RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 ANXA1P04083 346 aa20.41■□□□□ 0.86
SMG5-204ENST00000476954 EN2P19622 333 aaPredicted RBP20.41■□□□□ 0.86
SMG5-204ENST00000476954 NLRP10Q86W26 655 aa20.41■□□□□ 0.86
SMG5-204ENST00000476954 CELF1Q92879 486 aaKnown RBP20.41■□□□□ 0.86
SMG5-204ENST00000476954 HTTP42858 3142 aa20.41■□□□□ 0.86
SMG5-204ENST00000476954 CUL9Q8IWT3 2517 aa20.41■□□□□ 0.86
SMG5-204ENST00000476954 DLL1O00548 723 aa20.4■□□□□ 0.86
SMG5-204ENST00000476954 HTATSF1O43719 755 aaKnown RBP20.4■□□□□ 0.86
SMG5-204ENST00000476954 VIL1P09327 827 aaKnown RBP20.4■□□□□ 0.86
SMG5-204ENST00000476954 U2AF1L5P0DN76 240 aaPredicted RBP20.4■□□□□ 0.86
SMG5-204ENST00000476954 U2AF1Q01081 240 aaKnown RBP eCLIP20.4■□□□□ 0.864e-6■□□□□ 11.1
SMG5-204ENST00000476954 PROSER3Q2NL68 480 aa20.4■□□□□ 0.86
SMG5-204ENST00000476954 TRIM17Q9Y577 477 aa20.4■□□□□ 0.86
SMG5-204ENST00000476954 ZNF280AP59817 542 aaPredicted RBP20.39■□□□□ 0.85
SMG5-204ENST00000476954 TTLL12Q14166 644 aaPredicted RBP20.38■□□□□ 0.85
SMG5-204ENST00000476954 PDIA6Q15084 440 aa20.38■□□□□ 0.85
SMG5-204ENST00000476954 OTOP1Q7RTM1 612 aa20.38■□□□□ 0.85
SMG5-204ENST00000476954 TRMT112Q9UI30 125 aaKnown RBP20.38■□□□□ 0.85
SMG5-204ENST00000476954 INTS3Q68E01 1043 aaKnown RBP20.37■□□□□ 0.85
SMG5-204ENST00000476954 TMC4Q7Z404 712 aa20.37■□□□□ 0.85
SMG5-204ENST00000476954 TBC1D16Q8TBP0 767 aa20.37■□□□□ 0.85
SMG5-204ENST00000476954 CFHR5Q9BXR6 569 aa20.37■□□□□ 0.85
SMG5-204ENST00000476954 PSME4Q14997 1843 aa20.37■□□□□ 0.85
SMG5-204ENST00000476954 SH3TC1Q8TE82 1336 aa20.36■□□□□ 0.85
SMG5-204ENST00000476954 SZT2Q5T011 3432 aa20.36■□□□□ 0.85
SMG5-204ENST00000476954 ERBB4Q15303 1308 aa20.34■□□□□ 0.85
SMG5-204ENST00000476954 EIF2S2P20042 333 aaKnown RBP20.34■□□□□ 0.85
SMG5-204ENST00000476954 PTPN12Q05209 780 aaKnown RBP20.34■□□□□ 0.85
SMG5-204ENST00000476954 SREBF2Q12772 1141 aa20.34■□□□□ 0.85
SMG5-204ENST00000476954 PNISRQ8TF01 805 aaKnown RBP20.34■□□□□ 0.85
SMG5-204ENST00000476954 EYA3Q99504 573 aa20.34■□□□□ 0.85
SMG5-204ENST00000476954 MYOZ2Q9NPC6 264 aa20.34■□□□□ 0.85
SMG5-204ENST00000476954 PITPNM2Q9BZ72 1349 aa20.33■□□□□ 0.85
SMG5-204ENST00000476954 PRKG1Q13976 671 aa20.33■□□□□ 0.85
SMG5-204ENST00000476954 RSBN1LQ6PCB5 846 aaPredicted RBP20.33■□□□□ 0.85
SMG5-204ENST00000476954 CFAP53Q96M91 514 aa20.33■□□□□ 0.85
SMG5-204ENST00000476954 NUDCQ9Y266 331 aa20.33■□□□□ 0.85
SMG5-204ENST00000476954 AIMP1Q12904 312 aaKnown RBP20.32■□□□□ 0.84
SMG5-204ENST00000476954 NBPF9Q3BBW0 867 aa20.32■□□□□ 0.84
SMG5-204ENST00000476954 GMLQ99445 158 aa20.32■□□□□ 0.84
SMG5-204ENST00000476954 ZC3H12CQ9C0D7 883 aaKnown RBP20.32■□□□□ 0.84
SMG5-204ENST00000476954 PTPN22Q9Y2R2 807 aa20.32■□□□□ 0.84
SMG5-204ENST00000476954 ZNF609O15014 1411 aa20.31■□□□□ 0.84
SMG5-204ENST00000476954 H0YGN5 161 aa20.31■□□□□ 0.84
SMG5-204ENST00000476954 CAP1Q01518 475 aa20.31■□□□□ 0.84
SMG5-204ENST00000476954 TCIRG1Q13488 830 aa20.31■□□□□ 0.84
SMG5-204ENST00000476954 COPS6Q7L5N1 327 aa20.31■□□□□ 0.84
SMG5-204ENST00000476954 AGBL3Q8NEM8 1001 aa20.31■□□□□ 0.84
SMG5-204ENST00000476954 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.31■□□□□ 0.84
SMG5-204ENST00000476954 USP17L8P0C7I0 530 aa20.3■□□□□ 0.84
SMG5-204ENST00000476954 HSP90AB3PQ58FF7 597 aa20.3■□□□□ 0.84
SMG5-204ENST00000476954 SPRYD7Q5W111 196 aa20.3■□□□□ 0.84
SMG5-204ENST00000476954 SLC17A8Q8NDX2 589 aa20.3■□□□□ 0.84
SMG5-204ENST00000476954 CD99L2Q8TCZ2 262 aa20.3■□□□□ 0.84
SMG5-204ENST00000476954 XAGE3Q8WTP9 111 aa20.3■□□□□ 0.84
SMG5-204ENST00000476954 ARMC5Q96C12 935 aa20.3■□□□□ 0.84
SMG5-204ENST00000476954 OTUD5Q96G74 571 aa20.3■□□□□ 0.84
SMG5-204ENST00000476954 FZD1Q9UP38 647 aa20.3■□□□□ 0.84
SMG5-204ENST00000476954 CENPFP49454 3210 aa20.3■□□□□ 0.84
SMG5-204ENST00000476954 G3V3G9 751 aa20.29■□□□□ 0.84
SMG5-204ENST00000476954 DCAF8Q5TAQ9 597 aa20.29■□□□□ 0.84
SMG5-204ENST00000476954 NECTIN2Q92692 538 aa20.29■□□□□ 0.84
SMG5-204ENST00000476954 UFL1O94874 794 aa20.28■□□□□ 0.84
SMG5-204ENST00000476954 SF3B3Q15393 1217 aaKnown RBP20.28■□□□□ 0.84
SMG5-204ENST00000476954 FAM89AQ96GI7 184 aa20.28■□□□□ 0.84
SMG5-204ENST00000476954 IGF2BP3O00425 579 aaKnown RBP eCLIP20.27■□□□□ 0.84
SMG5-204ENST00000476954 RTL5Q5HYW3 569 aaPredicted RBP20.27■□□□□ 0.84
SMG5-204ENST00000476954 IFNL1Q8IU54 200 aa20.27■□□□□ 0.84
SMG5-204ENST00000476954 MXD3Q9BW11 206 aa20.27■□□□□ 0.84
SMG5-204ENST00000476954 BRCA2P51587 3418 aa20.26■□□□□ 0.83
SMG5-204ENST00000476954 ZNF646O15015 1829 aaPredicted RBP20.26■□□□□ 0.83
SMG5-204ENST00000476954 ALDH1A1P00352 501 aa20.26■□□□□ 0.83
SMG5-204ENST00000476954 CHRDL2Q6WN34 429 aa20.26■□□□□ 0.83
SMG5-204ENST00000476954 NF2P35240 595 aa20.25■□□□□ 0.83
SMG5-204ENST00000476954 RPS8P62241 208 aaKnown RBP20.25■□□□□ 0.83
SMG5-204ENST00000476954 LDLRAD1Q5T700 205 aa20.25■□□□□ 0.83
SMG5-204ENST00000476954 ERO1AQ96HE7 468 aa20.24■□□□□ 0.83
SMG5-204ENST00000476954 TMEM106CQ9BVX2 250 aa20.24■□□□□ 0.83
SMG5-204ENST00000476954 SEC31BQ9NQW1 1179 aa20.24■□□□□ 0.83
SMG5-204ENST00000476954 PODXL2Q9NZ53 605 aa20.24■□□□□ 0.83
SMG5-204ENST00000476954 ANGEL1Q9UNK9 670 aaKnown RBP20.24■□□□□ 0.83
SMG5-204ENST00000476954 SASH1O94885 1247 aa20.23■□□□□ 0.83
SMG5-204ENST00000476954 ARMC9Q7Z3E5 817 aa20.23■□□□□ 0.83
SMG5-204ENST00000476954 ZNF333Q96JL9 665 aa20.23■□□□□ 0.83
SMG5-204ENST00000476954 EFCC1Q9HA90 598 aa20.23■□□□□ 0.83
SMG5-204ENST00000476954 ANKIB1Q9P2G1 1089 aa20.23■□□□□ 0.83
SMG5-204ENST00000476954 GGA1Q9UJY5 639 aa20.23■□□□□ 0.83
SMG5-204ENST00000476954 LAMB1P07942 1786 aa20.23■□□□□ 0.83
SMG5-204ENST00000476954 MANSC4A6NHS7 340 aaPredicted RBP20.22■□□□□ 0.83
SMG5-204ENST00000476954 WTIPA6NIX2 430 aaPredicted RBP20.22■□□□□ 0.83
SMG5-204ENST00000476954 ATP5J2-PTCD1G3V325 749 aa20.22■□□□□ 0.83
SMG5-204ENST00000476954 WNT10BO00744 389 aa20.22■□□□□ 0.83
SMG5-204ENST00000476954 MYCP01106 439 aaPredicted RBP20.22■□□□□ 0.83
SMG5-204ENST00000476954 PPP2R1AP30153 589 aa20.22■□□□□ 0.83
SMG5-204ENST00000476954 CRHR2Q13324 411 aa20.22■□□□□ 0.83
SMG5-204ENST00000476954 CLMNQ96JQ2 1002 aa20.22■□□□□ 0.83
SMG5-204ENST00000476954 RBM27Q9P2N5 1060 aaKnown RBP20.22■□□□□ 0.83
SMG5-204ENST00000476954 TSPYL4Q9UJ04 414 aa20.22■□□□□ 0.83
SMG5-204ENST00000476954 USP17L3A6NCW0 530 aa20.21■□□□□ 0.83
SMG5-204ENST00000476954 USP17L4A6NCW7 530 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms