00000479440 PKN2Q16513 984 aaKnown RBP20.99■□□□□ 0.95
DDX56-210ENST00000479440 ANKRD13DQ6ZTN6 518 aa20.99■□□□□ 0.95
DDX56-210ENST00000479440 ZNF428Q96B54 188 aa20.99■□□□□ 0.95
DDX56-210ENST00000479440 KCNQ5Q9NR82 932 aa20.99■□□□□ 0.95
DDX56-210ENST00000479440 PODXL2Q9NZ53 605 aa20.99■□□□□ 0.95
DDX56-210ENST00000479440 UFL1O94874 794 aa20.98■□□□□ 0.95
DDX56-210ENST00000479440 HOXB7P09629 217 aa20.98■□□□□ 0.95
DDX56-210ENST00000479440 HSP90B1P14625 803 aaKnown RBP20.98■□□□□ 0.95
DDX56-210ENST00000479440 RPS8P62241 208 aaKnown RBP20.98■□□□□ 0.95
DDX56-210ENST00000479440 ANGEL2Q5VTE6 544 aaKnown RBP20.98■□□□□ 0.95
DDX56-210ENST00000479440 AGBL3Q8NEM8 1001 aa20.98■□□□□ 0.95
DDX56-210ENST00000479440 HPS5Q9UPZ3 1129 aa20.98■□□□□ 0.95
DDX56-210ENST00000479440 PITPNM2Q9BZ72 1349 aa20.98■□□□□ 0.95
DDX56-210ENST00000479440 ATP5J2-PTCD1G3V325 749 aa20.97■□□□□ 0.95
DDX56-210ENST00000479440 IRS4O14654 1257 aaPredicted RBP20.97■□□□□ 0.95
DDX56-210ENST00000479440 ZNF280AP59817 542 aaPredicted RBP20.97■□□□□ 0.95
DDX56-210ENST00000479440 DBF4Q9UBU7 674 aaPredicted RBP20.97■□□□□ 0.95
DDX56-210ENST00000479440 GGA1Q9UJY5 639 aa20.97■□□□□ 0.95
DDX56-210ENST00000479440 HDAC9Q9UKV0 1011 aa20.97■□□□□ 0.95
DDX56-210ENST00000479440 ASTN2O75129 1339 aaPredicted RBP20.97■□□□□ 0.95
DDX56-210ENST00000479440 KRT24Q2M2I5 525 aa20.96■□□□□ 0.95
DDX56-210ENST00000479440 RTL5Q5HYW3 569 aaPredicted RBP20.96■□□□□ 0.95
DDX56-210ENST00000479440 RSBN1LQ6PCB5 846 aaPredicted RBP20.96■□□□□ 0.95
DDX56-210ENST00000479440 ANKIB1Q9P2G1 1089 aa20.96■□□□□ 0.95
DDX56-210ENST00000479440 SCN9AQ15858 1988 aa20.96■□□□□ 0.95
DDX56-210ENST00000479440 SCARF1Q14162 830 aa20.95■□□□□ 0.94
DDX56-210ENST00000479440 POLR2AP24928 1970 aaKnown RBP20.95■□□□□ 0.94
DDX56-210ENST00000479440 CHL1O00533 1208 aa20.94■□□□□ 0.94
DDX56-210ENST00000479440 MYOZ2Q9NPC6 264 aa20.94■□□□□ 0.94
DDX56-210ENST00000479440 HYPKQ9NX55 129 aa20.94■□□□□ 0.94
DDX56-210ENST00000479440 LAS1LQ9Y4W2 734 aaKnown RBP20.94■□□□□ 0.94
DDX56-210ENST00000479440 PSME4Q14997 1843 aa20.94■□□□□ 0.94
DDX56-210ENST00000479440 PDE4DIPQ5VU43 2346 aa20.94■□□□□ 0.94
DDX56-210ENST00000479440 TRIM28Q13263 835 aaKnown RBP20.93■□□□□ 0.94
DDX56-210ENST00000479440 ZBTB38Q8NAP3 1195 aaPredicted RBP20.93■□□□□ 0.94
DDX56-210ENST00000479440 USP17L8P0C7I0 530 aa20.92■□□□□ 0.94
DDX56-210ENST00000479440 CCDC152Q4G0S7 254 aa20.92■□□□□ 0.94
DDX56-210ENST00000479440 ZNF296Q8WUU4 475 aaPredicted RBP20.92■□□□□ 0.94
DDX56-210ENST00000479440 XDHP47989 1333 aa20.91■□□□□ 0.94
DDX56-210ENST00000479440 GOLGA2Q08379 1002 aa20.91■□□□□ 0.94
DDX56-210ENST00000479440 NF2P35240 595 aa20.9■□□□□ 0.94
DDX56-210ENST00000479440 NEUROD2Q15784 382 aa20.9■□□□□ 0.94
DDX56-210ENST00000479440 NOM1Q5C9Z4 860 aaKnown RBP20.9■□□□□ 0.94
DDX56-210ENST00000479440 SEC31BQ9NQW1 1179 aa20.9■□□□□ 0.94
DDX56-210ENST00000479440 USP17L3A6NCW0 530 aa20.89■□□□□ 0.93
DDX56-210ENST00000479440 USP17L4A6NCW7 530 aa20.89■□□□□ 0.93
DDX56-210ENST00000479440 TBC1D8O95759 1140 aa20.89■□□□□ 0.93
DDX56-210ENST00000479440 USP17L1Q7RTZ2 530 aa20.89■□□□□ 0.93
DDX56-210ENST00000479440 RIC3Q7Z5B4 369 aa20.89■□□□□ 0.93
DDX56-210ENST00000479440 GMLQ99445 158 aa20.89■□□□□ 0.93
DDX56-210ENST00000479440 ATP2B4P23634 1241 aa20.88■□□□□ 0.93
DDX56-210ENST00000479440 SREBF2Q12772 1141 aa20.88■□□□□ 0.93
DDX56-210ENST00000479440 TTLL12Q14166 644 aaPredicted RBP20.88■□□□□ 0.93
DDX56-210ENST00000479440 FBXO46Q6PJ61 603 aaPredicted RBP20.88■□□□□ 0.93
DDX56-210ENST00000479440 PODNQ7Z5L7 613 aa20.88■□□□□ 0.93
DDX56-210ENST00000479440 PDE8AO60658 829 aa20.87■□□□□ 0.93
DDX56-210ENST00000479440 MOB2Q70IA6 237 aa20.87■□□□□ 0.93
DDX56-210ENST00000479440 ANKRD18AQ8IVF6 992 aa20.87■□□□□ 0.93
DDX56-210ENST00000479440 GCC1Q96CN9 775 aa20.87■□□□□ 0.93
DDX56-210ENST00000479440 UBE2Q2LH0YL09 131 aa20.86■□□□□ 0.93
DDX56-210ENST00000479440 GPR25O00155 361 aa20.86■□□□□ 0.93
DDX56-210ENST00000479440 PCCAP05165 728 aaPredicted RBP20.86■□□□□ 0.93
DDX56-210ENST00000479440 RALBP1Q15311 655 aa20.86■□□□□ 0.93
DDX56-210ENST00000479440 CCDC146Q8IYE0 955 aa20.86■□□□□ 0.93
DDX56-210ENST00000479440 MED23Q9ULK4 1368 aa20.85■□□□□ 0.93
DDX56-210ENST00000479440 MYO3BQ8WXR4 1341 aa20.85■□□□□ 0.93
DDX56-210ENST00000479440 TM4SF4P48230 202 aa20.85■□□□□ 0.93
DDX56-210ENST00000479440 DUSP27Q5VZP5 1158 aa20.85■□□□□ 0.93
DDX56-210ENST00000479440 OGFOD1Q8N543 542 aa20.85■□□□□ 0.93
DDX56-210ENST00000479440 CCDC191Q8NCU4 936 aa20.85■□□□□ 0.93
DDX56-210ENST00000479440 TRIM35Q9UPQ4 493 aa20.85■□□□□ 0.93
DDX56-210ENST00000479440 RUNDC1Q96C34 613 aa20.84■□□□□ 0.93
DDX56-210ENST00000479440 CDC5LQ99459 802 aaKnown RBP20.84■□□□□ 0.93
DDX56-210ENST00000479440 MYD88Q99836 296 aa20.84■□□□□ 0.93
DDX56-210ENST00000479440 CFHR5Q9BXR6 569 aa20.84■□□□□ 0.93
DDX56-210ENST00000479440 FKTNO75072 461 aa20.83■□□□□ 0.93
DDX56-210ENST00000479440 CCDC85AQ96PX6 553 aaPredicted RBP20.83■□□□□ 0.93
DDX56-210ENST00000479440 CWC25Q9NXE8 425 aaPredicted RBP20.83■□□□□ 0.93
DDX56-210ENST00000479440 SCAF8Q9UPN6 1271 aaKnown RBP20.83■□□□□ 0.93
DDX56-210ENST00000479440 MKRN3Q13064 507 aaKnown RBP20.82■□□□□ 0.92
DDX56-210ENST00000479440 NBPF9Q3BBW0 867 aa20.82■□□□□ 0.92
DDX56-210ENST00000479440 PRAMEF18Q5VWM3 479 aa20.82■□□□□ 0.92
DDX56-210ENST00000479440 ARMC9Q7Z3E5 817 aa20.82■□□□□ 0.92
DDX56-210ENST00000479440 WNT10BO00744 389 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms