RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 CNTN3Q9P232 1028 aa9.87□□□□□ -0.83
TM9SF3-204ENST00000475401 FOXD3Q9UJU5 478 aaPredicted RBP9.87□□□□□ -0.83
TM9SF3-204ENST00000475401 AMOTL2Q9Y2J4 779 aa9.87□□□□□ -0.83
TM9SF3-204ENST00000475401 CPNE3O75131 537 aaKnown RBP9.86□□□□□ -0.83
TM9SF3-204ENST00000475401 ELMSAN1Q6PJG2 1045 aa9.86□□□□□ -0.83
TM9SF3-204ENST00000475401 CHSY3Q70JA7 882 aa9.86□□□□□ -0.83
TM9SF3-204ENST00000475401 BTBD6Q96KE9 485 aa9.86□□□□□ -0.83
TM9SF3-204ENST00000475401 DNAJC25Q9H1X3 360 aa9.86□□□□□ -0.83
TM9SF3-204ENST00000475401 TREHO43280 583 aa9.85□□□□□ -0.83
TM9SF3-204ENST00000475401 EDN3P14138 238 aa9.85□□□□□ -0.83
TM9SF3-204ENST00000475401 C1orf229Q6ZS94 237 aaPredicted RBP9.85□□□□□ -0.83
TM9SF3-204ENST00000475401 HFE2Q6ZVN8 426 aa9.85□□□□□ -0.83
TM9SF3-204ENST00000475401 ZFYVE28Q9HCC9 887 aa9.85□□□□□ -0.83
TM9SF3-204ENST00000475401 KANSL3Q9P2N6 904 aa9.85□□□□□ -0.83
TM9SF3-204ENST00000475401 ANKRD33BA6NCL7 494 aa9.84□□□□□ -0.83
TM9SF3-204ENST00000475401 SHISA8B8ZZ34 492 aa9.84□□□□□ -0.83
TM9SF3-204ENST00000475401 RGS9O75916 674 aaPredicted RBP9.84□□□□□ -0.83
TM9SF3-204ENST00000475401 CYP2E1P05181 493 aaPredicted RBP9.84□□□□□ -0.83
TM9SF3-204ENST00000475401 MDFIQ99750 246 aa9.84□□□□□ -0.83
TM9SF3-204ENST00000475401 ZBTB42B2RXF5 422 aa9.83□□□□□ -0.84
TM9SF3-204ENST00000475401 J3QW42 95 aa9.83□□□□□ -0.84
TM9SF3-204ENST00000475401 PIK3R2O00459 728 aa9.83□□□□□ -0.84
TM9SF3-204ENST00000475401 EREGO14944 169 aa9.83□□□□□ -0.84
TM9SF3-204ENST00000475401 MAPK8P45983 427 aa9.83□□□□□ -0.84
TM9SF3-204ENST00000475401 ATP2B2Q01814 1243 aa9.83□□□□□ -0.84
TM9SF3-204ENST00000475401 ORC1Q13415 861 aa9.83□□□□□ -0.84
TM9SF3-204ENST00000475401 PSAPL1Q6NUJ1 521 aa9.83□□□□□ -0.84
TM9SF3-204ENST00000475401 PODNQ7Z5L7 613 aa9.83□□□□□ -0.84
TM9SF3-204ENST00000475401 CSRNP1Q96S65 589 aa9.83□□□□□ -0.84
TM9SF3-204ENST00000475401 CHRDQ9H2X0 955 aa9.83□□□□□ -0.84
TM9SF3-204ENST00000475401 EIF1AYO14602 144 aaKnown RBP9.82□□□□□ -0.84
TM9SF3-204ENST00000475401 KIF4AO95239 1232 aa9.82□□□□□ -0.84
TM9SF3-204ENST00000475401 MFAP1P55081 439 aaKnown RBP9.82□□□□□ -0.84
TM9SF3-204ENST00000475401 FGD1P98174 961 aa9.82□□□□□ -0.84
TM9SF3-204ENST00000475401 JPH1Q9HDC5 661 aaPredicted RBP9.82□□□□□ -0.84
TM9SF3-204ENST00000475401 FRRS1LQ9P0K9 344 aa9.82□□□□□ -0.84
TM9SF3-204ENST00000475401 FAM177BA6PVY3 158 aa9.81□□□□□ -0.84
TM9SF3-204ENST00000475401 LILRB5O75023 590 aa9.81□□□□□ -0.84
TM9SF3-204ENST00000475401 SMNDC1O75940 238 aaKnown RBP eCLIP9.81□□□□□ -0.84
TM9SF3-204ENST00000475401 IGHA2P01877 340 aa9.81□□□□□ -0.84
TM9SF3-204ENST00000475401 DSC3Q14574 896 aa9.81□□□□□ -0.84
TM9SF3-204ENST00000475401 NUDT8Q8WV74 236 aa9.81□□□□□ -0.84
TM9SF3-204ENST00000475401 PLD4Q96BZ4 506 aa9.81□□□□□ -0.84
TM9SF3-204ENST00000475401 SMG9Q9H0W8 520 aaKnown RBP9.81□□□□□ -0.84
TM9SF3-204ENST00000475401 CCDC9Q9Y3X0 531 aaKnown RBP9.81□□□□□ -0.84
TM9SF3-204ENST00000475401 M0R082 166 aa9.8□□□□□ -0.84
TM9SF3-204ENST00000475401 ARHGEF15O94989 841 aa9.8□□□□□ -0.84
TM9SF3-204ENST00000475401 COL19A1Q14993 1142 aa9.8□□□□□ -0.84
TM9SF3-204ENST00000475401 PERM1Q5SV97 790 aa9.8□□□□□ -0.84
TM9SF3-204ENST00000475401 ZNF417Q8TAU3 575 aa9.8□□□□□ -0.84
TM9SF3-204ENST00000475401 ZNF587Q96SQ5 575 aaPredicted RBP9.8□□□□□ -0.84
TM9SF3-204ENST00000475401 SALL4Q9UJQ4 1053 aa9.8□□□□□ -0.84
TM9SF3-204ENST00000475401 NAGPAQ9UK23 515 aa9.8□□□□□ -0.84
TM9SF3-204ENST00000475401 PNMA6FA0A0J9YX94 578 aa9.79□□□□□ -0.84
TM9SF3-204ENST00000475401 FMR1Q06787 632 aaKnown RBP eCLIP9.79□□□□□ -0.84
TM9SF3-204ENST00000475401 COL13A1Q5TAT6 717 aaPredicted RBP9.79□□□□□ -0.84
TM9SF3-204ENST00000475401 DNAJC14Q6Y2X3 702 aaPredicted RBP9.79□□□□□ -0.84
TM9SF3-204ENST00000475401 NLRP2Q9NX02 1062 aa9.79□□□□□ -0.84
TM9SF3-204ENST00000475401 STARD13Q9Y3M8 1113 aa9.79□□□□□ -0.84
TM9SF3-204ENST00000475401 ALBP02768 609 aa9.78□□□□□ -0.84
TM9SF3-204ENST00000475401 POLR3DP05423 398 aaPredicted RBP9.78□□□□□ -0.84
TM9SF3-204ENST00000475401 EAPPQ56P03 285 aaPredicted RBP9.78□□□□□ -0.84
TM9SF3-204ENST00000475401 GALNT12Q8IXK2 581 aa9.78□□□□□ -0.84
TM9SF3-204ENST00000475401 CEP120Q8N960 986 aa9.78□□□□□ -0.84
TM9SF3-204ENST00000475401 MKL2Q9ULH7 1088 aa9.78□□□□□ -0.84
TM9SF3-204ENST00000475401 ADAMTS8Q9UP79 889 aa9.78□□□□□ -0.84
TM9SF3-204ENST00000475401 ENOX2Q16206 610 aaKnown RBP9.77□□□□□ -0.85
TM9SF3-204ENST00000475401 CEP135Q66GS9 1140 aa9.77□□□□□ -0.85
TM9SF3-204ENST00000475401 ALG1LQ6GMV1 187 aa9.77□□□□□ -0.85
TM9SF3-204ENST00000475401 CACTIN-AS1Q8N1I8 211 aa9.77□□□□□ -0.85
TM9SF3-204ENST00000475401 BEND7Q8N7W2 519 aaPredicted RBP9.77□□□□□ -0.85
TM9SF3-204ENST00000475401 TTC9Q92623 222 aa9.77□□□□□ -0.85
TM9SF3-204ENST00000475401 CCDC74AQ96AQ1 378 aa9.77□□□□□ -0.85
TM9SF3-204ENST00000475401 LPIN3Q9BQK8 851 aa9.77□□□□□ -0.85
TM9SF3-204ENST00000475401 PBX4Q9BYU1 374 aa9.77□□□□□ -0.85
TM9SF3-204ENST00000475401 GADD45BO75293 160 aaPredicted RBP9.76□□□□□ -0.85
TM9SF3-204ENST00000475401 P4HBP07237 508 aaKnown RBP9.76□□□□□ -0.85
TM9SF3-204ENST00000475401 LORP23490 312 aaPredicted RBP9.76□□□□□ -0.85
TM9SF3-204ENST00000475401 USPL1Q5W0Q7 1092 aa9.76□□□□□ -0.85
TM9SF3-204ENST00000475401 FBF1Q8TES7 1133 aa9.76□□□□□ -0.85
TM9SF3-204ENST00000475401 SCARF2Q96GP6 870 aaPredicted RBP9.76□□□□□ -0.85
TM9SF3-204ENST00000475401 OSMRQ99650 979 aa9.76□□□□□ -0.85
TM9SF3-204ENST00000475401 BCL11AQ9H165 835 aa9.76□□□□□ -0.85
TM9SF3-204ENST00000475401 PRDM6Q9NQX0 595 aa9.76□□□□□ -0.85
TM9SF3-204ENST00000475401 STK17AQ9UEE5 414 aa9.76□□□□□ -0.85
TM9SF3-204ENST00000475401 LDHBP07195 334 aaKnown RBP9.75□□□□□ -0.85
TM9SF3-204ENST00000475401 DGKGP49619 791 aa9.75□□□□□ -0.85
TM9SF3-204ENST00000475401 GDF6Q6KF10 455 aaPredicted RBP9.75□□□□□ -0.85
TM9SF3-204ENST00000475401 C20orf204Q6ZNR8 217 aa9.75□□□□□ -0.85
TM9SF3-204ENST00000475401 RASSF4Q9H2L5 321 aa9.75□□□□□ -0.85
TM9SF3-204ENST00000475401 PPP4R2Q9NY27 417 aa9.75□□□□□ -0.85
TM9SF3-204ENST00000475401 PODXL2Q9NZ53 605 aa9.75□□□□□ -0.85
TM9SF3-204ENST00000475401 SPDYE3A6NKU9 549 aa9.74□□□□□ -0.85
TM9SF3-204ENST00000475401 GNB5O14775 395 aa9.74□□□□□ -0.85
TM9SF3-204ENST00000475401 ATP11AP98196 1134 aa9.74□□□□□ -0.85
TM9SF3-204ENST00000475401 NPAS4Q8IUM7 802 aa9.74□□□□□ -0.85
TM9SF3-204ENST00000475401 EHD4Q9H223 541 aa9.74□□□□□ -0.85
TM9SF3-204ENST00000475401 NPHS2Q9NP85 383 aa9.74□□□□□ -0.85
TM9SF3-204ENST00000475401 DZANK1Q9NVP4 752 aa9.74□□□□□ -0.85
TM9SF3-204ENST00000475401 PDE2AO00408 941 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms