RNA–Protein interactions for RNA: ENST00000477403.1

RPL39-203, Transcript of ribosomal protein L39, humanhuman

TSL 3

Gene RPL39, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-203ENST00000477403 GPLD1P80108 840 aa6.56□□□□□ -1.36
RPL39-203ENST00000477403 TRIM28Q13263 835 aaKnown RBP6.56□□□□□ -1.36
RPL39-203ENST00000477403 TRIP4Q15650 581 aaPredicted RBP6.56□□□□□ -1.36
RPL39-203ENST00000477403 CD163Q86VB7 1156 aa6.56□□□□□ -1.36
RPL39-203ENST00000477403 TRPM4Q8TD43 1214 aa6.56□□□□□ -1.36
RPL39-203ENST00000477403 TLR7Q9NYK1 1049 aaKnown RBP6.56□□□□□ -1.36
RPL39-203ENST00000477403 MMP20O60882 483 aa6.55□□□□□ -1.36
RPL39-203ENST00000477403 EIF2AK2P19525 551 aaKnown RBP6.55□□□□□ -1.36
RPL39-203ENST00000477403 AFF1P51825 1210 aaKnown RBP6.55□□□□□ -1.36
RPL39-203ENST00000477403 PERM1Q5SV97 790 aa6.55□□□□□ -1.36
RPL39-203ENST00000477403 ELMSAN1Q6PJG2 1045 aa6.55□□□□□ -1.36
RPL39-203ENST00000477403 NLRP13Q86W25 1043 aa6.55□□□□□ -1.36
RPL39-203ENST00000477403 LPIN3Q9BQK8 851 aa6.55□□□□□ -1.36
RPL39-203ENST00000477403 APBA3O96018 575 aa6.54□□□□□ -1.36
RPL39-203ENST00000477403 SSFA2P28290 1259 aa6.54□□□□□ -1.36
RPL39-203ENST00000477403 NRLP54845 237 aa6.54□□□□□ -1.36
RPL39-203ENST00000477403 PLAURQ03405 335 aa6.54□□□□□ -1.36
RPL39-203ENST00000477403 NSUN5Q96P11 429 aaKnown RBP6.54□□□□□ -1.36
RPL39-203ENST00000477403 FNDC3AQ9Y2H6 1198 aaKnown RBP6.54□□□□□ -1.36
RPL39-203ENST00000477403 CCDC88BA6NC98 1476 aa6.53□□□□□ -1.36
RPL39-203ENST00000477403 J3QW42 95 aa6.53□□□□□ -1.36
RPL39-203ENST00000477403 GRIK4Q16099 956 aa6.53□□□□□ -1.36
RPL39-203ENST00000477403 ATCAYQ86WG3 371 aa6.53□□□□□ -1.36
RPL39-203ENST00000477403 DMRTC2Q8IXT2 367 aaPredicted RBP6.53□□□□□ -1.36
RPL39-203ENST00000477403 HELQQ8TDG4 1101 aa6.53□□□□□ -1.36
RPL39-203ENST00000477403 GTF3C2Q8WUA4 911 aaPredicted RBP6.53□□□□□ -1.36
RPL39-203ENST00000477403 SMG9Q9H0W8 520 aaKnown RBP6.53□□□□□ -1.36
RPL39-203ENST00000477403 FRRS1LQ9P0K9 344 aa6.53□□□□□ -1.36
RPL39-203ENST00000477403 TDRD9Q8NDG6 1382 aaKnown RBP6.53□□□□□ -1.36
RPL39-203ENST00000477403 SOGA1O94964 1423 aa6.52□□□□□ -1.37
RPL39-203ENST00000477403 A0A0A0MRY4 1105 aa6.52□□□□□ -1.37
RPL39-203ENST00000477403 LOC102724428A0A0B4J2F2 783 aa6.52□□□□□ -1.37
RPL39-203ENST00000477403 GHRHP01286 108 aa6.52□□□□□ -1.37
RPL39-203ENST00000477403 BAG6P46379 1132 aa6.52□□□□□ -1.37
RPL39-203ENST00000477403 SIK1P57059 783 aa6.52□□□□□ -1.37
RPL39-203ENST00000477403 MTMR3Q13615 1198 aa6.52□□□□□ -1.37
RPL39-203ENST00000477403 NUDT16Q96DE0 195 aaKnown RBP6.52□□□□□ -1.37
RPL39-203ENST00000477403 EIF4G3O43432 1585 aaKnown RBP6.52□□□□□ -1.37
RPL39-203ENST00000477403 DNMBPQ6XZF7 1577 aa6.52□□□□□ -1.37
RPL39-203ENST00000477403 MPSTP25325 297 aa6.51□□□□□ -1.37
RPL39-203ENST00000477403 SOX18P35713 384 aa6.51□□□□□ -1.37
RPL39-203ENST00000477403 RAC1P63000 192 aa6.51□□□□□ -1.37
RPL39-203ENST00000477403 DNM1Q05193 864 aaKnown RBP6.51□□□□□ -1.37
RPL39-203ENST00000477403 NOM1Q5C9Z4 860 aaKnown RBP6.51□□□□□ -1.37
RPL39-203ENST00000477403 TTC39BQ5VTQ0 682 aaPredicted RBP6.51□□□□□ -1.37
RPL39-203ENST00000477403 MSL1Q68DK7 614 aa6.51□□□□□ -1.37
RPL39-203ENST00000477403 PLD4Q96BZ4 506 aa6.51□□□□□ -1.37
RPL39-203ENST00000477403 RBSNQ9H1K0 784 aa6.51□□□□□ -1.37
RPL39-203ENST00000477403 POLA1P09884 1462 aaPredicted RBP6.5□□□□□ -1.37
RPL39-203ENST00000477403 GATA4P43694 442 aa6.5□□□□□ -1.37
RPL39-203ENST00000477403 SUZ12Q15022 739 aaKnown RBP6.5□□□□□ -1.37
RPL39-203ENST00000477403 GRIK5Q16478 980 aa6.5□□□□□ -1.37
RPL39-203ENST00000477403 WFDC8Q8IUA0 241 aa6.5□□□□□ -1.37
RPL39-203ENST00000477403 EDEM1Q92611 657 aa6.5□□□□□ -1.37
RPL39-203ENST00000477403 NACC1Q96RE7 527 aa6.5□□□□□ -1.37
RPL39-203ENST00000477403 MTMR7Q9Y216 660 aa6.5□□□□□ -1.37
RPL39-203ENST00000477403 TARBP1Q13395 1621 aaKnown RBP6.5□□□□□ -1.37
RPL39-203ENST00000477403 MAGI1Q96QZ7 1491 aaPredicted RBP6.49□□□□□ -1.37
RPL39-203ENST00000477403 ABL1P00519 1130 aa6.49□□□□□ -1.37
RPL39-203ENST00000477403 EIF1AXP47813 144 aaKnown RBP6.49□□□□□ -1.37
RPL39-203ENST00000477403 AAMPQ13685 434 aa6.49□□□□□ -1.37
RPL39-203ENST00000477403 GDF6Q6KF10 455 aaPredicted RBP6.49□□□□□ -1.37
RPL39-203ENST00000477403 PHLDB3Q6NSJ2 640 aa6.49□□□□□ -1.37
RPL39-203ENST00000477403 ZNF438Q7Z4V0 828 aa6.49□□□□□ -1.37
RPL39-203ENST00000477403 OR13H1Q8NG92 308 aa6.49□□□□□ -1.37
RPL39-203ENST00000477403 TTC9Q92623 222 aa6.49□□□□□ -1.37
RPL39-203ENST00000477403 ABI2Q9NYB9 513 aaPredicted RBP6.49□□□□□ -1.37
RPL39-203ENST00000477403 USTQ9Y2C2 406 aa6.49□□□□□ -1.37
RPL39-203ENST00000477403 GAPVD1Q14C86 1478 aa6.48□□□□□ -1.37
RPL39-203ENST00000477403 FURINP09958 794 aa6.48□□□□□ -1.37
RPL39-203ENST00000477403 HOXD8P13378 290 aaPredicted RBP6.48□□□□□ -1.37
RPL39-203ENST00000477403 ELNP15502 786 aa6.48□□□□□ -1.37
RPL39-203ENST00000477403 PCSK2P16519 638 aa6.48□□□□□ -1.37
RPL39-203ENST00000477403 HYAL2Q12891 473 aa6.48□□□□□ -1.37
RPL39-203ENST00000477403 DOC2BQ14184 412 aa6.48□□□□□ -1.37
RPL39-203ENST00000477403 C8orf34Q49A92 452 aa6.48□□□□□ -1.37
RPL39-203ENST00000477403 COL13A1Q5TAT6 717 aaPredicted RBP6.48□□□□□ -1.37
RPL39-203ENST00000477403 SHISA2Q6UWI4 295 aa6.48□□□□□ -1.37
RPL39-203ENST00000477403 FMR1NBQ8N0W7 255 aaPredicted RBP6.48□□□□□ -1.37
RPL39-203ENST00000477403 TTC16Q8NEE8 873 aa6.48□□□□□ -1.37
RPL39-203ENST00000477403 SPACA7Q96KW9 195 aa6.48□□□□□ -1.37
RPL39-203ENST00000477403 ANO2Q9NQ90 1003 aa6.48□□□□□ -1.37
RPL39-203ENST00000477403 CLASP1Q7Z460 1538 aa6.48□□□□□ -1.37
RPL39-203ENST00000477403 SYNJ1O43426 1573 aa6.48□□□□□ -1.37
RPL39-203ENST00000477403 GRIN2BQ13224 1484 aa6.47□□□□□ -1.37
RPL39-203ENST00000477403 SNAPC4Q5SXM2 1469 aa6.47□□□□□ -1.37
RPL39-203ENST00000477403 RAD54L2Q9Y4B4 1467 aa6.47□□□□□ -1.37
RPL39-203ENST00000477403 A6NHS1 94 aa6.47□□□□□ -1.37
RPL39-203ENST00000477403 C9orf172C9J069 976 aa6.47□□□□□ -1.37
RPL39-203ENST00000477403 PDGFAP04085 211 aa6.47□□□□□ -1.37
RPL39-203ENST00000477403 CYP2E1P05181 493 aaPredicted RBP6.47□□□□□ -1.37
RPL39-203ENST00000477403 ZNF211Q13398 564 aaPredicted RBP6.47□□□□□ -1.37
RPL39-203ENST00000477403 PDE12Q6L8Q7 609 aaKnown RBP6.47□□□□□ -1.37
RPL39-203ENST00000477403 ALKBH2Q6NS38 261 aa6.47□□□□□ -1.37
RPL39-203ENST00000477403 ELP3Q9H9T3 547 aa6.47□□□□□ -1.37
RPL39-203ENST00000477403 TMEM63CQ9P1W3 806 aa6.47□□□□□ -1.37
RPL39-203ENST00000477403 SYNJ2O15056 1496 aa6.47□□□□□ -1.37
RPL39-203ENST00000477403 CHD1O14646 1710 aa6.46□□□□□ -1.38
RPL39-203ENST00000477403 ADAM23O75077 832 aa6.46□□□□□ -1.38
RPL39-203ENST00000477403 RPLP1P05386 114 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms