RNA–Protein interactions for RNA: ENST00000469159.1

NCSTN-212, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 856 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-212ENST00000469159 RBM27Q9P2N5 1060 aaKnown RBP10.62□□□□□ -0.71
NCSTN-212ENST00000469159 POLLQ9UGP5 575 aa10.62□□□□□ -0.71
NCSTN-212ENST00000469159 NSFL1CQ9UNZ2 370 aaKnown RBP10.62□□□□□ -0.71
NCSTN-212ENST00000469159 HCLS1P14317 486 aaPredicted RBP10.61□□□□□ -0.71
NCSTN-212ENST00000469159 PRKAR2BP31323 418 aa10.61□□□□□ -0.71
NCSTN-212ENST00000469159 INHBEP58166 350 aa10.61□□□□□ -0.71
NCSTN-212ENST00000469159 TAF7Q15545 349 aaPredicted RBP10.61□□□□□ -0.71
NCSTN-212ENST00000469159 AGBL3Q8NEM8 1001 aa10.61□□□□□ -0.71
NCSTN-212ENST00000469159 LAMB4A4D0S4 1761 aa10.61□□□□□ -0.71
NCSTN-212ENST00000469159 ANKRD36CQ5JPF3 1778 aa10.61□□□□□ -0.71
NCSTN-212ENST00000469159 LRRC37AA6NMS7 1700 aa10.61□□□□□ -0.71
NCSTN-212ENST00000469159 ZNF609O15014 1411 aa10.6□□□□□ -0.71
NCSTN-212ENST00000469159 C6orf229H3BNL8 230 aa10.6□□□□□ -0.71
NCSTN-212ENST00000469159 HTATSF1O43719 755 aaKnown RBP10.6□□□□□ -0.71
NCSTN-212ENST00000469159 PTPN12Q05209 780 aaKnown RBP10.6□□□□□ -0.71
NCSTN-212ENST00000469159 TCIRG1Q13488 830 aa10.6□□□□□ -0.71
NCSTN-212ENST00000469159 TTLL12Q14166 644 aaPredicted RBP10.6□□□□□ -0.71
NCSTN-212ENST00000469159 DCTN1Q14203 1278 aa10.6□□□□□ -0.71
NCSTN-212ENST00000469159 PRAMEF18Q5VWM3 479 aa10.6□□□□□ -0.71
NCSTN-212ENST00000469159 IFNL1Q8IU54 200 aa10.6□□□□□ -0.71
NCSTN-212ENST00000469159 ERO1AQ96HE7 468 aa10.6□□□□□ -0.71
NCSTN-212ENST00000469159 ZNF333Q96JL9 665 aa10.6□□□□□ -0.71
NCSTN-212ENST00000469159 EYA3Q99504 573 aa10.6□□□□□ -0.71
NCSTN-212ENST00000469159 RSPH6AQ9H0K4 717 aa10.6□□□□□ -0.71
NCSTN-212ENST00000469159 MYOZ2Q9NPC6 264 aa10.6□□□□□ -0.71
NCSTN-212ENST00000469159 MIS18AQ9NYP9 233 aa10.6□□□□□ -0.71
NCSTN-212ENST00000469159 SCAF8Q9UPN6 1271 aaKnown RBP10.6□□□□□ -0.71
NCSTN-212ENST00000469159 LAMA3Q16787 3333 aa10.6□□□□□ -0.71
NCSTN-212ENST00000469159 LAMB2P55268 1798 aa10.6□□□□□ -0.71
NCSTN-212ENST00000469159 GPSM2P81274 684 aa10.59□□□□□ -0.71
NCSTN-212ENST00000469159 SPRYD7Q5W111 196 aa10.59□□□□□ -0.71
NCSTN-212ENST00000469159 RSBN1LQ6PCB5 846 aaPredicted RBP10.59□□□□□ -0.71
NCSTN-212ENST00000469159 GMLQ99445 158 aa10.59□□□□□ -0.71
NCSTN-212ENST00000469159 EFCC1Q9HA90 598 aa10.59□□□□□ -0.71
NCSTN-212ENST00000469159 SCN9AQ15858 1988 aa10.58□□□□□ -0.72
NCSTN-212ENST00000469159 MANSC4A6NHS7 340 aaPredicted RBP10.58□□□□□ -0.72
NCSTN-212ENST00000469159 USP17L8P0C7I0 530 aa10.58□□□□□ -0.72
NCSTN-212ENST00000469159 NF2P35240 595 aa10.58□□□□□ -0.72
NCSTN-212ENST00000469159 LDLRAD1Q5T700 205 aa10.58□□□□□ -0.72
NCSTN-212ENST00000469159 NLRP10Q86W26 655 aa10.58□□□□□ -0.72
NCSTN-212ENST00000469159 TBC1D16Q8TBP0 767 aa10.58□□□□□ -0.72
NCSTN-212ENST00000469159 CD99L2Q8TCZ2 262 aa10.58□□□□□ -0.72
NCSTN-212ENST00000469159 PRO3102Q9H379 93 aa10.58□□□□□ -0.72
NCSTN-212ENST00000469159 DDX60Q8IY21 1712 aaKnown RBP10.58□□□□□ -0.72
NCSTN-212ENST00000469159 ERBB4Q15303 1308 aa10.58□□□□□ -0.72
NCSTN-212ENST00000469159 TAF1P21675 1872 aa10.57□□□□□ -0.72
NCSTN-212ENST00000469159 HSPA5P11021 654 aaKnown RBP10.57□□□□□ -0.72
NCSTN-212ENST00000469159 EIF4A1P60842 406 aaKnown RBP10.57□□□□□ -0.72
NCSTN-212ENST00000469159 EIF4G2P78344 907 aaKnown RBP eCLIP10.57□□□□□ -0.72
NCSTN-212ENST00000469159 ARMC9Q7Z3E5 817 aa10.57□□□□□ -0.72
NCSTN-212ENST00000469159 LRP10Q7Z4F1 713 aa10.57□□□□□ -0.72
NCSTN-212ENST00000469159 NBPF11Q86T75 865 aa10.57□□□□□ -0.72
NCSTN-212ENST00000469159 CELF1Q92879 486 aaKnown RBP10.57□□□□□ -0.72
NCSTN-212ENST00000469159 ZC3H12CQ9C0D7 883 aaKnown RBP10.57□□□□□ -0.72
NCSTN-212ENST00000469159 TRMT112Q9UI30 125 aaKnown RBP10.57□□□□□ -0.72
NCSTN-212ENST00000469159 SH3TC1Q8TE82 1336 aa10.57□□□□□ -0.72
NCSTN-212ENST00000469159 IGF2BP3O00425 579 aaKnown RBP eCLIP10.56□□□□□ -0.722e-6■■■□□ 14.8
NCSTN-212ENST00000469159 PER1O15534 1290 aaPredicted RBP10.56□□□□□ -0.72
NCSTN-212ENST00000469159 CAP1Q01518 475 aa10.56□□□□□ -0.72
NCSTN-212ENST00000469159 SLC4A8Q2Y0W8 1093 aa10.56□□□□□ -0.72
NCSTN-212ENST00000469159 NBPF9Q3BBW0 867 aa10.56□□□□□ -0.72
NCSTN-212ENST00000469159 SLC9C1Q4G0N8 1177 aa10.56□□□□□ -0.72
NCSTN-212ENST00000469159 CC2D1BQ5T0F9 858 aaKnown RBP10.56□□□□□ -0.72
NCSTN-212ENST00000469159 PPP4R3CPQ6ZMV5 832 aa10.56□□□□□ -0.72
NCSTN-212ENST00000469159 PNISRQ8TF01 805 aaKnown RBP10.56□□□□□ -0.72
NCSTN-212ENST00000469159 TIMELESSQ9UNS1 1208 aa10.56□□□□□ -0.72
NCSTN-212ENST00000469159 UNC80Q8N2C7 3258 aa10.55□□□□□ -0.72
NCSTN-212ENST00000469159 G3V3G9 751 aa10.55□□□□□ -0.72
NCSTN-212ENST00000469159 ZBTB48P10074 688 aaPredicted RBP10.55□□□□□ -0.72
NCSTN-212ENST00000469159 SP3Q02447 781 aa10.55□□□□□ -0.72
NCSTN-212ENST00000469159 CRHR2Q13324 411 aa10.55□□□□□ -0.72
NCSTN-212ENST00000469159 PDIA6Q15084 440 aa10.55□□□□□ -0.72
NCSTN-212ENST00000469159 SF3B3Q15393 1217 aaKnown RBP10.55□□□□□ -0.72
NCSTN-212ENST00000469159 HSP90AB3PQ58FF7 597 aa10.55□□□□□ -0.72
NCSTN-212ENST00000469159 DCAF8Q5TAQ9 597 aa10.55□□□□□ -0.72
NCSTN-212ENST00000469159 PODXL2Q9NZ53 605 aa10.55□□□□□ -0.72
NCSTN-212ENST00000469159 KDM3BQ7LBC6 1761 aa10.54□□□□□ -0.72
NCSTN-212ENST00000469159 PRKG1Q13976 671 aa10.54□□□□□ -0.72
NCSTN-212ENST00000469159 DPF3Q92784 378 aa10.54□□□□□ -0.72
NCSTN-212ENST00000469159 SLC10A4Q96EP9 437 aa10.54□□□□□ -0.72
NCSTN-212ENST00000469159 THUMPD2Q9BTF0 503 aaKnown RBP10.54□□□□□ -0.72
NCSTN-212ENST00000469159 A0A1W2PPC1 479 aa10.53□□□□□ -0.72
NCSTN-212ENST00000469159 WTIPA6NIX2 430 aaPredicted RBP10.53□□□□□ -0.72
NCSTN-212ENST00000469159 WNT10BO00744 389 aa10.53□□□□□ -0.72
NCSTN-212ENST00000469159 OTUD7BQ6GQQ9 843 aa10.53□□□□□ -0.72
NCSTN-212ENST00000469159 ANGEL1Q9UNK9 670 aaKnown RBP10.53□□□□□ -0.72
NCSTN-212ENST00000469159 PTCH2Q9Y6C5 1203 aa10.53□□□□□ -0.72
NCSTN-212ENST00000469159 USP17L3A6NCW0 530 aa10.52□□□□□ -0.73
NCSTN-212ENST00000469159 USP17L4A6NCW7 530 aa10.52□□□□□ -0.73
NCSTN-212ENST00000469159 SOX1O00570 391 aaPredicted RBP10.52□□□□□ -0.73
NCSTN-212ENST00000469159 UFL1O94874 794 aa10.52□□□□□ -0.73
NCSTN-212ENST00000469159 RPS8P62241 208 aaKnown RBP10.52□□□□□ -0.73
NCSTN-212ENST00000469159 ARHGEF6Q15052 776 aa10.52□□□□□ -0.73
NCSTN-212ENST00000469159 MAP3K11Q16584 847 aa10.52□□□□□ -0.73
NCSTN-212ENST00000469159 USP17L1Q7RTZ2 530 aa10.52□□□□□ -0.73
NCSTN-212ENST00000469159 WNK4Q96J92 1243 aa10.52□□□□□ -0.73
NCSTN-212ENST00000469159 COL4A1P02462 1669 aa10.52□□□□□ -0.73
NCSTN-212ENST00000469159 TESPA1A2RU30 521 aaPredicted RBP10.51□□□□□ -0.73
NCSTN-212ENST00000469159 UNCXA6NJT0 531 aa10.51□□□□□ -0.73
NCSTN-212ENST00000469159 MYCP01106 439 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms