RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 SCN9AQ15858 1988 aa26.57■■□□□ 1.84
PDLIM1-202ENST00000477757 RASAL3Q86YV0 1011 aa26.56■■□□□ 1.84
PDLIM1-202ENST00000477757 NECTIN2Q92692 538 aa26.56■■□□□ 1.84
PDLIM1-202ENST00000477757 CDCA5Q96FF9 252 aa26.56■■□□□ 1.84
PDLIM1-202ENST00000477757 PAPPA2Q9BXP8 1791 aa26.56■■□□□ 1.84
PDLIM1-202ENST00000477757 DOK7Q18PE1 504 aa26.55■■□□□ 1.84
PDLIM1-202ENST00000477757 ASTN2O75129 1339 aaPredicted RBP26.55■■□□□ 1.84
PDLIM1-202ENST00000477757 TBC1D16Q8TBP0 767 aa26.54■■□□□ 1.84
PDLIM1-202ENST00000477757 VIL1P09327 827 aaKnown RBP26.53■■□□□ 1.84
PDLIM1-202ENST00000477757 ZNF428Q96B54 188 aa26.53■■□□□ 1.84
PDLIM1-202ENST00000477757 PLBD2Q8NHP8 589 aa26.52■■□□□ 1.84
PDLIM1-202ENST00000477757 FAM89AQ96GI7 184 aa26.52■■□□□ 1.84
PDLIM1-202ENST00000477757 ISCA1Q9BUE6 129 aa26.52■■□□□ 1.84
PDLIM1-202ENST00000477757 HPS5Q9UPZ3 1129 aa26.52■■□□□ 1.84
PDLIM1-202ENST00000477757 RIPK4P57078 832 aa26.51■■□□□ 1.83
PDLIM1-202ENST00000477757 FKBP1BP68106 108 aa26.51■■□□□ 1.83
PDLIM1-202ENST00000477757 ZNF280AP59817 542 aaPredicted RBP26.5■■□□□ 1.83
PDLIM1-202ENST00000477757 CHPF2Q9P2E5 772 aa26.5■■□□□ 1.83
PDLIM1-202ENST00000477757 PSME4Q14997 1843 aa26.5■■□□□ 1.83
PDLIM1-202ENST00000477757 LMOD3Q0VAK6 560 aa26.49■■□□□ 1.83
PDLIM1-202ENST00000477757 PKN2Q16513 984 aaKnown RBP26.49■■□□□ 1.83
PDLIM1-202ENST00000477757 ANGEL2Q5VTE6 544 aaKnown RBP26.49■■□□□ 1.83
PDLIM1-202ENST00000477757 PODXL2Q9NZ53 605 aa26.49■■□□□ 1.83
PDLIM1-202ENST00000477757 KRT24Q2M2I5 525 aa26.48■■□□□ 1.83
PDLIM1-202ENST00000477757 ZC3H12CQ9C0D7 883 aaKnown RBP26.48■■□□□ 1.83
PDLIM1-202ENST00000477757 PITPNM2Q9BZ72 1349 aa26.47■■□□□ 1.83
PDLIM1-202ENST00000477757 RPS8P62241 208 aaKnown RBP26.47■■□□□ 1.83
PDLIM1-202ENST00000477757 AGBL3Q8NEM8 1001 aa26.47■■□□□ 1.83
PDLIM1-202ENST00000477757 ATP5J2-PTCD1G3V325 749 aa26.46■■□□□ 1.83
PDLIM1-202ENST00000477757 SCARF1Q14162 830 aa26.46■■□□□ 1.83
PDLIM1-202ENST00000477757 RSBN1LQ6PCB5 846 aaPredicted RBP26.46■■□□□ 1.83
PDLIM1-202ENST00000477757 ANKRD13DQ6ZTN6 518 aa26.46■■□□□ 1.83
PDLIM1-202ENST00000477757 IRS4O14654 1257 aaPredicted RBP26.45■■□□□ 1.82
PDLIM1-202ENST00000477757 UFL1O94874 794 aa26.45■■□□□ 1.82
PDLIM1-202ENST00000477757 TMPOP42166 694 aaKnown RBP26.44■■□□□ 1.82
PDLIM1-202ENST00000477757 HDGFL1Q5TGJ6 251 aa26.44■■□□□ 1.82
PDLIM1-202ENST00000477757 ZNF296Q8WUU4 475 aaPredicted RBP26.44■■□□□ 1.82
PDLIM1-202ENST00000477757 G3V3G9 751 aa26.43■■□□□ 1.82
PDLIM1-202ENST00000477757 CHL1O00533 1208 aa26.43■■□□□ 1.82
PDLIM1-202ENST00000477757 TRIM28Q13263 835 aaKnown RBP26.43■■□□□ 1.82
PDLIM1-202ENST00000477757 RTL5Q5HYW3 569 aaPredicted RBP26.43■■□□□ 1.82
PDLIM1-202ENST00000477757 DCAF8Q5TAQ9 597 aa26.43■■□□□ 1.82
PDLIM1-202ENST00000477757 GMLQ99445 158 aa26.43■■□□□ 1.82
PDLIM1-202ENST00000477757 GGA1Q9UJY5 639 aa26.43■■□□□ 1.82
PDLIM1-202ENST00000477757 HDAC9Q9UKV0 1011 aa26.43■■□□□ 1.82
PDLIM1-202ENST00000477757 HOXB7P09629 217 aa26.42■■□□□ 1.82
PDLIM1-202ENST00000477757 NOM1Q5C9Z4 860 aaKnown RBP26.42■■□□□ 1.82
PDLIM1-202ENST00000477757 MYOZ2Q9NPC6 264 aa26.42■■□□□ 1.82
PDLIM1-202ENST00000477757 ANKIB1Q9P2G1 1089 aa26.42■■□□□ 1.82
PDLIM1-202ENST00000477757 DBF4Q9UBU7 674 aaPredicted RBP26.42■■□□□ 1.82
PDLIM1-202ENST00000477757 TBC1D8O95759 1140 aa26.4■■□□□ 1.82
PDLIM1-202ENST00000477757 USP17L8P0C7I0 530 aa26.4■■□□□ 1.82
PDLIM1-202ENST00000477757 SEC31BQ9NQW1 1179 aa26.4■■□□□ 1.82
PDLIM1-202ENST00000477757 MOB2Q70IA6 237 aa26.39■■□□□ 1.82
PDLIM1-202ENST00000477757 HTTP42858 3142 aa26.39■■□□□ 1.82
PDLIM1-202ENST00000477757 HYPKQ9NX55 129 aa26.38■■□□□ 1.81
PDLIM1-202ENST00000477757 UBE2Q2LH0YL09 131 aa26.37■■□□□ 1.81
PDLIM1-202ENST00000477757 GPR25O00155 361 aa26.37■■□□□ 1.81
PDLIM1-202ENST00000477757 HSP90B1P14625 803 aaKnown RBP26.37■■□□□ 1.81
PDLIM1-202ENST00000477757 FBXO46Q6PJ61 603 aaPredicted RBP26.37■■□□□ 1.81
PDLIM1-202ENST00000477757 ZBTB38Q8NAP3 1195 aaPredicted RBP26.37■■□□□ 1.81
PDLIM1-202ENST00000477757 TM4SF4P48230 202 aa26.36■■□□□ 1.81
PDLIM1-202ENST00000477757 XDHP47989 1333 aa26.36■■□□□ 1.81
PDLIM1-202ENST00000477757 USP17L3A6NCW0 530 aa26.35■■□□□ 1.81
PDLIM1-202ENST00000477757 USP17L4A6NCW7 530 aa26.35■■□□□ 1.81
PDLIM1-202ENST00000477757 USP17L1Q7RTZ2 530 aa26.35■■□□□ 1.81
PDLIM1-202ENST00000477757 CFHR5Q9BXR6 569 aa26.35■■□□□ 1.81
PDLIM1-202ENST00000477757 SCAF8Q9UPN6 1271 aaKnown RBP26.35■■□□□ 1.81
PDLIM1-202ENST00000477757 ZNF646O15015 1829 aaPredicted RBP26.35■■□□□ 1.81
PDLIM1-202ENST00000477757 CCDC152Q4G0S7 254 aa26.34■■□□□ 1.81
PDLIM1-202ENST00000477757 PODNQ7Z5L7 613 aa26.34■■□□□ 1.81
PDLIM1-202ENST00000477757 LAS1LQ9Y4W2 734 aaKnown RBP26.34■■□□□ 1.81
PDLIM1-202ENST00000477757 GCC1Q96CN9 775 aa26.33■■□□□ 1.81
PDLIM1-202ENST00000477757 SREBF2Q12772 1141 aa26.32■■□□□ 1.8
PDLIM1-202ENST00000477757 NBPF9Q3BBW0 867 aa26.32■■□□□ 1.8
PDLIM1-202ENST00000477757 PRAMEF18Q5VWM3 479 aa26.32■■□□□ 1.8
PDLIM1-202ENST00000477757 TRIM35Q9UPQ4 493 aa26.32■■□□□ 1.8
PDLIM1-202ENST00000477757 GOLGA2Q08379 1002 aa26.31■■□□□ 1.8
PDLIM1-202ENST00000477757 TTLL12Q14166 644 aaPredicted RBP26.31■■□□□ 1.8
PDLIM1-202ENST00000477757 NEUROD2Q15784 382 aa26.31■■□□□ 1.8
PDLIM1-202ENST00000477757 MKI67P46013 3256 aaKnown RBP26.31■■□□□ 1.8
PDLIM1-202ENST00000477757 MED23Q9ULK4 1368 aa26.31■■□□□ 1.8
PDLIM1-202ENST00000477757 PCCAP05165 728 aaPredicted RBP26.3■■□□□ 1.8
PDLIM1-202ENST00000477757 ATP2B4P23634 1241 aa26.3■■□□□ 1.8
PDLIM1-202ENST00000477757 NF2P35240 595 aa26.3■■□□□ 1.8
PDLIM1-202ENST00000477757 RIC3Q7Z5B4 369 aa26.3■■□□□ 1.8
PDLIM1-202ENST00000477757 PDE8AO60658 829 aa26.29■■□□□ 1.8
PDLIM1-202ENST00000477757 FKTNO75072 461 aa26.29■■□□□ 1.8
PDLIM1-202ENST00000477757 DUSP27Q5VZP5 1158 aa26.29■■□□□ 1.8
PDLIM1-202ENST00000477757 ANKRD18AQ8IVF6 992 aa26.29■■□□□ 1.8
PDLIM1-202ENST00000477757 MKRN3Q13064 507 aaKnown RBP26.28■■□□□ 1.8
PDLIM1-202ENST00000477757 CCDC191Q8NCU4 936 aa26.28■■□□□ 1.8
PDLIM1-202ENST00000477757 WNT10BO00744 389 aa26.27■■□□□ 1.8
PDLIM1-202ENST00000477757 DACT2Q5SW24 774 aa26.27■■□□□ 1.8
PDLIM1-202ENST00000477757 CCDC146Q8IYE0 955 aa26.27■■□□□ 1.8
PDLIM1-202ENST00000477757 CCDC85AQ96PX6 553 aaPredicted RBP26.27■■□□□ 1.8
PDLIM1-202ENST00000477757 MYO3BQ8WXR4 1341 aa26.27■■□□□ 1.8
PDLIM1-202ENST00000477757 OGFOD1Q8N543 542 aa26.26■■□□□ 1.79
PDLIM1-202ENST00000477757 MYD88Q99836 296 aa26.26■■□□□ 1.79
PDLIM1-202ENST00000477757 R3HDMLQ9H3Y0 253 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms