RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 NUCB1Q02818 461 aa10.38□□□□□ -0.75
FDPS-209ENST00000471117 DZIP3Q86Y13 1208 aaKnown RBP10.38□□□□□ -0.75
FDPS-209ENST00000471117 CCDC24Q8N4L8 307 aa10.38□□□□□ -0.75
FDPS-209ENST00000471117 MPNDQ8N594 471 aa10.38□□□□□ -0.75
FDPS-209ENST00000471117 MYD88Q99836 296 aa10.38□□□□□ -0.75
FDPS-209ENST00000471117 BACH2Q9BYV9 841 aa10.38□□□□□ -0.75
FDPS-209ENST00000471117 DCTPP1Q9H773 170 aa10.38□□□□□ -0.75
FDPS-209ENST00000471117 ZNF408Q9H9D4 720 aa10.38□□□□□ -0.75
FDPS-209ENST00000471117 BCORQ6W2J9 1755 aa10.38□□□□□ -0.75
FDPS-209ENST00000471117 COL15A1P39059 1388 aa10.38□□□□□ -0.75
FDPS-209ENST00000471117 ERVV-1B6SEH8 477 aa10.37□□□□□ -0.75
FDPS-209ENST00000471117 HMMRO75330 724 aa10.37□□□□□ -0.75
FDPS-209ENST00000471117 UBTFL1P0CB47 393 aaPredicted RBP10.37□□□□□ -0.75
FDPS-209ENST00000471117 NOGQ13253 232 aa10.37□□□□□ -0.75
FDPS-209ENST00000471117 HSP90AB3PQ58FF7 597 aa10.37□□□□□ -0.75
FDPS-209ENST00000471117 ANKRD45Q5TZF3 282 aa10.37□□□□□ -0.75
FDPS-209ENST00000471117 CHD1LQ86WJ1 897 aa10.37□□□□□ -0.75
FDPS-209ENST00000471117 ZNF277Q9NRM2 450 aaPredicted RBP10.37□□□□□ -0.75
FDPS-209ENST00000471117 RNF186Q9NXI6 227 aa10.37□□□□□ -0.75
FDPS-209ENST00000471117 HDAC5Q9UQL6 1122 aa10.37□□□□□ -0.75
FDPS-209ENST00000471117 LRRFIP2Q9Y608 721 aaKnown RBP10.37□□□□□ -0.75
FDPS-209ENST00000471117 IBTKQ9P2D0 1353 aaPredicted RBP10.37□□□□□ -0.75
FDPS-209ENST00000471117 NEURL1BA8MQ27 555 aa10.36□□□□□ -0.75
FDPS-209ENST00000471117 EPS15P42566 896 aa10.36□□□□□ -0.75
FDPS-209ENST00000471117 ATP8B2P98198 1209 aa10.36□□□□□ -0.75
FDPS-209ENST00000471117 CWF19L2Q2TBE0 894 aaKnown RBP10.36□□□□□ -0.75
FDPS-209ENST00000471117 GIGYF2Q6Y7W6 1299 aaKnown RBP10.36□□□□□ -0.75
FDPS-209ENST00000471117 LNPKQ9C0E8 428 aa10.36□□□□□ -0.75
FDPS-209ENST00000471117 C9orf78Q9NZ63 289 aaPredicted RBP10.36□□□□□ -0.75
FDPS-209ENST00000471117 TBC1D2BQ9UPU7 963 aa10.36□□□□□ -0.75
FDPS-209ENST00000471117 GJA3Q9Y6H8 435 aa10.36□□□□□ -0.75
FDPS-209ENST00000471117 SCN7AQ01118 1682 aa10.35□□□□□ -0.75
FDPS-209ENST00000471117 IGKV5-2P06315 115 aa10.35□□□□□ -0.75
FDPS-209ENST00000471117 TCIRG1Q13488 830 aa10.35□□□□□ -0.75
FDPS-209ENST00000471117 HHIPL1Q96JK4 782 aa10.35□□□□□ -0.75
FDPS-209ENST00000471117 CWC25Q9NXE8 425 aaPredicted RBP10.35□□□□□ -0.75
FDPS-209ENST00000471117 SAGE1Q9NXZ1 904 aa10.35□□□□□ -0.75
FDPS-209ENST00000471117 ZNF652Q9Y2D9 606 aa10.35□□□□□ -0.75
FDPS-209ENST00000471117 POTEFA5A3E0 1075 aa10.34□□□□□ -0.75
FDPS-209ENST00000471117 ATP5J2-PTCD1G3V325 749 aa10.34□□□□□ -0.75
FDPS-209ENST00000471117 GRM8O00222 908 aa10.34□□□□□ -0.75
FDPS-209ENST00000471117 RGL2O15211 777 aa10.34□□□□□ -0.75
FDPS-209ENST00000471117 CAMTA2O94983 1202 aa10.34□□□□□ -0.75
FDPS-209ENST00000471117 NBPF7P0C2Y1 421 aaPredicted RBP10.34□□□□□ -0.75
FDPS-209ENST00000471117 LMOD1P29536 600 aaPredicted RBP10.34□□□□□ -0.75
FDPS-209ENST00000471117 KIF23Q02241 960 aaPredicted RBP10.34□□□□□ -0.75
FDPS-209ENST00000471117 GCKRQ14397 625 aa10.34□□□□□ -0.75
FDPS-209ENST00000471117 CCDC191Q8NCU4 936 aa10.34□□□□□ -0.75
FDPS-209ENST00000471117 ISCA1Q9BUE6 129 aa10.34□□□□□ -0.75
FDPS-209ENST00000471117 HDAC9Q9UKV0 1011 aa10.34□□□□□ -0.75
FDPS-209ENST00000471117 PAPPA2Q9BXP8 1791 aa10.34□□□□□ -0.75
FDPS-209ENST00000471117 PNMA6EA0A0J9YXQ4 647 aa10.33□□□□□ -0.76
FDPS-209ENST00000471117 TRIM28Q13263 835 aaKnown RBP10.33□□□□□ -0.76
FDPS-209ENST00000471117 PKN2Q16513 984 aaKnown RBP10.33□□□□□ -0.76
FDPS-209ENST00000471117 HLFQ16534 295 aa10.33□□□□□ -0.76
FDPS-209ENST00000471117 C8orf34Q49A92 452 aa10.33□□□□□ -0.76
FDPS-209ENST00000471117 PRPF40BQ6NWY9 871 aaKnown RBP10.33□□□□□ -0.76
FDPS-209ENST00000471117 CLEC4GQ6UXB4 293 aa10.33□□□□□ -0.76
FDPS-209ENST00000471117 GPC2Q8N158 579 aa10.33□□□□□ -0.76
FDPS-209ENST00000471117 COL25A1Q9BXS0 654 aaPredicted RBP10.33□□□□□ -0.76
FDPS-209ENST00000471117 GLIS2Q9BZE0 524 aaPredicted RBP10.33□□□□□ -0.76
FDPS-209ENST00000471117 ZBTB47Q9UFB7 747 aaPredicted RBP10.33□□□□□ -0.76
FDPS-209ENST00000471117 NARFQ9UHQ1 456 aa10.33□□□□□ -0.76
FDPS-209ENST00000471117 UTYO14607 1347 aa10.33□□□□□ -0.76
FDPS-209ENST00000471117 HUNKP57058 714 aa10.32□□□□□ -0.76
FDPS-209ENST00000471117 PPP1R42Q7Z4L9 355 aa10.32□□□□□ -0.76
FDPS-209ENST00000471117 SSH3Q8TE77 659 aa10.32□□□□□ -0.76
FDPS-209ENST00000471117 MYH3P11055 1940 aa10.32□□□□□ -0.76
FDPS-209ENST00000471117 FZD9O00144 591 aa10.31□□□□□ -0.76
FDPS-209ENST00000471117 APBB1O00213 710 aa10.31□□□□□ -0.76
FDPS-209ENST00000471117 SMARCA5O60264 1052 aaPredicted RBP10.31□□□□□ -0.76
FDPS-209ENST00000471117 GPTP24298 496 aa10.31□□□□□ -0.76
FDPS-209ENST00000471117 PDE6BP35913 854 aa10.31□□□□□ -0.76
FDPS-209ENST00000471117 POLA2Q14181 598 aa10.31□□□□□ -0.76
FDPS-209ENST00000471117 PARP10Q53GL7 1025 aa10.31□□□□□ -0.76
FDPS-209ENST00000471117 SOGA3Q5TF21 947 aa10.31□□□□□ -0.76
FDPS-209ENST00000471117 OLFM4Q6UX06 510 aa10.31□□□□□ -0.76
FDPS-209ENST00000471117 UBE3BQ7Z3V4 1068 aa10.31□□□□□ -0.76
FDPS-209ENST00000471117 NLRP10Q86W26 655 aa10.31□□□□□ -0.76
FDPS-209ENST00000471117 ZNF34Q8IZ26 560 aa10.31□□□□□ -0.76
FDPS-209ENST00000471117 CNKSR1Q969H4 720 aa10.31□□□□□ -0.76
FDPS-209ENST00000471117 BCL2L12Q9HB09 334 aa10.31□□□□□ -0.76
FDPS-209ENST00000471117 EXOC6BQ9Y2D4 811 aa10.31□□□□□ -0.76
FDPS-209ENST00000471117 COL6A3P12111 3177 aa10.3□□□□□ -0.76
FDPS-209ENST00000471117 FAM155AB1AL88 458 aaPredicted RBP10.3□□□□□ -0.76
FDPS-209ENST00000471117 H0YGN5 161 aa10.3□□□□□ -0.76
FDPS-209ENST00000471117 H7C1W4 665 aa10.3□□□□□ -0.76
FDPS-209ENST00000471117 SRGAP3O43295 1099 aa10.3□□□□□ -0.76
FDPS-209ENST00000471117 FKBP4Q02790 459 aaKnown RBP eCLIP10.3□□□□□ -0.76
FDPS-209ENST00000471117 CCDC93Q567U6 631 aa10.3□□□□□ -0.76
FDPS-209ENST00000471117 CHRDL2Q6WN34 429 aa10.3□□□□□ -0.76
FDPS-209ENST00000471117 OTUD5Q96G74 571 aa10.3□□□□□ -0.76
FDPS-209ENST00000471117 SUCLG2Q96I99 432 aa10.3□□□□□ -0.76
FDPS-209ENST00000471117 BRIP1Q9BX63 1249 aa10.3□□□□□ -0.76
FDPS-209ENST00000471117 NIP7Q9Y221 180 aaKnown RBP eCLIP10.3□□□□□ -0.76
FDPS-209ENST00000471117 POLR2AP24928 1970 aaKnown RBP10.29□□□□□ -0.76
FDPS-209ENST00000471117 PCCAP05165 728 aaPredicted RBP10.29□□□□□ -0.76
FDPS-209ENST00000471117 IARSP41252 1262 aaKnown RBP10.29□□□□□ -0.76
FDPS-209ENST00000471117 SCNN1DP51172 638 aa10.29□□□□□ -0.76
FDPS-209ENST00000471117 MTX1Q13505 466 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms