RNA–Protein interactions for RNA: ENST00000477984.1

LINC00336-201, long intergenic non-protein coding RNA 336, humanhuman

TSL 2 BASIC

Gene LINC00336, Length 2,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336-201ENST00000477984 FOXD4L4Q8WXT5 416 aaPredicted RBP20.51■□□□□ 0.87
LINC00336-201ENST00000477984 DNAJC2Q99543 621 aaKnown RBP20.51■□□□□ 0.87
LINC00336-201ENST00000477984 DOT1LQ8TEK3 1739 aa20.51■□□□□ 0.87
LINC00336-201ENST00000477984 TAF5LO75529 589 aa20.5■□□□□ 0.87
LINC00336-201ENST00000477984 ADAMTS2O95450 1211 aa20.5■□□□□ 0.87
LINC00336-201ENST00000477984 HLFQ16534 295 aa20.5■□□□□ 0.87
LINC00336-201ENST00000477984 SASS6Q6UVJ0 657 aa20.5■□□□□ 0.87
LINC00336-201ENST00000477984 ZNF589Q86UQ0 364 aaPredicted RBP20.5■□□□□ 0.87
LINC00336-201ENST00000477984 NLRP10Q86W26 655 aa20.5■□□□□ 0.87
LINC00336-201ENST00000477984 KBTBD3Q8NAB2 608 aa20.5■□□□□ 0.87
LINC00336-201ENST00000477984 PALLDQ8WX93 1383 aa20.5■□□□□ 0.87
LINC00336-201ENST00000477984 SYTL4Q96C24 671 aaPredicted RBP20.5■□□□□ 0.87
LINC00336-201ENST00000477984 FAM89AQ96GI7 184 aa20.5■□□□□ 0.87
LINC00336-201ENST00000477984 NEUROD6Q96NK8 337 aa20.5■□□□□ 0.87
LINC00336-201ENST00000477984 HMG20BQ9P0W2 317 aa20.5■□□□□ 0.87
LINC00336-201ENST00000477984 ZBTB1Q9Y2K1 713 aa20.5■□□□□ 0.87
LINC00336-201ENST00000477984 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.5■□□□□ 0.87
LINC00336-201ENST00000477984 ZSCAN22P10073 491 aaPredicted RBP20.5■□□□□ 0.87
LINC00336-201ENST00000477984 PSMA5P28066 241 aa20.5■□□□□ 0.87
LINC00336-201ENST00000477984 USPL1Q5W0Q7 1092 aa20.5■□□□□ 0.87
LINC00336-201ENST00000477984 ATP6V1DQ9Y5K8 247 aa20.5■□□□□ 0.87
LINC00336-201ENST00000477984 ERVV-1B6SEH8 477 aa20.49■□□□□ 0.87
LINC00336-201ENST00000477984 IL6STP40189 918 aaPredicted RBP20.49■□□□□ 0.87
LINC00336-201ENST00000477984 TIMM10P62072 90 aa20.49■□□□□ 0.87
LINC00336-201ENST00000477984 DDB1Q16531 1140 aa20.49■□□□□ 0.87
LINC00336-201ENST00000477984 TSGA10IPQ3SY00 556 aa20.49■□□□□ 0.87
LINC00336-201ENST00000477984 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.49■□□□□ 0.87
LINC00336-201ENST00000477984 ZSCAN31Q96LW9 406 aaPredicted RBP20.49■□□□□ 0.87
LINC00336-201ENST00000477984 PUS3Q9BZE2 481 aaKnown RBP20.49■□□□□ 0.87
LINC00336-201ENST00000477984 CEP126Q9P2H0 1117 aa20.49■□□□□ 0.87
LINC00336-201ENST00000477984 GADD45BO75293 160 aaPredicted RBP20.48■□□□□ 0.87
LINC00336-201ENST00000477984 CPA1P15085 419 aa20.48■□□□□ 0.87
LINC00336-201ENST00000477984 UBE2HP62256 183 aa20.48■□□□□ 0.87
LINC00336-201ENST00000477984 A0A1B0GUL7 405 aa20.48■□□□□ 0.87
LINC00336-201ENST00000477984 PDIA4P13667 645 aaKnown RBP20.48■□□□□ 0.87
LINC00336-201ENST00000477984 KIAA2012Q0VF49 1180 aa20.48■□□□□ 0.87
LINC00336-201ENST00000477984 NDUFB9Q9Y6M9 179 aa20.48■□□□□ 0.87
LINC00336-201ENST00000477984 MCMDC2Q4G0Z9 681 aa20.47■□□□□ 0.87
LINC00336-201ENST00000477984 DDX46Q7L014 1031 aaKnown RBP20.47■□□□□ 0.87
LINC00336-201ENST00000477984 SH2B1Q9NRF2 756 aaPredicted RBP20.47■□□□□ 0.87
LINC00336-201ENST00000477984 AKAP2Q9Y2D5 859 aa20.47■□□□□ 0.87
LINC00336-201ENST00000477984 ANKRD36CQ5JPF3 1778 aa20.47■□□□□ 0.87
LINC00336-201ENST00000477984 SPATA31A5Q5VU36 1347 aa20.47■□□□□ 0.87
LINC00336-201ENST00000477984 SPATA31A7Q8IWB4 1347 aa20.47■□□□□ 0.87
LINC00336-201ENST00000477984 SH3TC1Q8TE82 1336 aa20.47■□□□□ 0.87
LINC00336-201ENST00000477984 IFIT5Q13325 482 aaKnown RBP20.47■□□□□ 0.87
LINC00336-201ENST00000477984 RNF214Q8ND24 703 aa20.47■□□□□ 0.87
LINC00336-201ENST00000477984 ALDH8A1Q9H2A2 487 aaPredicted RBP20.47■□□□□ 0.87
LINC00336-201ENST00000477984 PAG1Q9NWQ8 432 aa20.47■□□□□ 0.87
LINC00336-201ENST00000477984 UQCRHLA0A096LP55 91 aa20.46■□□□□ 0.87
LINC00336-201ENST00000477984 UQCRHP07919 91 aa20.46■□□□□ 0.87
LINC00336-201ENST00000477984 STX6O43752 255 aa20.45■□□□□ 0.86
LINC00336-201ENST00000477984 SPEF2Q9C093 1822 aa20.45■□□□□ 0.86
LINC00336-201ENST00000477984 NWD2Q9ULI1 1742 aa20.45■□□□□ 0.86
LINC00336-201ENST00000477984 GPTP24298 496 aa20.45■□□□□ 0.86
LINC00336-201ENST00000477984 BARGINQ6ZT62 677 aa20.45■□□□□ 0.86
LINC00336-201ENST00000477984 DZIP3Q86Y13 1208 aaKnown RBP20.45■□□□□ 0.86
LINC00336-201ENST00000477984 HELLSQ9NRZ9 838 aa20.45■□□□□ 0.86
LINC00336-201ENST00000477984 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.45■□□□□ 0.86
LINC00336-201ENST00000477984 U3KPZ7 1027 aaPredicted RBP20.45■□□□□ 0.86
LINC00336-201ENST00000477984 SLIT2O94813 1529 aa20.45■□□□□ 0.86
LINC00336-201ENST00000477984 GOLIM4O00461 696 aa20.44■□□□□ 0.86
LINC00336-201ENST00000477984 F13A1P00488 732 aa20.44■□□□□ 0.86
LINC00336-201ENST00000477984 IFIT1P09914 478 aaKnown RBP20.44■□□□□ 0.86
LINC00336-201ENST00000477984 KRT32Q14532 448 aa20.44■□□□□ 0.86
LINC00336-201ENST00000477984 TAF7LQ5H9L4 462 aa20.44■□□□□ 0.86
LINC00336-201ENST00000477984 CTSWP56202 376 aa20.44■□□□□ 0.86
LINC00336-201ENST00000477984 BLOC1S2Q6QNY1 142 aa20.44■□□□□ 0.86
LINC00336-201ENST00000477984 TTLL11Q8NHH1 800 aa20.44■□□□□ 0.86
LINC00336-201ENST00000477984 CCDC9Q9Y3X0 531 aaKnown RBP20.44■□□□□ 0.86
LINC00336-201ENST00000477984 LARGE1O95461 756 aa20.43■□□□□ 0.86
LINC00336-201ENST00000477984 PTMAP06454 111 aaKnown RBP20.43■□□□□ 0.86
LINC00336-201ENST00000477984 SYT1P21579 422 aa20.43■□□□□ 0.86
LINC00336-201ENST00000477984 RPS6KB1P23443 525 aa20.43■□□□□ 0.86
LINC00336-201ENST00000477984 ANKRD1Q15327 319 aa20.43■□□□□ 0.86
LINC00336-201ENST00000477984 MARCH10Q8NA82 808 aaPredicted RBP20.43■□□□□ 0.86
LINC00336-201ENST00000477984 PIBF1Q8WXW3 757 aa20.43■□□□□ 0.86
LINC00336-201ENST00000477984 EIF5P55010 431 aaKnown RBP20.42■□□□□ 0.86
LINC00336-201ENST00000477984 ZNF34Q8IZ26 560 aa20.42■□□□□ 0.86
LINC00336-201ENST00000477984 LARP6Q9BRS8 491 aaKnown RBP20.42■□□□□ 0.86
LINC00336-201ENST00000477984 SMC3Q9UQE7 1217 aa20.42■□□□□ 0.86
LINC00336-201ENST00000477984 CICQ96RK0 1608 aaPredicted RBP20.42■□□□□ 0.86
LINC00336-201ENST00000477984 IRS4O14654 1257 aaPredicted RBP20.42■□□□□ 0.86
LINC00336-201ENST00000477984 CCDC158Q5M9N0 1113 aa20.42■□□□□ 0.86
LINC00336-201ENST00000477984 ZMYM1Q5SVZ6 1142 aa20.42■□□□□ 0.86
LINC00336-201ENST00000477984 ILDR1Q86SU0 546 aaPredicted RBP20.42■□□□□ 0.86
LINC00336-201ENST00000477984 SYNE4Q8N205 404 aa20.42■□□□□ 0.86
LINC00336-201ENST00000477984 PRIMPOLQ96LW4 560 aa20.42■□□□□ 0.86
LINC00336-201ENST00000477984 SEC62Q99442 399 aaKnown RBP20.42■□□□□ 0.86
LINC00336-201ENST00000477984 FUCA2Q9BTY2 467 aa20.42■□□□□ 0.86
LINC00336-201ENST00000477984 RIC1Q4ADV7 1423 aa20.42■□□□□ 0.86
LINC00336-201ENST00000477984 CHGBP05060 677 aa20.41■□□□□ 0.86
LINC00336-201ENST00000477984 INTS5Q6P9B9 1019 aaKnown RBP20.41■□□□□ 0.86
LINC00336-201ENST00000477984 CCDC129Q6ZRS4 1044 aa20.41■□□□□ 0.86
LINC00336-201ENST00000477984 XAGE2Q96GT9 111 aa20.41■□□□□ 0.86
LINC00336-201ENST00000477984 CCDC85AQ96PX6 553 aaPredicted RBP20.41■□□□□ 0.86
LINC00336-201ENST00000477984 GDPD2Q9HCC8 539 aa20.41■□□□□ 0.86
LINC00336-201ENST00000477984 CCDC87Q9NVE4 849 aa20.41■□□□□ 0.86
LINC00336-201ENST00000477984 TRMT112Q9UI30 125 aaKnown RBP20.41■□□□□ 0.86
LINC00336-201ENST00000477984 CNPY2Q9Y2B0 182 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms