RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 EDC3Q96F86 508 aaKnown RBP25.57■■□□□ 1.68
PPP1R3F-203ENST00000466508 DNAJC2Q99543 621 aaKnown RBP25.57■■□□□ 1.68
PPP1R3F-203ENST00000466508 LSG1Q9H089 658 aaKnown RBP25.57■■□□□ 1.68
PPP1R3F-203ENST00000466508 CD2BP2O95400 341 aaKnown RBP25.56■■□□□ 1.68
PPP1R3F-203ENST00000466508 VGLL2Q8N8G2 317 aa25.56■■□□□ 1.68
PPP1R3F-203ENST00000466508 SLC27A3Q5K4L6 730 aa25.55■■□□□ 1.68
PPP1R3F-203ENST00000466508 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.55■■□□□ 1.68
PPP1R3F-203ENST00000466508 IL17RAQ96F46 866 aa25.55■■□□□ 1.68
PPP1R3F-203ENST00000466508 NMIQ13287 307 aaPredicted RBP25.55■■□□□ 1.68
PPP1R3F-203ENST00000466508 ATP2B3Q16720 1220 aa25.55■■□□□ 1.68
PPP1R3F-203ENST00000466508 XAGE2Q96GT9 111 aa25.55■■□□□ 1.68
PPP1R3F-203ENST00000466508 SNRKQ9NRH2 765 aa25.55■■□□□ 1.68
PPP1R3F-203ENST00000466508 NDUFB9Q9Y6M9 179 aa25.55■■□□□ 1.68
PPP1R3F-203ENST00000466508 HSPA4P34932 840 aa25.54■■□□□ 1.68
PPP1R3F-203ENST00000466508 ERFEQ4G0M1 354 aa25.54■■□□□ 1.68
PPP1R3F-203ENST00000466508 BICDL1Q6ZP65 573 aa25.54■■□□□ 1.68
PPP1R3F-203ENST00000466508 FAM227BQ96M60 508 aa25.54■■□□□ 1.68
PPP1R3F-203ENST00000466508 PALD1Q9ULE6 856 aa25.54■■□□□ 1.68
PPP1R3F-203ENST00000466508 MROH5Q6ZUA9 1318 aa25.54■■□□□ 1.68
PPP1R3F-203ENST00000466508 ARAP2Q8WZ64 1704 aa25.54■■□□□ 1.68
PPP1R3F-203ENST00000466508 ABCC12Q96J65 1359 aa25.54■■□□□ 1.68
PPP1R3F-203ENST00000466508 CCDC158Q5M9N0 1113 aa25.53■■□□□ 1.68
PPP1R3F-203ENST00000466508 TRAPPC3LQ5T215 181 aa25.53■■□□□ 1.68
PPP1R3F-203ENST00000466508 SETDB2Q96T68 719 aa25.53■■□□□ 1.68
PPP1R3F-203ENST00000466508 NYXQ9GZU5 481 aa25.53■■□□□ 1.68
PPP1R3F-203ENST00000466508 K7ELQ4 463 aaPredicted RBP25.53■■□□□ 1.68
PPP1R3F-203ENST00000466508 PDE8BO95263 885 aa25.53■■□□□ 1.68
PPP1R3F-203ENST00000466508 IFIT1P09914 478 aaKnown RBP25.53■■□□□ 1.68
PPP1R3F-203ENST00000466508 ADRA2BP18089 450 aa25.53■■□□□ 1.68
PPP1R3F-203ENST00000466508 ADORA1P30542 326 aa25.53■■□□□ 1.68
PPP1R3F-203ENST00000466508 GORABQ5T7V8 394 aa25.53■■□□□ 1.68
PPP1R3F-203ENST00000466508 TICAM2Q86XR7 235 aa25.53■■□□□ 1.68
PPP1R3F-203ENST00000466508 SLKQ9H2G2 1235 aaPredicted RBP25.53■■□□□ 1.68
PPP1R3F-203ENST00000466508 ANTXR1Q9H6X2 564 aa25.53■■□□□ 1.68
PPP1R3F-203ENST00000466508 SEC31BQ9NQW1 1179 aa25.53■■□□□ 1.68
PPP1R3F-203ENST00000466508 PAG1Q9NWQ8 432 aa25.53■■□□□ 1.68
PPP1R3F-203ENST00000466508 A0A0D9SFI3 127 aa25.52■■□□□ 1.68
PPP1R3F-203ENST00000466508 RFC4P35249 363 aa25.52■■□□□ 1.68
PPP1R3F-203ENST00000466508 KBTBD3Q8NAB2 608 aa25.52■■□□□ 1.68
PPP1R3F-203ENST00000466508 ST18O60284 1047 aa25.51■■□□□ 1.67
PPP1R3F-203ENST00000466508 DDX46Q7L014 1031 aaKnown RBP25.51■■□□□ 1.67
PPP1R3F-203ENST00000466508 MPHOSPH8Q99549 860 aa25.51■■□□□ 1.67
PPP1R3F-203ENST00000466508 MED23Q9ULK4 1368 aa25.51■■□□□ 1.67
PPP1R3F-203ENST00000466508 PHF14O94880 888 aa25.51■■□□□ 1.67
PPP1R3F-203ENST00000466508 SLC10A5Q5PT55 438 aa25.51■■□□□ 1.67
PPP1R3F-203ENST00000466508 TTC39AQ5SRH9 613 aa25.51■■□□□ 1.67
PPP1R3F-203ENST00000466508 GOLIM4O00461 696 aa25.5■■□□□ 1.67
PPP1R3F-203ENST00000466508 SF3B3Q15393 1217 aaKnown RBP25.5■■□□□ 1.67
PPP1R3F-203ENST00000466508 EZH2Q15910 746 aaKnown RBP25.5■■□□□ 1.67
PPP1R3F-203ENST00000466508 CAMKK2Q96RR4 588 aa25.5■■□□□ 1.67
PPP1R3F-203ENST00000466508 CCDC171Q6TFL3 1326 aa25.5■■□□□ 1.67
PPP1R3F-203ENST00000466508 GTF2E1P29083 439 aaPredicted RBP25.49■■□□□ 1.67
PPP1R3F-203ENST00000466508 IGHMBP2P38935 993 aaKnown RBP25.49■■□□□ 1.67
PPP1R3F-203ENST00000466508 AKAP11Q9UKA4 1901 aa25.49■■□□□ 1.67
PPP1R3F-203ENST00000466508 PUM3Q15397 648 aaKnown RBP25.49■■□□□ 1.67
PPP1R3F-203ENST00000466508 NBPF5PQ86XG9 351 aaPredicted RBP25.49■■□□□ 1.67
PPP1R3F-203ENST00000466508 CDC5LQ99459 802 aaKnown RBP25.49■■□□□ 1.67
PPP1R3F-203ENST00000466508 PTH1RQ03431 593 aa25.48■■□□□ 1.67
PPP1R3F-203ENST00000466508 SPRYD3Q8NCJ5 442 aa25.48■■□□□ 1.67
PPP1R3F-203ENST00000466508 TAF1P21675 1872 aa25.47■■□□□ 1.67
PPP1R3F-203ENST00000466508 A0A1B0GUL6 1792 aa25.47■■□□□ 1.67
PPP1R3F-203ENST00000466508 COL4A1P02462 1669 aa25.47■■□□□ 1.67
PPP1R3F-203ENST00000466508 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.47■■□□□ 1.67
PPP1R3F-203ENST00000466508 FGFR2P21802 821 aa25.47■■□□□ 1.67
PPP1R3F-203ENST00000466508 TPTE2Q6XPS3 522 aa25.47■■□□□ 1.67
PPP1R3F-203ENST00000466508 C3orf67Q6ZVT6 689 aa25.47■■□□□ 1.67
PPP1R3F-203ENST00000466508 LPIN2Q92539 896 aa25.47■■□□□ 1.67
PPP1R3F-203ENST00000466508 MYH7P12883 1935 aa25.46■■□□□ 1.67
PPP1R3F-203ENST00000466508 HMGB2P26583 209 aaKnown RBP25.46■■□□□ 1.67
PPP1R3F-203ENST00000466508 ZNF512BQ96KM6 892 aaPredicted RBP25.46■■□□□ 1.67
PPP1R3F-203ENST00000466508 IL27Q8NEV9 243 aa25.45■■□□□ 1.67
PPP1R3F-203ENST00000466508 CARMIL3Q8ND23 1372 aa25.45■■□□□ 1.66
PPP1R3F-203ENST00000466508 NEK4P51957 841 aa25.45■■□□□ 1.66
PPP1R3F-203ENST00000466508 ZNF589Q86UQ0 364 aaPredicted RBP25.45■■□□□ 1.66
PPP1R3F-203ENST00000466508 HELBQ8NG08 1087 aaPredicted RBP25.45■■□□□ 1.66
PPP1R3F-203ENST00000466508 MAP4K1Q92918 833 aa25.45■■□□□ 1.66
PPP1R3F-203ENST00000466508 SSFA2P28290 1259 aa25.44■■□□□ 1.66
PPP1R3F-203ENST00000466508 FKBP4Q02790 459 aaKnown RBP eCLIP25.44■■□□□ 1.66
PPP1R3F-203ENST00000466508 SNX14Q9Y5W7 946 aa25.44■■□□□ 1.66
PPP1R3F-203ENST00000466508 PLSCR1O15162 318 aa25.43■■□□□ 1.66
PPP1R3F-203ENST00000466508 SCARF1Q14162 830 aa25.43■■□□□ 1.66
PPP1R3F-203ENST00000466508 TXNRD1Q16881 649 aa25.43■■□□□ 1.66
PPP1R3F-203ENST00000466508 NLRP3Q96P20 1036 aa25.43■■□□□ 1.66
PPP1R3F-203ENST00000466508 HSP90AA1P07900 732 aaKnown RBP25.42■■□□□ 1.66
PPP1R3F-203ENST00000466508 SLC5A1P13866 664 aa25.42■■□□□ 1.66
PPP1R3F-203ENST00000466508 NECTIN1Q15223 517 aa25.42■■□□□ 1.66
PPP1R3F-203ENST00000466508 MCMDC2Q4G0Z9 681 aa25.42■■□□□ 1.66
PPP1R3F-203ENST00000466508 ANKRD18AQ8IVF6 992 aa25.42■■□□□ 1.66
PPP1R3F-203ENST00000466508 RASEFQ8IZ41 740 aa25.42■■□□□ 1.66
PPP1R3F-203ENST00000466508 PROM2Q8N271 834 aa25.42■■□□□ 1.66
PPP1R3F-203ENST00000466508 KCNB2Q92953 911 aa25.42■■□□□ 1.66
PPP1R3F-203ENST00000466508 RBM8AQ9Y5S9 174 aaKnown RBP25.42■■□□□ 1.66
PPP1R3F-203ENST00000466508 CHGBP05060 677 aa25.41■■□□□ 1.66
PPP1R3F-203ENST00000466508 NBR1Q14596 966 aa25.41■■□□□ 1.66
PPP1R3F-203ENST00000466508 NFIXQ14938 502 aa25.41■■□□□ 1.66
PPP1R3F-203ENST00000466508 TAF5LO75529 589 aa25.4■■□□□ 1.66
PPP1R3F-203ENST00000466508 MCAMP43121 646 aa25.4■■□□□ 1.66
PPP1R3F-203ENST00000466508 MCM2P49736 904 aa25.4■■□□□ 1.66
PPP1R3F-203ENST00000466508 LRRFIP1Q32MZ4 808 aaKnown RBP25.4■■□□□ 1.66
PPP1R3F-203ENST00000466508 CCDC102BQ68D86 513 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms