RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 DCPSQ96C86 337 aaKnown RBP14.19□□□□□ -0.14
CBX3-205ENST00000462165 PSME4Q14997 1843 aa14.19□□□□□ -0.14
CBX3-205ENST00000462165 RTL9Q8NET4 1388 aa14.19□□□□□ -0.14
CBX3-205ENST00000462165 C6orf229H3BNL8 230 aa14.18□□□□□ -0.14
CBX3-205ENST00000462165 GPSM2P81274 684 aa14.18□□□□□ -0.14
CBX3-205ENST00000462165 KRT24Q2M2I5 525 aa14.18□□□□□ -0.14
CBX3-205ENST00000462165 ANKRD13DQ6ZTN6 518 aa14.18□□□□□ -0.14
CBX3-205ENST00000462165 FAM89AQ96GI7 184 aa14.18□□□□□ -0.14
CBX3-205ENST00000462165 EYA3Q99504 573 aa14.18□□□□□ -0.14
CBX3-205ENST00000462165 KCNQ5Q9NR82 932 aa14.18□□□□□ -0.14
CBX3-205ENST00000462165 CHPF2Q9P2E5 772 aa14.18□□□□□ -0.14
CBX3-205ENST00000462165 ADM5C9JUS6 153 aa14.17□□□□□ -0.14
CBX3-205ENST00000462165 CHL1O00533 1208 aa14.17□□□□□ -0.14
CBX3-205ENST00000462165 KIF23Q02241 960 aaPredicted RBP14.17□□□□□ -0.14
CBX3-205ENST00000462165 RBM26Q5T8P6 1007 aaKnown RBP14.17□□□□□ -0.14
CBX3-205ENST00000462165 TBC1D16Q8TBP0 767 aa14.17□□□□□ -0.14
CBX3-205ENST00000462165 ZNF428Q96B54 188 aa14.17□□□□□ -0.14
CBX3-205ENST00000462165 PCDH10Q9P2E7 1040 aa14.17□□□□□ -0.14
CBX3-205ENST00000462165 VIL1P09327 827 aaKnown RBP14.16□□□□□ -0.14
CBX3-205ENST00000462165 HOXB7P09629 217 aa14.16□□□□□ -0.14
CBX3-205ENST00000462165 ZNF157P51786 506 aaPredicted RBP14.16□□□□□ -0.14
CBX3-205ENST00000462165 DOK7Q18PE1 504 aa14.16□□□□□ -0.14
CBX3-205ENST00000462165 KIF4BQ2VIQ3 1234 aa14.16□□□□□ -0.14
CBX3-205ENST00000462165 HDGFL1Q5TGJ6 251 aa14.16□□□□□ -0.14
CBX3-205ENST00000462165 PODXL2Q9NZ53 605 aa14.16□□□□□ -0.14
CBX3-205ENST00000462165 DBF4Q9UBU7 674 aaPredicted RBP14.16□□□□□ -0.14
CBX3-205ENST00000462165 ZNF609O15014 1411 aa14.15□□□□□ -0.14
CBX3-205ENST00000462165 PDE4DIPQ5VU43 2346 aa14.15□□□□□ -0.14
CBX3-205ENST00000462165 ATP5J2-PTCD1G3V325 749 aa14.15□□□□□ -0.14
CBX3-205ENST00000462165 SLC10A3P09131 477 aa14.15□□□□□ -0.14
CBX3-205ENST00000462165 RPS8P62241 208 aaKnown RBP14.15□□□□□ -0.14
CBX3-205ENST00000462165 TRIM28Q13263 835 aaKnown RBP14.15□□□□□ -0.14
CBX3-205ENST00000462165 SULF1Q8IWU6 871 aa14.15□□□□□ -0.14
CBX3-205ENST00000462165 RNF186Q9NXI6 227 aa14.15□□□□□ -0.14
CBX3-205ENST00000462165 IRS4O14654 1257 aaPredicted RBP14.14□□□□□ -0.15
CBX3-205ENST00000462165 TRPA1O75762 1119 aa14.14□□□□□ -0.15
CBX3-205ENST00000462165 CSRNP1Q96S65 589 aa14.14□□□□□ -0.15
CBX3-205ENST00000462165 ZC3H12CQ9C0D7 883 aaKnown RBP14.14□□□□□ -0.15
CBX3-205ENST00000462165 GGA3Q9NZ52 723 aa14.14□□□□□ -0.15
CBX3-205ENST00000462165 RALBP1Q15311 655 aa14.13□□□□□ -0.15
CBX3-205ENST00000462165 NEUROD2Q15784 382 aa14.13□□□□□ -0.15
CBX3-205ENST00000462165 RTL5Q5HYW3 569 aaPredicted RBP14.13□□□□□ -0.15
CBX3-205ENST00000462165 REM2Q8IYK8 340 aaPredicted RBP14.13□□□□□ -0.15
CBX3-205ENST00000462165 CDCA5Q96FF9 252 aa14.13□□□□□ -0.15
CBX3-205ENST00000462165 HYPKQ9NX55 129 aa14.13□□□□□ -0.15
CBX3-205ENST00000462165 TRIM35Q9UPQ4 493 aa14.13□□□□□ -0.15
CBX3-205ENST00000462165 LAS1LQ9Y4W2 734 aaKnown RBP14.13□□□□□ -0.15
CBX3-205ENST00000462165 PAPPA2Q9BXP8 1791 aa14.13□□□□□ -0.15
CBX3-205ENST00000462165 ASTN2O75129 1339 aaPredicted RBP14.13□□□□□ -0.15
CBX3-205ENST00000462165 ZNF280AP59817 542 aaPredicted RBP14.12□□□□□ -0.15
CBX3-205ENST00000462165 AGBL3Q8NEM8 1001 aa14.12□□□□□ -0.15
CBX3-205ENST00000462165 UFL1O94874 794 aa14.11□□□□□ -0.15
CBX3-205ENST00000462165 HSP90B1P14625 803 aaKnown RBP14.11□□□□□ -0.15
CBX3-205ENST00000462165 SOX10P56693 466 aa14.11□□□□□ -0.15
CBX3-205ENST00000462165 FKBP1BP68106 108 aa14.11□□□□□ -0.15
CBX3-205ENST00000462165 RSBN1LQ6PCB5 846 aaPredicted RBP14.11□□□□□ -0.15
CBX3-205ENST00000462165 RASAL3Q86YV0 1011 aa14.11□□□□□ -0.15
CBX3-205ENST00000462165 CCDC146Q8IYE0 955 aa14.11□□□□□ -0.15
CBX3-205ENST00000462165 ZBTB38Q8NAP3 1195 aaPredicted RBP14.11□□□□□ -0.15
CBX3-205ENST00000462165 SEC31BQ9NQW1 1179 aa14.11□□□□□ -0.15
CBX3-205ENST00000462165 GGA1Q9UJY5 639 aa14.11□□□□□ -0.15
CBX3-205ENST00000462165 PITPNM2Q9BZ72 1349 aa14.11□□□□□ -0.15
CBX3-205ENST00000462165 G3V3G9 751 aa14.1□□□□□ -0.15
CBX3-205ENST00000462165 SCARF1Q14162 830 aa14.1□□□□□ -0.15
CBX3-205ENST00000462165 DCAF8Q5TAQ9 597 aa14.1□□□□□ -0.15
CBX3-205ENST00000462165 ANGEL2Q5VTE6 544 aaKnown RBP14.1□□□□□ -0.15
CBX3-205ENST00000462165 CTU1Q7Z7A3 348 aaKnown RBP14.1□□□□□ -0.15
CBX3-205ENST00000462165 RUNDC1Q96C34 613 aa14.1□□□□□ -0.15
CBX3-205ENST00000462165 GMLQ99445 158 aa14.1□□□□□ -0.15
CBX3-205ENST00000462165 ANKIB1Q9P2G1 1089 aa14.1□□□□□ -0.15
CBX3-205ENST00000462165 ZNF646O15015 1829 aaPredicted RBP14.09□□□□□ -0.15
CBX3-205ENST00000462165 DUSP27Q5VZP5 1158 aa14.09□□□□□ -0.15
CBX3-205ENST00000462165 RIC3Q7Z5B4 369 aa14.09□□□□□ -0.15
CBX3-205ENST00000462165 MYH3P11055 1940 aa14.08□□□□□ -0.16
CBX3-205ENST00000462165 GOLGA2Q08379 1002 aa14.08□□□□□ -0.16
CBX3-205ENST00000462165 CCDC152Q4G0S7 254 aa14.08□□□□□ -0.16
CBX3-205ENST00000462165 PODNQ7Z5L7 613 aa14.08□□□□□ -0.16
CBX3-205ENST00000462165 CCDC191Q8NCU4 936 aa14.08□□□□□ -0.16
CBX3-205ENST00000462165 MYOZ2Q9NPC6 264 aa14.08□□□□□ -0.16
CBX3-205ENST00000462165 XDHP47989 1333 aa14.08□□□□□ -0.16
CBX3-205ENST00000462165 SPEF2Q9C093 1822 aa14.07□□□□□ -0.16
CBX3-205ENST00000462165 PDE8AO60658 829 aa14.07□□□□□ -0.16
CBX3-205ENST00000462165 ABCB7O75027 752 aa14.07□□□□□ -0.16
CBX3-205ENST00000462165 PCCAP05165 728 aaPredicted RBP14.07□□□□□ -0.16
CBX3-205ENST00000462165 USP17L8P0C7I0 530 aa14.07□□□□□ -0.16
CBX3-205ENST00000462165 POTEHQ6S545 545 aa14.07□□□□□ -0.16
CBX3-205ENST00000462165 MYD88Q99836 296 aa14.07□□□□□ -0.16
CBX3-205ENST00000462165 PHAXQ9H814 394 aaKnown RBP14.07□□□□□ -0.16
CBX3-205ENST00000462165 MBIPQ9NS73 344 aa14.07□□□□□ -0.16
CBX3-205ENST00000462165 USP17L3A6NCW0 530 aa14.06□□□□□ -0.16
CBX3-205ENST00000462165 USP17L4A6NCW7 530 aa14.06□□□□□ -0.16
CBX3-205ENST00000462165 ATP2B4P23634 1241 aa14.06□□□□□ -0.16
CBX3-205ENST00000462165 PKN2Q16513 984 aaKnown RBP14.06□□□□□ -0.16
CBX3-205ENST00000462165 USP17L1Q7RTZ2 530 aa14.06□□□□□ -0.16
CBX3-205ENST00000462165 HPS5Q9UPZ3 1129 aa14.06□□□□□ -0.16
CBX3-205ENST00000462165 MYBBP1AQ9BQG0 1328 aaKnown RBP14.06□□□□□ -0.16
CBX3-205ENST00000462165 ZNF853P0CG23 659 aa14.05□□□□□ -0.16
CBX3-205ENST00000462165 WDR43Q15061 677 aaKnown RBP eCLIP14.05□□□□□ -0.16
CBX3-205ENST00000462165 PRPF38BQ5VTL8 546 aaKnown RBP14.05□□□□□ -0.16
CBX3-205ENST00000462165 ANKRD18AQ8IVF6 992 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms