RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 OVOS2A0A0G2JMS6 1433 aa16.03■□□□□ 0.16
TOP3B-213ENST00000457179 STARD3NLO95772 234 aa16.03■□□□□ 0.16
TOP3B-213ENST00000457179 DRC7Q8IY82 874 aa16.03■□□□□ 0.16
TOP3B-213ENST00000457179 SRCAPQ6ZRS2 3230 aa16.03■□□□□ 0.16
TOP3B-213ENST00000457179 UBAP1LF5GYI3 381 aa16.02■□□□□ 0.16
TOP3B-213ENST00000457179 LRMPQ12912 555 aa16.02■□□□□ 0.16
TOP3B-213ENST00000457179 DDB1Q16531 1140 aa16.02■□□□□ 0.16
TOP3B-213ENST00000457179 FAM98CQ17RN3 349 aaKnown RBP16.02■□□□□ 0.16
TOP3B-213ENST00000457179 ADCK5Q3MIX3 580 aa16.02■□□□□ 0.16
TOP3B-213ENST00000457179 NGLY1Q96IV0 654 aa16.02■□□□□ 0.16
TOP3B-213ENST00000457179 JAKMIP1Q96N16 626 aaKnown RBP16.02■□□□□ 0.16
TOP3B-213ENST00000457179 SEC62Q99442 399 aaKnown RBP16.02■□□□□ 0.16
TOP3B-213ENST00000457179 TRIM34Q9BYJ4 488 aa16.02■□□□□ 0.16
TOP3B-213ENST00000457179 LSG1Q9H089 658 aaKnown RBP16.02■□□□□ 0.16
TOP3B-213ENST00000457179 ST7Q9NRC1 585 aa16.02■□□□□ 0.16
TOP3B-213ENST00000457179 DBNLQ9UJU6 430 aaKnown RBP16.02■□□□□ 0.16
TOP3B-213ENST00000457179 KIF1AQ12756 1690 aa16.02■□□□□ 0.16
TOP3B-213ENST00000457179 PPFIA3O75145 1194 aa16.02■□□□□ 0.15
TOP3B-213ENST00000457179 LARGE1O95461 756 aa16.02■□□□□ 0.15
TOP3B-213ENST00000457179 MCM2P49736 904 aa16.02■□□□□ 0.15
TOP3B-213ENST00000457179 FKBP4Q02790 459 aaKnown RBP eCLIP16.02■□□□□ 0.15
TOP3B-213ENST00000457179 KIF6Q6ZMV9 814 aa16.02■□□□□ 0.15
TOP3B-213ENST00000457179 CCDC129Q6ZRS4 1044 aa16.02■□□□□ 0.15
TOP3B-213ENST00000457179 RAD50Q92878 1312 aa16.02■□□□□ 0.15
TOP3B-213ENST00000457179 KCNQ2O43526 872 aa16.01■□□□□ 0.15
TOP3B-213ENST00000457179 ANAPC15P60006 121 aa16.01■□□□□ 0.15
TOP3B-213ENST00000457179 CCDC83Q8IWF9 413 aa16.01■□□□□ 0.15
TOP3B-213ENST00000457179 LRRC37A3O60309 1634 aa16.01■□□□□ 0.15
TOP3B-213ENST00000457179 GOLGA6L6A8MZA4 724 aa16.01■□□□□ 0.15
TOP3B-213ENST00000457179 TNNT1P13805 278 aa16.01■□□□□ 0.15
TOP3B-213ENST00000457179 COL9A3Q14050 684 aaPredicted RBP16.01■□□□□ 0.15
TOP3B-213ENST00000457179 NMIQ13287 307 aaPredicted RBP16■□□□□ 0.15
TOP3B-213ENST00000457179 MTX1Q13505 466 aa16■□□□□ 0.15
TOP3B-213ENST00000457179 CUL4AQ13619 759 aa16■□□□□ 0.15
TOP3B-213ENST00000457179 HSP90AB3PQ58FF7 597 aa16■□□□□ 0.15
TOP3B-213ENST00000457179 ALS2Q96Q42 1657 aa16■□□□□ 0.15
TOP3B-213ENST00000457179 NPHP1O15259 732 aa16■□□□□ 0.15
TOP3B-213ENST00000457179 CCDC57Q2TAC2 916 aa16■□□□□ 0.15
TOP3B-213ENST00000457179 KRT222Q8N1A0 295 aa16■□□□□ 0.15
TOP3B-213ENST00000457179 CCDC112Q8NEF3 446 aa16■□□□□ 0.15
TOP3B-213ENST00000457179 KIF18AQ8NI77 898 aa16■□□□□ 0.15
TOP3B-213ENST00000457179 GOLIM4O00461 696 aa16■□□□□ 0.15
TOP3B-213ENST00000457179 BICDL1Q6ZP65 573 aa16■□□□□ 0.15
TOP3B-213ENST00000457179 NECAB1Q8N987 351 aa16■□□□□ 0.15
TOP3B-213ENST00000457179 HELBQ8NG08 1087 aaPredicted RBP16■□□□□ 0.15
TOP3B-213ENST00000457179 SLC4A9Q96Q91 983 aa16■□□□□ 0.15
TOP3B-213ENST00000457179 TCHHQ07283 1943 aa15.99■□□□□ 0.15
TOP3B-213ENST00000457179 ZBTB9Q96C00 473 aa15.99■□□□□ 0.15
TOP3B-213ENST00000457179 TRMT112Q9UI30 125 aaKnown RBP15.99■□□□□ 0.15
TOP3B-213ENST00000457179 UTRNP46939 3433 aa15.99■□□□□ 0.15
TOP3B-213ENST00000457179 A0A0D9SFI3 127 aa15.99■□□□□ 0.15
TOP3B-213ENST00000457179 SNAP23O00161 211 aa15.99■□□□□ 0.15
TOP3B-213ENST00000457179 RUFY3Q7L099 469 aa15.99■□□□□ 0.15
TOP3B-213ENST00000457179 CAPN2P17655 700 aa15.98■□□□□ 0.15
TOP3B-213ENST00000457179 ATP6V1AP38606 617 aa15.98■□□□□ 0.15
TOP3B-213ENST00000457179 TNNI3KQ59H18 835 aa15.98■□□□□ 0.15
TOP3B-213ENST00000457179 FPGT-TNNI3KV9GXZ4 949 aa15.98■□□□□ 0.15
TOP3B-213ENST00000457179 CCDC186Q7Z3E2 898 aa15.98■□□□□ 0.15
TOP3B-213ENST00000457179 AOX1Q06278 1338 aa15.98■□□□□ 0.15
TOP3B-213ENST00000457179 SMC3Q9UQE7 1217 aa15.98■□□□□ 0.15
TOP3B-213ENST00000457179 SMTNL1A8MU46 457 aa15.97■□□□□ 0.15
TOP3B-213ENST00000457179 MORC2Q9Y6X9 1032 aaPredicted RBP15.97■□□□□ 0.15
TOP3B-213ENST00000457179 WDR33Q9C0J8 1336 aaKnown RBP15.97■□□□□ 0.15
TOP3B-213ENST00000457179 PXDNLA1KZ92 1463 aa15.97■□□□□ 0.15
TOP3B-213ENST00000457179 STRCQ7RTU9 1775 aa15.97■□□□□ 0.15
TOP3B-213ENST00000457179 VPS37CA5D8V6 355 aaPredicted RBP15.97■□□□□ 0.15
TOP3B-213ENST00000457179 TPD52L1Q16890 204 aaPredicted RBP15.97■□□□□ 0.15
TOP3B-213ENST00000457179 ZNF589Q86UQ0 364 aaPredicted RBP15.97■□□□□ 0.15
TOP3B-213ENST00000457179 CCDC24Q8N4L8 307 aa15.97■□□□□ 0.15
TOP3B-213ENST00000457179 EVI5LQ96CN4 794 aa15.97■□□□□ 0.15
TOP3B-213ENST00000457179 STK3Q13188 491 aa15.96■□□□□ 0.15
TOP3B-213ENST00000457179 PI16Q6UXB8 463 aa15.96■□□□□ 0.15
TOP3B-213ENST00000457179 RUFY2Q8WXA3 655 aa15.96■□□□□ 0.15
TOP3B-213ENST00000457179 NRBP1Q9UHY1 535 aa15.96■□□□□ 0.15
TOP3B-213ENST00000457179 TAF6LQ9Y6J9 622 aa15.96■□□□□ 0.15
TOP3B-213ENST00000457179 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.96■□□□□ 0.15
TOP3B-213ENST00000457179 ZFP91Q96JP5 570 aaPredicted RBP15.96■□□□□ 0.15
TOP3B-213ENST00000457179 PDRG1Q9NUG6 133 aa15.96■□□□□ 0.15
TOP3B-213ENST00000457179 TTC41PQ6P2S7 1318 aa15.96■□□□□ 0.14
TOP3B-213ENST00000457179 DZIP3Q86Y13 1208 aaKnown RBP15.96■□□□□ 0.14
TOP3B-213ENST00000457179 INTS4Q96HW7 963 aaKnown RBP15.96■□□□□ 0.14
TOP3B-213ENST00000457179 LRRC2Q9BYS8 371 aa15.96■□□□□ 0.14
TOP3B-213ENST00000457179 CALCOCO1Q9P1Z2 691 aa15.96■□□□□ 0.14
TOP3B-213ENST00000457179 TPM3P06753 285 aa15.95■□□□□ 0.14
TOP3B-213ENST00000457179 FOXO4P98177 505 aa15.95■□□□□ 0.14
TOP3B-213ENST00000457179 KMT5BQ4FZB7 885 aa15.95■□□□□ 0.14
TOP3B-213ENST00000457179 PTF1AQ7RTS3 328 aa15.95■□□□□ 0.14
TOP3B-213ENST00000457179 FERMT3Q86UX7 667 aa15.95■□□□□ 0.14
TOP3B-213ENST00000457179 LIMCH1Q9UPQ0 1083 aa15.95■□□□□ 0.14
TOP3B-213ENST00000457179 RBM8AQ9Y5S9 174 aaKnown RBP15.95■□□□□ 0.14
TOP3B-213ENST00000457179 LMO7Q8WWI1 1683 aa15.95■□□□□ 0.14
TOP3B-213ENST00000457179 SYT1P21579 422 aa15.95■□□□□ 0.14
TOP3B-213ENST00000457179 TCIRG1Q13488 830 aa15.95■□□□□ 0.14
TOP3B-213ENST00000457179 CNNM1Q9NRU3 951 aa15.94■□□□□ 0.14
TOP3B-213ENST00000457179 CEP126Q9P2H0 1117 aa15.94■□□□□ 0.14
TOP3B-213ENST00000457179 A0A1B0GUL7 405 aa15.94■□□□□ 0.14
TOP3B-213ENST00000457179 RFX5P48382 616 aaPredicted RBP15.94■□□□□ 0.14
TOP3B-213ENST00000457179 NKX1-1Q15270 411 aaPredicted RBP15.94■□□□□ 0.14
TOP3B-213ENST00000457179 LDHAL6AQ6ZMR3 332 aa15.94■□□□□ 0.14
TOP3B-213ENST00000457179 LUZP1Q86V48 1076 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms