RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 CLK2P49760 499 aaKnown RBP7.14□□□□□ -1.27
HDAC8-216ENST00000470998 EXOSC9Q06265 439 aaKnown RBP7.14□□□□□ -1.27
HDAC8-216ENST00000470998 HDAC1Q13547 482 aaPredicted RBP7.14□□□□□ -1.27
HDAC8-216ENST00000470998 MTMR2Q13614 643 aa7.14□□□□□ -1.27
HDAC8-216ENST00000470998 MSS51Q4VC12 460 aa7.14□□□□□ -1.27
HDAC8-216ENST00000470998 MYSM1Q5VVJ2 828 aa7.14□□□□□ -1.27
HDAC8-216ENST00000470998 RETREG3Q86VR2 466 aa7.14□□□□□ -1.27
HDAC8-216ENST00000470998 PIGBQ92521 554 aa7.14□□□□□ -1.27
HDAC8-216ENST00000470998 FRAT1Q92837 279 aaPredicted RBP7.14□□□□□ -1.27
HDAC8-216ENST00000470998 THAP11Q96EK4 314 aa7.14□□□□□ -1.27
HDAC8-216ENST00000470998 IPO9Q96P70 1041 aaKnown RBP7.14□□□□□ -1.27
HDAC8-216ENST00000470998 API5Q9BZZ5 524 aaKnown RBP7.14□□□□□ -1.27
HDAC8-216ENST00000470998 TMOD3Q9NYL9 352 aa7.14□□□□□ -1.27
HDAC8-216ENST00000470998 QSER1Q2KHR3 1735 aa7.13□□□□□ -1.27
HDAC8-216ENST00000470998 DOT1LQ8TEK3 1739 aa7.13□□□□□ -1.27
HDAC8-216ENST00000470998 LOC102724428A0A0B4J2F2 783 aa7.13□□□□□ -1.27
HDAC8-216ENST00000470998 ERVV-2B6SEH9 535 aa7.13□□□□□ -1.27
HDAC8-216ENST00000470998 RNF223E7ERA6 249 aa7.13□□□□□ -1.27
HDAC8-216ENST00000470998 SSFA2P28290 1259 aa7.13□□□□□ -1.27
HDAC8-216ENST00000470998 KCNQ4P56696 695 aa7.13□□□□□ -1.27
HDAC8-216ENST00000470998 SIK1P57059 783 aa7.13□□□□□ -1.27
HDAC8-216ENST00000470998 COL23A1Q86Y22 540 aaPredicted RBP7.13□□□□□ -1.27
HDAC8-216ENST00000470998 ANKLE1Q8NAG6 615 aa7.13□□□□□ -1.27
HDAC8-216ENST00000470998 DCAF5Q96JK2 942 aa7.13□□□□□ -1.27
HDAC8-216ENST00000470998 ZBTB3Q9H5J0 574 aa7.13□□□□□ -1.27
HDAC8-216ENST00000470998 POLR3EQ9NVU0 708 aa7.13□□□□□ -1.27
HDAC8-216ENST00000470998 LY75O60449 1722 aa7.13□□□□□ -1.27
HDAC8-216ENST00000470998 SHANK3Q9BYB0 1731 aa7.13□□□□□ -1.27
HDAC8-216ENST00000470998 SPTLC1O15269 473 aa7.12□□□□□ -1.27
HDAC8-216ENST00000470998 GRIN3BO60391 1043 aa7.12□□□□□ -1.27
HDAC8-216ENST00000470998 TRIM27P14373 513 aa7.12□□□□□ -1.27
HDAC8-216ENST00000470998 SSH1Q8WYL5 1049 aa7.12□□□□□ -1.27
HDAC8-216ENST00000470998 SYMPKQ92797 1274 aaKnown RBP7.12□□□□□ -1.27
HDAC8-216ENST00000470998 TSR2Q969E8 191 aaKnown RBP7.12□□□□□ -1.27
HDAC8-216ENST00000470998 PRDM9Q9NQV7 894 aa7.12□□□□□ -1.27
HDAC8-216ENST00000470998 COG6Q9Y2V7 657 aa7.12□□□□□ -1.27
HDAC8-216ENST00000470998 NOP58Q9Y2X3 529 aaKnown RBP7.12□□□□□ -1.27
HDAC8-216ENST00000470998 CD2APQ9Y5K6 639 aa7.12□□□□□ -1.27
HDAC8-216ENST00000470998 PKD1L3Q7Z443 1732 aa7.12□□□□□ -1.27
HDAC8-216ENST00000470998 RGPD2P0DJD1 1756 aa7.11□□□□□ -1.27
HDAC8-216ENST00000470998 ABCC4O15439 1325 aa7.11□□□□□ -1.27
HDAC8-216ENST00000470998 PTPRCP08575 1304 aa7.11□□□□□ -1.27
HDAC8-216ENST00000470998 HMOX1P09601 288 aa7.11□□□□□ -1.27
HDAC8-216ENST00000470998 GPR162Q16538 588 aa7.11□□□□□ -1.27
HDAC8-216ENST00000470998 SH3D19Q5HYK7 790 aa7.11□□□□□ -1.27
HDAC8-216ENST00000470998 C1orf141Q5JVX7 400 aa7.11□□□□□ -1.27
HDAC8-216ENST00000470998 PRPF38BQ5VTL8 546 aaKnown RBP7.11□□□□□ -1.27
HDAC8-216ENST00000470998 SULT6B1Q6IMI4 303 aa7.11□□□□□ -1.27
HDAC8-216ENST00000470998 FAM160A2Q8N612 972 aaPredicted RBP7.11□□□□□ -1.27
HDAC8-216ENST00000470998 IL27Q8NEV9 243 aa7.11□□□□□ -1.27
HDAC8-216ENST00000470998 PANK1Q8TE04 598 aa7.11□□□□□ -1.27
HDAC8-216ENST00000470998 TSC1Q92574 1164 aa7.11□□□□□ -1.27
HDAC8-216ENST00000470998 ATG3Q9NT62 314 aa7.11□□□□□ -1.27
HDAC8-216ENST00000470998 PCDHGC3Q9UN70 934 aa7.11□□□□□ -1.27
HDAC8-216ENST00000470998 FCF1Q9Y324 198 aaKnown RBP7.11□□□□□ -1.27
HDAC8-216ENST00000470998 KAT6BQ8WYB5 2073 aa7.11□□□□□ -1.27
HDAC8-216ENST00000470998 COL24A1Q17RW2 1714 aa7.1□□□□□ -1.27
HDAC8-216ENST00000470998 CHL1O00533 1208 aa7.1□□□□□ -1.27
HDAC8-216ENST00000470998 PPEF1O14829 653 aaPredicted RBP7.1□□□□□ -1.27
HDAC8-216ENST00000470998 ZBTB24O43167 697 aaPredicted RBP7.1□□□□□ -1.27
HDAC8-216ENST00000470998 VAMP4O75379 141 aa7.1□□□□□ -1.27
HDAC8-216ENST00000470998 TWISTNBQ3B726 338 aaPredicted RBP7.1□□□□□ -1.27
HDAC8-216ENST00000470998 RC3H1Q5TC82 1133 aaKnown RBP7.1□□□□□ -1.27
HDAC8-216ENST00000470998 ZNF530Q6P9A1 599 aaPredicted RBP7.1□□□□□ -1.27
HDAC8-216ENST00000470998 CCDC24Q8N4L8 307 aa7.1□□□□□ -1.27
HDAC8-216ENST00000470998 RTF1Q92541 710 aaKnown RBP7.1□□□□□ -1.27
HDAC8-216ENST00000470998 PHACTR3Q96KR7 559 aa7.1□□□□□ -1.27
HDAC8-216ENST00000470998 PRKD2Q9BZL6 878 aa7.1□□□□□ -1.27
HDAC8-216ENST00000470998 UPF2Q9HAU5 1272 aaKnown RBP7.1□□□□□ -1.27
HDAC8-216ENST00000470998 MBIPQ9NS73 344 aa7.1□□□□□ -1.27
HDAC8-216ENST00000470998 LIMD1Q9UGP4 676 aa7.1□□□□□ -1.27
HDAC8-216ENST00000470998 ASAP1Q9ULH1 1129 aa7.1□□□□□ -1.27
HDAC8-216ENST00000470998 CNTNAP4Q9C0A0 1308 aa7.09□□□□□ -1.27
HDAC8-216ENST00000470998 RLBP1P12271 317 aa7.09□□□□□ -1.27
HDAC8-216ENST00000470998 JUNDP17535 347 aa7.09□□□□□ -1.27
HDAC8-216ENST00000470998 CABP4P57796 275 aa7.09□□□□□ -1.27
HDAC8-216ENST00000470998 SKIV2LQ15477 1246 aaKnown RBP7.09□□□□□ -1.27
HDAC8-216ENST00000470998 AKAP4Q5JQC9 854 aa7.09□□□□□ -1.27
HDAC8-216ENST00000470998 ITPRIPQ8IWB1 547 aa7.09□□□□□ -1.27
HDAC8-216ENST00000470998 SMC5Q8IY18 1101 aa7.09□□□□□ -1.27
HDAC8-216ENST00000470998 LINC00116Q8NCU8 138 aa7.09□□□□□ -1.27
HDAC8-216ENST00000470998 PRR7Q8TB68 274 aa7.09□□□□□ -1.27
HDAC8-216ENST00000470998 GCC1Q96CN9 775 aa7.09□□□□□ -1.27
HDAC8-216ENST00000470998 PCMTD1Q96MG8 357 aaPredicted RBP7.09□□□□□ -1.27
HDAC8-216ENST00000470998 ZBTB40Q9NUA8 1239 aa7.09□□□□□ -1.27
HDAC8-216ENST00000470998 RTCBQ9Y3I0 505 aaKnown RBP7.09□□□□□ -1.27
HDAC8-216ENST00000470998 MAP2P11137 1827 aaKnown RBP7.08□□□□□ -1.28
HDAC8-216ENST00000470998 HOXB7P09629 217 aa7.08□□□□□ -1.28
HDAC8-216ENST00000470998 ITPK1Q13572 414 aa7.08□□□□□ -1.28
HDAC8-216ENST00000470998 C8orf34Q49A92 452 aa7.08□□□□□ -1.28
HDAC8-216ENST00000470998 TRAPPC3LQ5T215 181 aa7.08□□□□□ -1.28
HDAC8-216ENST00000470998 NLGN1Q8N2Q7 840 aa7.08□□□□□ -1.28
HDAC8-216ENST00000470998 ZNF784Q8NCA9 323 aaPredicted RBP7.08□□□□□ -1.28
HDAC8-216ENST00000470998 HELBQ8NG08 1087 aaPredicted RBP7.08□□□□□ -1.28
HDAC8-216ENST00000470998 BCL2L13Q9BXK5 485 aa7.08□□□□□ -1.28
HDAC8-216ENST00000470998 NOB1Q9ULX3 412 aaKnown RBP7.08□□□□□ -1.28
HDAC8-216ENST00000470998 PCDHB15Q9Y5E8 787 aa7.08□□□□□ -1.28
HDAC8-216ENST00000470998 V9GY48 417 aaPredicted RBP7.08□□□□□ -1.28
HDAC8-216ENST00000470998 C4BP0C0L5 1744 aa7.07□□□□□ -1.28
HDAC8-216ENST00000470998 PXDNLA1KZ92 1463 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms