RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 FAM177BA6PVY3 158 aa27.78■■■□□ 2.04
CCDC7-206ENST00000476558 CNNM1Q9NRU3 951 aa27.78■■■□□ 2.04
CCDC7-206ENST00000476558 ABCC12Q96J65 1359 aa27.78■■■□□ 2.04
CCDC7-206ENST00000476558 IFIT1P09914 478 aaKnown RBP27.78■■■□□ 2.04
CCDC7-206ENST00000476558 DDX46Q7L014 1031 aaKnown RBP27.78■■■□□ 2.04
CCDC7-206ENST00000476558 BCL11BQ9C0K0 894 aaPredicted RBP27.78■■■□□ 2.04
CCDC7-206ENST00000476558 HSP90AA1P07900 732 aaKnown RBP27.77■■■□□ 2.04
CCDC7-206ENST00000476558 CCDC158Q5M9N0 1113 aa27.77■■■□□ 2.04
CCDC7-206ENST00000476558 PDE8BO95263 885 aa27.76■■■□□ 2.04
CCDC7-206ENST00000476558 ATP2B3Q16720 1220 aa27.76■■■□□ 2.04
CCDC7-206ENST00000476558 ZNF589Q86UQ0 364 aaPredicted RBP27.76■■■□□ 2.04
CCDC7-206ENST00000476558 GOLIM4O00461 696 aa27.76■■■□□ 2.03
CCDC7-206ENST00000476558 TAF5LO75529 589 aa27.75■■■□□ 2.03
CCDC7-206ENST00000476558 CCDC152Q4G0S7 254 aa27.75■■■□□ 2.03
CCDC7-206ENST00000476558 SMIM5Q71RC9 77 aa27.75■■■□□ 2.03
CCDC7-206ENST00000476558 RBM8AQ9Y5S9 174 aaKnown RBP27.75■■■□□ 2.03
CCDC7-206ENST00000476558 MROH5Q6ZUA9 1318 aa27.74■■■□□ 2.03
CCDC7-206ENST00000476558 GNPATO15228 680 aa27.74■■■□□ 2.03
CCDC7-206ENST00000476558 ZNF512BQ96KM6 892 aaPredicted RBP27.74■■■□□ 2.03
CCDC7-206ENST00000476558 UPF3BQ9BZI7 483 aaKnown RBP27.74■■■□□ 2.03
CCDC7-206ENST00000476558 C4BP0C0L5 1744 aa27.74■■■□□ 2.03
CCDC7-206ENST00000476558 SEC31BQ9NQW1 1179 aa27.74■■■□□ 2.03
CCDC7-206ENST00000476558 FOXD4L1Q9NU39 408 aa27.74■■■□□ 2.03
CCDC7-206ENST00000476558 CHGBP05060 677 aa27.73■■■□□ 2.03
CCDC7-206ENST00000476558 FGFR2P21802 821 aa27.73■■■□□ 2.03
CCDC7-206ENST00000476558 TTC39AQ5SRH9 613 aa27.73■■■□□ 2.03
CCDC7-206ENST00000476558 GORABQ5T7V8 394 aa27.73■■■□□ 2.03
CCDC7-206ENST00000476558 TBC1D9BQ66K14 1250 aa27.73■■■□□ 2.03
CCDC7-206ENST00000476558 PRPF40BQ6NWY9 871 aaKnown RBP27.73■■■□□ 2.03
CCDC7-206ENST00000476558 TTC14Q96N46 770 aa27.73■■■□□ 2.03
CCDC7-206ENST00000476558 TM6SF1Q9BZW5 370 aa27.73■■■□□ 2.03
CCDC7-206ENST00000476558 COL24A1Q17RW2 1714 aa27.72■■■□□ 2.03
CCDC7-206ENST00000476558 MCMDC2Q4G0Z9 681 aa27.72■■■□□ 2.03
CCDC7-206ENST00000476558 SLC10A5Q5PT55 438 aa27.72■■■□□ 2.03
CCDC7-206ENST00000476558 USPL1Q5W0Q7 1092 aa27.72■■■□□ 2.03
CCDC7-206ENST00000476558 AMIGO3Q86WK7 504 aa27.72■■■□□ 2.03
CCDC7-206ENST00000476558 TMX3Q96JJ7 454 aa27.72■■■□□ 2.03
CCDC7-206ENST00000476558 RTCBQ9Y3I0 505 aaKnown RBP27.72■■■□□ 2.03
CCDC7-206ENST00000476558 ARAP2Q8WZ64 1704 aa27.72■■■□□ 2.03
CCDC7-206ENST00000476558 BRWD3Q6RI45 1802 aa27.72■■■□□ 2.03
CCDC7-206ENST00000476558 CREB3L3Q68CJ9 461 aa27.71■■■□□ 2.03
CCDC7-206ENST00000476558 AKAP11Q9UKA4 1901 aa27.71■■■□□ 2.03
CCDC7-206ENST00000476558 CUL4AQ13619 759 aa27.71■■■□□ 2.03
CCDC7-206ENST00000476558 RAB3GAP1Q15042 981 aa27.71■■■□□ 2.03
CCDC7-206ENST00000476558 ERFEQ4G0M1 354 aa27.71■■■□□ 2.03
CCDC7-206ENST00000476558 SRP68Q9UHB9 627 aaKnown RBP27.71■■■□□ 2.03
CCDC7-206ENST00000476558 CASZ1Q86V15 1759 aa27.7■■■□□ 2.03
CCDC7-206ENST00000476558 SCARF1Q14162 830 aa27.7■■■□□ 2.02
CCDC7-206ENST00000476558 SF3B3Q15393 1217 aaKnown RBP27.7■■■□□ 2.02
CCDC7-206ENST00000476558 ZMYM1Q5SVZ6 1142 aa27.7■■■□□ 2.02
CCDC7-206ENST00000476558 SEC62Q99442 399 aaKnown RBP27.7■■■□□ 2.02
CCDC7-206ENST00000476558 HELLSQ9NRZ9 838 aa27.7■■■□□ 2.02
CCDC7-206ENST00000476558 ARHGEF1Q92888 912 aaKnown RBP27.69■■■□□ 2.02
CCDC7-206ENST00000476558 CWC22Q9HCG8 908 aaKnown RBP27.69■■■□□ 2.02
CCDC7-206ENST00000476558 C4AP0C0L4 1744 aa27.69■■■□□ 2.02
CCDC7-206ENST00000476558 SLC27A2O14975 620 aa27.69■■■□□ 2.02
CCDC7-206ENST00000476558 PUM3Q15397 648 aaKnown RBP27.69■■■□□ 2.02
CCDC7-206ENST00000476558 FAM196AQ6ZSG2 479 aa27.69■■■□□ 2.02
CCDC7-206ENST00000476558 ZSWIM6Q9HCJ5 1215 aa27.69■■■□□ 2.02
CCDC7-206ENST00000476558 LRRC4BQ9NT99 713 aa27.69■■■□□ 2.02
CCDC7-206ENST00000476558 SSFA2P28290 1259 aa27.68■■■□□ 2.02
CCDC7-206ENST00000476558 ADCK5Q3MIX3 580 aa27.68■■■□□ 2.02
CCDC7-206ENST00000476558 TSGA10IPQ3SY00 556 aa27.68■■■□□ 2.02
CCDC7-206ENST00000476558 LPIN2Q92539 896 aa27.68■■■□□ 2.02
CCDC7-206ENST00000476558 RNF113AO15541 343 aaKnown RBP27.67■■■□□ 2.02
CCDC7-206ENST00000476558 ZPR1O75312 459 aa27.67■■■□□ 2.02
CCDC7-206ENST00000476558 MPHOSPH8Q99549 860 aa27.67■■■□□ 2.02
CCDC7-206ENST00000476558 COL4A1P02462 1669 aa27.67■■■□□ 2.02
CCDC7-206ENST00000476558 ZKSCAN1P17029 563 aaPredicted RBP27.67■■■□□ 2.02
CCDC7-206ENST00000476558 FKBP4Q02790 459 aaKnown RBP eCLIP27.67■■■□□ 2.02
CCDC7-206ENST00000476558 C3orf67Q6ZVT6 689 aa27.67■■■□□ 2.02
CCDC7-206ENST00000476558 KRT27Q7Z3Y8 459 aa27.67■■■□□ 2.02
CCDC7-206ENST00000476558 RPAP1Q9BWH6 1393 aaPredicted RBP27.66■■■□□ 2.02
CCDC7-206ENST00000476558 MCAMP43121 646 aa27.66■■■□□ 2.02
CCDC7-206ENST00000476558 CCDC129Q6ZRS4 1044 aa27.66■■■□□ 2.02
CCDC7-206ENST00000476558 ZAP70P43403 619 aa27.65■■■□□ 2.02
CCDC7-206ENST00000476558 KCNJ4P48050 445 aa27.65■■■□□ 2.02
CCDC7-206ENST00000476558 ZGPATQ8N5A5 531 aaKnown RBP27.65■■■□□ 2.02
CCDC7-206ENST00000476558 HELBQ8NG08 1087 aaPredicted RBP27.65■■■□□ 2.02
CCDC7-206ENST00000476558 SETDB2Q96T68 719 aa27.65■■■□□ 2.02
CCDC7-206ENST00000476558 NYXQ9GZU5 481 aa27.65■■■□□ 2.02
CCDC7-206ENST00000476558 HMG20BQ9P0W2 317 aa27.65■■■□□ 2.02
CCDC7-206ENST00000476558 CASTP20810 708 aaKnown RBP27.64■■■□□ 2.02
CCDC7-206ENST00000476558 ARID4AP29374 1257 aaPredicted RBP27.64■■■□□ 2.02
CCDC7-206ENST00000476558 IGHMBP2P38935 993 aaKnown RBP27.64■■■□□ 2.02
CCDC7-206ENST00000476558 RNF20Q5VTR2 975 aa27.64■■■□□ 2.02
CCDC7-206ENST00000476558 BICDL1Q6ZP65 573 aa27.64■■■□□ 2.02
CCDC7-206ENST00000476558 INTS4Q96HW7 963 aaKnown RBP27.64■■■□□ 2.02
CCDC7-206ENST00000476558 JAKMIP1Q96N16 626 aaKnown RBP27.64■■■□□ 2.02
CCDC7-206ENST00000476558 SLFNL1Q499Z3 407 aa27.64■■■□□ 2.01
CCDC7-206ENST00000476558 CCDC102BQ68D86 513 aa27.64■■■□□ 2.01
CCDC7-206ENST00000476558 TNPO1Q92973 898 aaKnown RBP27.64■■■□□ 2.01
CCDC7-206ENST00000476558 MCM4P33991 863 aa27.63■■■□□ 2.01
CCDC7-206ENST00000476558 VPS53Q5VIR6 699 aa27.63■■■□□ 2.01
CCDC7-206ENST00000476558 CDC5LQ99459 802 aaKnown RBP27.63■■■□□ 2.01
CCDC7-206ENST00000476558 ZFYP08048 801 aaPredicted RBP27.62■■■□□ 2.01
CCDC7-206ENST00000476558 LRRFIP1Q32MZ4 808 aaKnown RBP27.62■■■□□ 2.01
CCDC7-206ENST00000476558 TRAPPC3LQ5T215 181 aa27.62■■■□□ 2.01
CCDC7-206ENST00000476558 PI16Q6UXB8 463 aa27.62■■■□□ 2.01
CCDC7-206ENST00000476558 RUFY3Q7L099 469 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms