RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 NBPF11Q86T75 865 aa8.5□□□□□ -1.05
SMC4-207ENST00000467263 C1orf115Q9H7X2 142 aa8.5□□□□□ -1.05
SMC4-207ENST00000467263 SUPT5HO00267 1087 aaKnown RBP8.49□□□□□ -1.05
SMC4-207ENST00000467263 TNFRSF10BO14763 440 aa8.49□□□□□ -1.05
SMC4-207ENST00000467263 PSAPP07602 524 aa8.49□□□□□ -1.05
SMC4-207ENST00000467263 PRR23CQ6ZRP0 262 aa8.49□□□□□ -1.05
SMC4-207ENST00000467263 DZIP1LQ8IYY4 767 aaKnown RBP8.49□□□□□ -1.05
SMC4-207ENST00000467263 AGGF1Q8N302 714 aaeCLIP8.49□□□□□ -1.05
SMC4-207ENST00000467263 MKNK1Q9BUB5 465 aa8.49□□□□□ -1.05
SMC4-207ENST00000467263 CCDC97Q96F63 343 aaPredicted RBP8.48□□□□□ -1.05
SMC4-207ENST00000467263 AKTIPQ9H8T0 292 aa8.48□□□□□ -1.05
SMC4-207ENST00000467263 ACIN1Q9UKV3 1341 aaKnown RBP8.48□□□□□ -1.05
SMC4-207ENST00000467263 F8W735 103 aaPredicted RBP8.47□□□□□ -1.05
SMC4-207ENST00000467263 HOXD8P13378 290 aaPredicted RBP8.47□□□□□ -1.05
SMC4-207ENST00000467263 CCDC82Q8N4S0 544 aa8.47□□□□□ -1.05
SMC4-207ENST00000467263 ZBTB39O15060 712 aa8.46□□□□□ -1.06
SMC4-207ENST00000467263 GHRHP01286 108 aa8.46□□□□□ -1.06
SMC4-207ENST00000467263 ARID4AP29374 1257 aaPredicted RBP8.46□□□□□ -1.06
SMC4-207ENST00000467263 SOX18P35713 384 aa8.46□□□□□ -1.06
SMC4-207ENST00000467263 SRPK2P78362 688 aaKnown RBP8.46□□□□□ -1.06
SMC4-207ENST00000467263 ATP11AP98196 1134 aa8.46□□□□□ -1.06
SMC4-207ENST00000467263 NAA30Q147X3 362 aaPredicted RBP8.46□□□□□ -1.06
SMC4-207ENST00000467263 C16orf46Q6P387 395 aa8.46□□□□□ -1.06
SMC4-207ENST00000467263 TXNDC11Q6PKC3 985 aa8.46□□□□□ -1.06
SMC4-207ENST00000467263 GALNT11Q8NCW6 608 aa8.46□□□□□ -1.06
SMC4-207ENST00000467263 KRTAP4-12Q9BQ66 201 aa8.46□□□□□ -1.06
SMC4-207ENST00000467263 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMC4-207ENST00000467263 WISP1O95388 367 aa8.45□□□□□ -1.06
SMC4-207ENST00000467263 SWI5Q1ZZU3 235 aa8.45□□□□□ -1.06
SMC4-207ENST00000467263 NLRP13Q86W25 1043 aa8.45□□□□□ -1.06
SMC4-207ENST00000467263 TMEM130Q8N3G9 435 aa8.45□□□□□ -1.06
SMC4-207ENST00000467263 SERPINA10Q9UK55 444 aa8.45□□□□□ -1.06
SMC4-207ENST00000467263 RNF112Q9ULX5 631 aa8.45□□□□□ -1.06
SMC4-207ENST00000467263 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.44□□□□□ -1.06
SMC4-207ENST00000467263 TM4SF5O14894 197 aa8.44□□□□□ -1.06
SMC4-207ENST00000467263 KRTAP1-3Q8IUG1 177 aa8.44□□□□□ -1.06
SMC4-207ENST00000467263 UBL7Q96S82 380 aaPredicted RBP8.44□□□□□ -1.06
SMC4-207ENST00000467263 MRPL18Q9H0U6 180 aaKnown RBP8.44□□□□□ -1.06
SMC4-207ENST00000467263 KCNK4Q9NYG8 393 aa8.44□□□□□ -1.06
SMC4-207ENST00000467263 SLAIN2Q9P270 581 aa8.44□□□□□ -1.06
SMC4-207ENST00000467263 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.44□□□□□ -1.06
SMC4-207ENST00000467263 UBAP1LF5GYI3 381 aa8.43□□□□□ -1.06
SMC4-207ENST00000467263 CYP2E1P05181 493 aaPredicted RBP8.43□□□□□ -1.06
SMC4-207ENST00000467263 BRD2P25440 801 aaKnown RBP8.43□□□□□ -1.06
SMC4-207ENST00000467263 Q6ZS46 218 aa8.43□□□□□ -1.06
SMC4-207ENST00000467263 OR13H1Q8NG92 308 aa8.43□□□□□ -1.06
SMC4-207ENST00000467263 LACRTQ9GZZ8 138 aa8.43□□□□□ -1.06
SMC4-207ENST00000467263 CXXC1Q9P0U4 656 aaPredicted RBP8.43□□□□□ -1.06
SMC4-207ENST00000467263 LINC01387J3KSC0 135 aa8.42□□□□□ -1.06
SMC4-207ENST00000467263 FSTP19883 344 aa8.42□□□□□ -1.06
SMC4-207ENST00000467263 CDC25BP30305 580 aa8.42□□□□□ -1.06
SMC4-207ENST00000467263 ZAP70P43403 619 aa8.41□□□□□ -1.06
SMC4-207ENST00000467263 ELOAQ14241 798 aaKnown RBP8.41□□□□□ -1.06
SMC4-207ENST00000467263 TMEM164Q5U3C3 297 aa8.41□□□□□ -1.06
SMC4-207ENST00000467263 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.41□□□□□ -1.06
SMC4-207ENST00000467263 GPR152Q8TDT2 470 aa8.41□□□□□ -1.06
SMC4-207ENST00000467263 PPME1Q9Y570 386 aa8.41□□□□□ -1.06
SMC4-207ENST00000467263 MED26O95402 600 aa8.4□□□□□ -1.06
SMC4-207ENST00000467263 GLB1P16278 677 aa8.4□□□□□ -1.06
SMC4-207ENST00000467263 SSTR4P31391 388 aa8.4□□□□□ -1.06
SMC4-207ENST00000467263 CEP135Q66GS9 1140 aa8.4□□□□□ -1.06
SMC4-207ENST00000467263 CARD10Q9BWT7 1032 aa8.4□□□□□ -1.06
SMC4-207ENST00000467263 RASSF4Q9H2L5 321 aa8.4□□□□□ -1.06
SMC4-207ENST00000467263 PIK3R5Q8WYR1 880 aa8.39□□□□□ -1.07
SMC4-207ENST00000467263 COL26A1Q96A83 441 aa8.39□□□□□ -1.07
SMC4-207ENST00000467263 ARID3AQ99856 593 aa8.39□□□□□ -1.07
SMC4-207ENST00000467263 RBSNQ9H1K0 784 aa8.39□□□□□ -1.07
SMC4-207ENST00000467263 DDX3YO15523 660 aaKnown RBP8.38□□□□□ -1.07
SMC4-207ENST00000467263 ARMC10Q8N2F6 343 aa8.38□□□□□ -1.07
SMC4-207ENST00000467263 SH2B1Q9NRF2 756 aaPredicted RBP8.38□□□□□ -1.07
SMC4-207ENST00000467263 SEPT3Q9UH03 358 aa8.38□□□□□ -1.07
SMC4-207ENST00000467263 EPHA1P21709 976 aa8.37□□□□□ -1.07
SMC4-207ENST00000467263 HYAL2Q12891 473 aa8.37□□□□□ -1.07
SMC4-207ENST00000467263 ATCAYQ86WG3 371 aa8.37□□□□□ -1.07
SMC4-207ENST00000467263 SRA1Q9HD15 236 aaKnown RBP8.37□□□□□ -1.07
SMC4-207ENST00000467263 ADAM11O75078 769 aa8.36□□□□□ -1.07
SMC4-207ENST00000467263 ACPPP15309 386 aa8.36□□□□□ -1.07
SMC4-207ENST00000467263 SCNN1AP37088 669 aa8.36□□□□□ -1.07
SMC4-207ENST00000467263 LCE3BQ5TA77 95 aa8.36□□□□□ -1.07
SMC4-207ENST00000467263 KIAA1211Q6ZU35 1233 aa8.36□□□□□ -1.07
SMC4-207ENST00000467263 MAP4K3Q8IVH8 894 aa8.36□□□□□ -1.07
SMC4-207ENST00000467263 PCMTD2Q9NV79 361 aa8.36□□□□□ -1.07
SMC4-207ENST00000467263 TMEM63CQ9P1W3 806 aa8.36□□□□□ -1.07
SMC4-207ENST00000467263 RAXQ9Y2V3 346 aa8.36□□□□□ -1.07
SMC4-207ENST00000467263 KIF4AO95239 1232 aa8.35□□□□□ -1.07
SMC4-207ENST00000467263 ATG7O95352 703 aa8.35□□□□□ -1.07
SMC4-207ENST00000467263 TGFB1P01137 390 aa8.35□□□□□ -1.07
SMC4-207ENST00000467263 CDC27P30260 824 aa8.35□□□□□ -1.07
SMC4-207ENST00000467263 CD68P34810 354 aaPredicted RBP8.35□□□□□ -1.07
SMC4-207ENST00000467263 CD97P48960 835 aa8.35□□□□□ -1.07
SMC4-207ENST00000467263 TTC39BQ5VTQ0 682 aaPredicted RBP8.35□□□□□ -1.07
SMC4-207ENST00000467263 ACAD11Q709F0 780 aa8.35□□□□□ -1.07
SMC4-207ENST00000467263 KRTAP19-1Q8IUB9 90 aa8.35□□□□□ -1.07
SMC4-207ENST00000467263 CEP120Q8N960 986 aa8.35□□□□□ -1.07
SMC4-207ENST00000467263 FOXD4L4Q8WXT5 416 aaPredicted RBP8.35□□□□□ -1.07
SMC4-207ENST00000467263 PBXIP1Q96AQ6 731 aa8.35□□□□□ -1.07
SMC4-207ENST00000467263 POP1Q99575 1024 aaKnown RBP8.35□□□□□ -1.07
SMC4-207ENST00000467263 CNTN3Q9P232 1028 aa8.35□□□□□ -1.07
SMC4-207ENST00000467263 STIM2Q9P246 746 aa8.35□□□□□ -1.07
SMC4-207ENST00000467263 KANSL3Q9P2N6 904 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms