RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 SENP3-EIF4A1A0A087X0R7 540 aa5.68□□□□□ -1.5
TMEM39A-204ENST00000468545 PTSQ03393 145 aa5.68□□□□□ -1.5
TMEM39A-204ENST00000468545 C1orf53Q5VUE5 145 aa5.68□□□□□ -1.5
TMEM39A-204ENST00000468545 ANKLE2Q86XL3 938 aa5.68□□□□□ -1.5
TMEM39A-204ENST00000468545 SLC26A8Q96RN1 970 aa5.68□□□□□ -1.5
TMEM39A-204ENST00000468545 MKNK1Q9BUB5 465 aa5.68□□□□□ -1.5
TMEM39A-204ENST00000468545 C14orf93Q9H972 538 aaKnown RBP5.68□□□□□ -1.5
TMEM39A-204ENST00000468545 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.68□□□□□ -1.5
TMEM39A-204ENST00000468545 TRAK1Q9UPV9 953 aa5.68□□□□□ -1.5
TMEM39A-204ENST00000468545 PARP3Q9Y6F1 533 aa5.68□□□□□ -1.5
TMEM39A-204ENST00000468545 ADGRB3O60242 1522 aa5.68□□□□□ -1.5
TMEM39A-204ENST00000468545 TMEM2Q9UHN6 1383 aa5.67□□□□□ -1.5
TMEM39A-204ENST00000468545 TMEM131LA2VDJ0 1609 aa5.67□□□□□ -1.5
TMEM39A-204ENST00000468545 UHRF1BP1Q6BDS2 1440 aa5.67□□□□□ -1.5
TMEM39A-204ENST00000468545 PRAG1Q86YV5 1406 aa5.67□□□□□ -1.5
TMEM39A-204ENST00000468545 NLRP1Q9C000 1473 aa5.67□□□□□ -1.5
TMEM39A-204ENST00000468545 SLC35F4A4IF30 521 aa5.67□□□□□ -1.5
TMEM39A-204ENST00000468545 PATL2C9JE40 543 aaKnown RBP5.67□□□□□ -1.5
TMEM39A-204ENST00000468545 TATP17735 454 aaPredicted RBP5.67□□□□□ -1.5
TMEM39A-204ENST00000468545 ATP4AP20648 1035 aa5.67□□□□□ -1.5
TMEM39A-204ENST00000468545 TXLNAP40222 546 aa5.67□□□□□ -1.5
TMEM39A-204ENST00000468545 INSM1Q01101 510 aaPredicted RBP5.67□□□□□ -1.5
TMEM39A-204ENST00000468545 KCNA1Q09470 495 aa5.67□□□□□ -1.5
TMEM39A-204ENST00000468545 SAFB2Q14151 953 aaKnown RBP eCLIP5.67□□□□□ -1.5
TMEM39A-204ENST00000468545 ALDH16A1Q8IZ83 802 aa5.67□□□□□ -1.5
TMEM39A-204ENST00000468545 KCTD17Q8N5Z5 321 aa5.67□□□□□ -1.5
TMEM39A-204ENST00000468545 AIDAQ96BJ3 306 aa5.67□□□□□ -1.5
TMEM39A-204ENST00000468545 PHACTR1Q9C0D0 580 aa5.67□□□□□ -1.5
TMEM39A-204ENST00000468545 MTMR7Q9Y216 660 aa5.67□□□□□ -1.5
TMEM39A-204ENST00000468545 GPC6Q9Y625 555 aaPredicted RBP5.67□□□□□ -1.5
TMEM39A-204ENST00000468545 MYO5BQ9ULV0 1848 aa5.67□□□□□ -1.5
TMEM39A-204ENST00000468545 ST20-MTHFSA0A0A6YYL1 179 aa5.66□□□□□ -1.5
TMEM39A-204ENST00000468545 H3BM21 787 aa5.66□□□□□ -1.5
TMEM39A-204ENST00000468545 F11P03951 625 aa5.66□□□□□ -1.5
TMEM39A-204ENST00000468545 MSX1P28360 303 aa5.66□□□□□ -1.5
TMEM39A-204ENST00000468545 RTN1Q16799 776 aa5.66□□□□□ -1.5
TMEM39A-204ENST00000468545 NPAS3Q8IXF0 933 aa5.66□□□□□ -1.5
TMEM39A-204ENST00000468545 CCDC155Q8N6L0 562 aa5.66□□□□□ -1.5
TMEM39A-204ENST00000468545 IRF7Q92985 503 aa5.66□□□□□ -1.5
TMEM39A-204ENST00000468545 QTRT2Q9H974 415 aaKnown RBP5.66□□□□□ -1.5
TMEM39A-204ENST00000468545 HCN4Q9Y3Q4 1203 aa5.66□□□□□ -1.5
TMEM39A-204ENST00000468545 NEXMIFQ5QGS0 1516 aa5.65□□□□□ -1.5
TMEM39A-204ENST00000468545 ARID4AP29374 1257 aaPredicted RBP5.65□□□□□ -1.5
TMEM39A-204ENST00000468545 GMPRP36959 345 aa5.65□□□□□ -1.5
TMEM39A-204ENST00000468545 HIF1AQ16665 826 aa5.65□□□□□ -1.5
TMEM39A-204ENST00000468545 C16orf46Q6P387 395 aa5.65□□□□□ -1.5
TMEM39A-204ENST00000468545 RHPN1Q8TCX5 695 aa5.65□□□□□ -1.5
TMEM39A-204ENST00000468545 MYO19Q96H55 970 aa5.65□□□□□ -1.5
TMEM39A-204ENST00000468545 NGLY1Q96IV0 654 aa5.65□□□□□ -1.5
TMEM39A-204ENST00000468545 GAS2L1Q99501 681 aaPredicted RBP5.65□□□□□ -1.5
TMEM39A-204ENST00000468545 CRISPLD1Q9H336 500 aa5.65□□□□□ -1.5
TMEM39A-204ENST00000468545 GPAMQ9HCL2 828 aa5.65□□□□□ -1.5
TMEM39A-204ENST00000468545 POGKQ9P215 609 aa5.65□□□□□ -1.5
TMEM39A-204ENST00000468545 ERBB4Q15303 1308 aa5.65□□□□□ -1.51
TMEM39A-204ENST00000468545 USP47Q96K76 1375 aa5.65□□□□□ -1.51
TMEM39A-204ENST00000468545 CEP170BQ9Y4F5 1589 aaPredicted RBP5.64□□□□□ -1.51
TMEM39A-204ENST00000468545 SETD1BQ9UPS6 1966 aaKnown RBP5.64□□□□□ -1.51
TMEM39A-204ENST00000468545 MYO3AQ8NEV4 1616 aa5.64□□□□□ -1.51
TMEM39A-204ENST00000468545 SCNN1AP37088 669 aa5.64□□□□□ -1.51
TMEM39A-204ENST00000468545 DDX10Q13206 875 aaKnown RBP5.64□□□□□ -1.51
TMEM39A-204ENST00000468545 LBRQ14739 615 aaKnown RBP5.64□□□□□ -1.51
TMEM39A-204ENST00000468545 BICDL1Q6ZP65 573 aa5.64□□□□□ -1.51
TMEM39A-204ENST00000468545 CAPN12Q6ZSI9 719 aa5.64□□□□□ -1.51
TMEM39A-204ENST00000468545 WAPLQ7Z5K2 1190 aa5.64□□□□□ -1.51
TMEM39A-204ENST00000468545 PGBD3Q8N328 593 aa5.64□□□□□ -1.51
TMEM39A-204ENST00000468545 STK17AQ9UEE5 414 aa5.64□□□□□ -1.51
TMEM39A-204ENST00000468545 SEPT3Q9UH03 358 aa5.64□□□□□ -1.51
TMEM39A-204ENST00000468545 GNEQ9Y223 722 aaKnown RBP5.64□□□□□ -1.51
TMEM39A-204ENST00000468545 UBR1Q8IWV7 1749 aa5.64□□□□□ -1.51
TMEM39A-204ENST00000468545 PPLO60437 1756 aa5.64□□□□□ -1.51
TMEM39A-204ENST00000468545 ZFYVE9O95405 1425 aa5.64□□□□□ -1.51
TMEM39A-204ENST00000468545 MYOM2P54296 1465 aa5.64□□□□□ -1.51
TMEM39A-204ENST00000468545 RALGAPBQ86X10 1494 aa5.64□□□□□ -1.51
TMEM39A-204ENST00000468545 NEURL4Q96JN8 1562 aa5.63□□□□□ -1.51
TMEM39A-204ENST00000468545 H7C1W4 665 aa5.63□□□□□ -1.51
TMEM39A-204ENST00000468545 ITGA6P23229 1130 aa5.63□□□□□ -1.51
TMEM39A-204ENST00000468545 CNGB1Q14028 1251 aaPredicted RBP5.63□□□□□ -1.51
TMEM39A-204ENST00000468545 ARSJQ5FYB0 599 aaPredicted RBP5.63□□□□□ -1.51
TMEM39A-204ENST00000468545 RIPOR1Q6ZS17 1223 aa5.63□□□□□ -1.51
TMEM39A-204ENST00000468545 AEBP1Q8IUX7 1158 aa5.63□□□□□ -1.51
TMEM39A-204ENST00000468545 HELQQ8TDG4 1101 aa5.63□□□□□ -1.51
TMEM39A-204ENST00000468545 C7orf43Q8WVR3 580 aa5.63□□□□□ -1.51
TMEM39A-204ENST00000468545 GMCL1Q96IK5 515 aa5.63□□□□□ -1.51
TMEM39A-204ENST00000468545 PRAM1Q96QH2 718 aa5.63□□□□□ -1.51
TMEM39A-204ENST00000468545 ZIC5Q96T25 663 aa5.63□□□□□ -1.51
TMEM39A-204ENST00000468545 RUBCNLQ9H714 662 aa5.63□□□□□ -1.51
TMEM39A-204ENST00000468545 EGFL7Q9UHF1 273 aa5.63□□□□□ -1.51
TMEM39A-204ENST00000468545 AMOTL2Q9Y2J4 779 aa5.63□□□□□ -1.51
TMEM39A-204ENST00000468545 TBX22Q9Y458 520 aa5.63□□□□□ -1.51
TMEM39A-204ENST00000468545 METP08581 1390 aa5.63□□□□□ -1.51
TMEM39A-204ENST00000468545 PLEKHG1Q9ULL1 1385 aa5.63□□□□□ -1.51
TMEM39A-204ENST00000468545 PIK3C2GO75747 1445 aa5.63□□□□□ -1.51
TMEM39A-204ENST00000468545 A0A1W2PNR3 127 aa5.62□□□□□ -1.51
TMEM39A-204ENST00000468545 PPFIA3O75145 1194 aa5.62□□□□□ -1.51
TMEM39A-204ENST00000468545 TMF1P82094 1093 aa5.62□□□□□ -1.51
TMEM39A-204ENST00000468545 NAA30Q147X3 362 aaPredicted RBP5.62□□□□□ -1.51
TMEM39A-204ENST00000468545 EFHC2Q5JST6 749 aa5.62□□□□□ -1.51
TMEM39A-204ENST00000468545 COX20Q5RI15 118 aa5.62□□□□□ -1.51
TMEM39A-204ENST00000468545 NLRP8Q86W28 1048 aa5.62□□□□□ -1.51
TMEM39A-204ENST00000468545 TRIM22Q8IYM9 498 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms