RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 KRT28Q7Z3Y7 464 aa5.72□□□□□ -1.49
LRCH3-213ENST00000471667 CNKSR1Q969H4 720 aa5.72□□□□□ -1.49
LRCH3-213ENST00000471667 ACDQ96AP0 544 aa5.72□□□□□ -1.49
LRCH3-213ENST00000471667 ABHD8Q96I13 439 aa5.72□□□□□ -1.49
LRCH3-213ENST00000471667 NUCKS1Q9H1E3 243 aaKnown RBP5.72□□□□□ -1.49
LRCH3-213ENST00000471667 SNRKQ9NRH2 765 aa5.72□□□□□ -1.49
LRCH3-213ENST00000471667 TNS3Q68CZ2 1445 aa5.72□□□□□ -1.49
LRCH3-213ENST00000471667 CROCC2H7BZ55 1655 aa5.72□□□□□ -1.49
LRCH3-213ENST00000471667 ARHGEF5Q12774 1597 aa5.72□□□□□ -1.49
LRCH3-213ENST00000471667 LMTK2Q8IWU2 1503 aa5.71□□□□□ -1.5
LRCH3-213ENST00000471667 MYCP01106 439 aaPredicted RBP5.71□□□□□ -1.5
LRCH3-213ENST00000471667 IL2RAP01589 272 aa5.71□□□□□ -1.5
LRCH3-213ENST00000471667 YBX3P16989 372 aaKnown RBP eCLIP5.71□□□□□ -1.5
LRCH3-213ENST00000471667 CTCFP49711 727 aaPredicted RBP5.71□□□□□ -1.5
LRCH3-213ENST00000471667 EVA1CP58658 441 aa5.71□□□□□ -1.5
LRCH3-213ENST00000471667 HTRA3P83110 453 aa5.71□□□□□ -1.5
LRCH3-213ENST00000471667 CENPCQ03188 943 aa5.71□□□□□ -1.5
LRCH3-213ENST00000471667 NEDD1Q8NHV4 660 aa5.71□□□□□ -1.5
LRCH3-213ENST00000471667 ESYT1Q9BSJ8 1104 aa5.71□□□□□ -1.5
LRCH3-213ENST00000471667 PRDM11Q9NQV5 511 aa5.71□□□□□ -1.5
LRCH3-213ENST00000471667 USP35Q9P2H5 1018 aa5.71□□□□□ -1.5
LRCH3-213ENST00000471667 NSFL1CQ9UNZ2 370 aaKnown RBP5.71□□□□□ -1.5
LRCH3-213ENST00000471667 THSD7AQ9UPZ6 1657 aa5.71□□□□□ -1.5
LRCH3-213ENST00000471667 SPATA31A1Q5TZJ5 1347 aa5.71□□□□□ -1.5
LRCH3-213ENST00000471667 CNTNAP5Q8WYK1 1306 aa5.71□□□□□ -1.5
LRCH3-213ENST00000471667 NALCNQ8IZF0 1738 aa5.71□□□□□ -1.5
LRCH3-213ENST00000471667 KIF15Q9NS87 1388 aa5.7□□□□□ -1.5
LRCH3-213ENST00000471667 PHF20L1A8MW92 1017 aa5.7□□□□□ -1.5
LRCH3-213ENST00000471667 RGS19P49795 217 aa5.7□□□□□ -1.5
LRCH3-213ENST00000471667 BEND7Q8N7W2 519 aaPredicted RBP5.7□□□□□ -1.5
LRCH3-213ENST00000471667 CCDC85AQ96PX6 553 aaPredicted RBP5.7□□□□□ -1.5
LRCH3-213ENST00000471667 CDCA7Q9BWT1 371 aaPredicted RBP5.7□□□□□ -1.5
LRCH3-213ENST00000471667 GPAMQ9HCL2 828 aa5.7□□□□□ -1.5
LRCH3-213ENST00000471667 STRN4Q9NRL3 753 aa5.7□□□□□ -1.5
LRCH3-213ENST00000471667 CEP126Q9P2H0 1117 aa5.7□□□□□ -1.5
LRCH3-213ENST00000471667 OVOS2A0A0G2JMS6 1433 aa5.7□□□□□ -1.5
LRCH3-213ENST00000471667 OVOS2A0A0J9YW53 1432 aa5.7□□□□□ -1.5
LRCH3-213ENST00000471667 HFM1A2PYH4 1435 aa5.7□□□□□ -1.5
LRCH3-213ENST00000471667 OVOS2Q6IE36 1432 aa5.7□□□□□ -1.5
LRCH3-213ENST00000471667 TULP4Q9NRJ4 1543 aa5.69□□□□□ -1.5
LRCH3-213ENST00000471667 THBS1P07996 1170 aa5.69□□□□□ -1.5
LRCH3-213ENST00000471667 PHKA2P46019 1235 aa5.69□□□□□ -1.5
LRCH3-213ENST00000471667 TXNRD1Q16881 649 aa5.69□□□□□ -1.5
LRCH3-213ENST00000471667 ZNF326Q5BKZ1 582 aaKnown RBP5.69□□□□□ -1.5
LRCH3-213ENST00000471667 PODNQ7Z5L7 613 aa5.69□□□□□ -1.5
LRCH3-213ENST00000471667 SMC1BQ8NDV3 1235 aa5.69□□□□□ -1.5
LRCH3-213ENST00000471667 NLGN2Q8NFZ4 835 aa5.69□□□□□ -1.5
LRCH3-213ENST00000471667 GCC1Q96CN9 775 aa5.69□□□□□ -1.5
LRCH3-213ENST00000471667 DCAF5Q96JK2 942 aa5.69□□□□□ -1.5
LRCH3-213ENST00000471667 ZSCAN10Q96SZ4 725 aaPredicted RBP5.69□□□□□ -1.5
LRCH3-213ENST00000471667 LRRC4BQ9NT99 713 aa5.69□□□□□ -1.5
LRCH3-213ENST00000471667 HRH3Q9Y5N1 445 aa5.69□□□□□ -1.5
LRCH3-213ENST00000471667 RGPD3A6NKT7 1758 aaPredicted RBP5.69□□□□□ -1.5
LRCH3-213ENST00000471667 RGPD4Q7Z3J3 1758 aa5.69□□□□□ -1.5
LRCH3-213ENST00000471667 METP08581 1390 aa5.68□□□□□ -1.5
LRCH3-213ENST00000471667 CEP162Q5TB80 1403 aa5.68□□□□□ -1.5
LRCH3-213ENST00000471667 A0A1B0GTH6 734 aa5.68□□□□□ -1.5
LRCH3-213ENST00000471667 OIP5O43482 229 aa5.68□□□□□ -1.5
LRCH3-213ENST00000471667 GNASQ5JWF2 1037 aa5.68□□□□□ -1.5
LRCH3-213ENST00000471667 XAGE2Q96GT9 111 aa5.68□□□□□ -1.5
LRCH3-213ENST00000471667 THRAP3Q9Y2W1 955 aaKnown RBP5.68□□□□□ -1.5
LRCH3-213ENST00000471667 GCC2Q8IWJ2 1684 aa5.68□□□□□ -1.5
LRCH3-213ENST00000471667 SBNO1A3KN83 1393 aa5.67□□□□□ -1.5
LRCH3-213ENST00000471667 COL14A1Q05707 1796 aaKnown RBP5.67□□□□□ -1.5
LRCH3-213ENST00000471667 SLC24A1O60721 1099 aa5.67□□□□□ -1.5
LRCH3-213ENST00000471667 GTF2E1P29083 439 aaPredicted RBP5.67□□□□□ -1.5
LRCH3-213ENST00000471667 MAP2K3P46734 347 aa5.67□□□□□ -1.5
LRCH3-213ENST00000471667 PLA2G4EQ3MJ16 856 aa5.67□□□□□ -1.5
LRCH3-213ENST00000471667 TMEM214Q6NUQ4 689 aaKnown RBP5.67□□□□□ -1.5
LRCH3-213ENST00000471667 TCP11L2Q8N4U5 519 aa5.67□□□□□ -1.5
LRCH3-213ENST00000471667 CFHR5Q9BXR6 569 aa5.67□□□□□ -1.5
LRCH3-213ENST00000471667 OXCT2Q9BYC2 517 aaPredicted RBP5.67□□□□□ -1.5
LRCH3-213ENST00000471667 RRP7BPQ9NSQ0 103 aa5.67□□□□□ -1.5
LRCH3-213ENST00000471667 KDM2BQ8NHM5 1336 aa5.67□□□□□ -1.5
LRCH3-213ENST00000471667 NRAPQ86VF7 1730 aa5.66□□□□□ -1.5
LRCH3-213ENST00000471667 KIAA1210Q9ULL0 1709 aa5.66□□□□□ -1.5
LRCH3-213ENST00000471667 TSGA10IPQ3SY00 556 aa5.66□□□□□ -1.5
LRCH3-213ENST00000471667 C4orf17Q53FE4 359 aa5.66□□□□□ -1.5
LRCH3-213ENST00000471667 DOLKQ9UPQ8 538 aa5.66□□□□□ -1.5
LRCH3-213ENST00000471667 TBC1D2BQ9UPU7 963 aa5.66□□□□□ -1.5
LRCH3-213ENST00000471667 PHF24Q9UPV7 400 aa5.66□□□□□ -1.5
LRCH3-213ENST00000471667 CDC42BPGQ6DT37 1551 aa5.65□□□□□ -1.5
LRCH3-213ENST00000471667 DLL1O00548 723 aa5.65□□□□□ -1.5
LRCH3-213ENST00000471667 MSTNO14793 375 aa5.65□□□□□ -1.5
LRCH3-213ENST00000471667 CSB-PGBD3P0DP91 1061 aa5.65□□□□□ -1.5
LRCH3-213ENST00000471667 MSX1P28360 303 aa5.65□□□□□ -1.5
LRCH3-213ENST00000471667 EIF4G2P78344 907 aaKnown RBP eCLIP5.65□□□□□ -1.5
LRCH3-213ENST00000471667 USP4Q13107 963 aa5.65□□□□□ -1.5
LRCH3-213ENST00000471667 UBAP2LQ14157 1087 aaKnown RBP5.65□□□□□ -1.5
LRCH3-213ENST00000471667 LBRQ14739 615 aaKnown RBP5.65□□□□□ -1.5
LRCH3-213ENST00000471667 PGBD3Q8N328 593 aa5.65□□□□□ -1.5
LRCH3-213ENST00000471667 PHTF2Q8N3S3 785 aa5.65□□□□□ -1.5
LRCH3-213ENST00000471667 RUBCNLQ9H714 662 aa5.65□□□□□ -1.5
LRCH3-213ENST00000471667 CD2APQ9Y5K6 639 aa5.65□□□□□ -1.5
LRCH3-213ENST00000471667 KIF1AQ12756 1690 aa5.65□□□□□ -1.51
LRCH3-213ENST00000471667 TECPR2O15040 1411 aa5.65□□□□□ -1.51
LRCH3-213ENST00000471667 PRAG1Q86YV5 1406 aa5.65□□□□□ -1.51
LRCH3-213ENST00000471667 SHISA8B8ZZ34 492 aa5.64□□□□□ -1.51
LRCH3-213ENST00000471667 FOXN1O15353 648 aa5.64□□□□□ -1.51
LRCH3-213ENST00000471667 STAU1O95793 577 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms