RNA–Protein interactions for RNA: ENST00000440731.4

PGBD4P3-201, Transcript of piggyBac transposable element derived 4 pseudogene 3, humanhuman

BASIC

Gene PGBD4P3, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P3-201ENST00000440731 CYP2E1P05181 493 aaPredicted RBP6.69□□□□□ -1.34
PGBD4P3-201ENST00000440731 HOXB4P17483 251 aaPredicted RBP6.69□□□□□ -1.34
PGBD4P3-201ENST00000440731 SIK1P57059 783 aa6.69□□□□□ -1.34
PGBD4P3-201ENST00000440731 LINC00114Q6XXX2 140 aa6.69□□□□□ -1.34
PGBD4P3-201ENST00000440731 TRPM4Q8TD43 1214 aa6.69□□□□□ -1.34
PGBD4P3-201ENST00000440731 MDFIQ99750 246 aa6.69□□□□□ -1.34
PGBD4P3-201ENST00000440731 TRAIPQ9BWF2 469 aa6.69□□□□□ -1.34
PGBD4P3-201ENST00000440731 SUV39H2Q9H5I1 410 aa6.69□□□□□ -1.34
PGBD4P3-201ENST00000440731 KANSL3Q9P2N6 904 aa6.69□□□□□ -1.34
PGBD4P3-201ENST00000440731 NAGPAQ9UK23 515 aa6.69□□□□□ -1.34
PGBD4P3-201ENST00000440731 IVNS1ABPQ9Y6Y0 642 aa6.69□□□□□ -1.34
PGBD4P3-201ENST00000440731 K7ELQ4 463 aaPredicted RBP6.68□□□□□ -1.34
PGBD4P3-201ENST00000440731 GNB5O14775 395 aa6.68□□□□□ -1.34
PGBD4P3-201ENST00000440731 NRLP54845 237 aa6.68□□□□□ -1.34
PGBD4P3-201ENST00000440731 GPLD1P80108 840 aa6.68□□□□□ -1.34
PGBD4P3-201ENST00000440731 PERM1Q5SV97 790 aa6.68□□□□□ -1.34
PGBD4P3-201ENST00000440731 PDE12Q6L8Q7 609 aaKnown RBP6.68□□□□□ -1.34
PGBD4P3-201ENST00000440731 NCAPG2Q86XI2 1143 aa6.68□□□□□ -1.34
PGBD4P3-201ENST00000440731 C1orf127Q8N9H9 656 aa6.68□□□□□ -1.34
PGBD4P3-201ENST00000440731 SPACA7Q96KW9 195 aa6.68□□□□□ -1.34
PGBD4P3-201ENST00000440731 PLVAPQ9BX97 442 aa6.68□□□□□ -1.34
PGBD4P3-201ENST00000440731 SMG9Q9H0W8 520 aaKnown RBP6.68□□□□□ -1.34
PGBD4P3-201ENST00000440731 RBSNQ9H1K0 784 aa6.68□□□□□ -1.34
PGBD4P3-201ENST00000440731 CNTN3Q9P232 1028 aa6.68□□□□□ -1.34
PGBD4P3-201ENST00000440731 SOWAHDA6NJG2 315 aa6.67□□□□□ -1.34
PGBD4P3-201ENST00000440731 PIK3R2O00459 728 aa6.67□□□□□ -1.34
PGBD4P3-201ENST00000440731 PROCP04070 461 aa6.67□□□□□ -1.34
PGBD4P3-201ENST00000440731 ITGB2P05107 769 aa6.67□□□□□ -1.34
PGBD4P3-201ENST00000440731 USP5P45974 858 aa6.67□□□□□ -1.34
PGBD4P3-201ENST00000440731 TRAPPC3LQ5T215 181 aa6.67□□□□□ -1.34
PGBD4P3-201ENST00000440731 GDF6Q6KF10 455 aaPredicted RBP6.67□□□□□ -1.34
PGBD4P3-201ENST00000440731 OR13H1Q8NG92 308 aa6.67□□□□□ -1.34
PGBD4P3-201ENST00000440731 DCAF5Q96JK2 942 aa6.67□□□□□ -1.34
PGBD4P3-201ENST00000440731 NDUFB5O43674 189 aa6.66□□□□□ -1.34
PGBD4P3-201ENST00000440731 CES1P23141 567 aa6.66□□□□□ -1.34
PGBD4P3-201ENST00000440731 ARHGAP4P98171 946 aa6.66□□□□□ -1.34
PGBD4P3-201ENST00000440731 HYAL2Q12891 473 aa6.66□□□□□ -1.34
PGBD4P3-201ENST00000440731 ECM1Q16610 540 aa6.66□□□□□ -1.34
PGBD4P3-201ENST00000440731 COL13A1Q5TAT6 717 aaPredicted RBP6.66□□□□□ -1.34
PGBD4P3-201ENST00000440731 C20orf204Q6ZNR8 217 aa6.66□□□□□ -1.34
PGBD4P3-201ENST00000440731 TRIM11Q96F44 468 aa6.66□□□□□ -1.34
PGBD4P3-201ENST00000440731 LPIN3Q9BQK8 851 aa6.66□□□□□ -1.34
PGBD4P3-201ENST00000440731 FOXD3Q9UJU5 478 aaPredicted RBP6.66□□□□□ -1.34
PGBD4P3-201ENST00000440731 FAM229AH3BQW9 127 aa6.65□□□□□ -1.34
PGBD4P3-201ENST00000440731 PHACTR2O75167 634 aa6.65□□□□□ -1.34
PGBD4P3-201ENST00000440731 AFF1P51825 1210 aaKnown RBP6.65□□□□□ -1.34
PGBD4P3-201ENST00000440731 EHHADHQ08426 723 aa6.65□□□□□ -1.34
PGBD4P3-201ENST00000440731 KCNA1Q09470 495 aa6.65□□□□□ -1.34
PGBD4P3-201ENST00000440731 DMRTC2Q8IXT2 367 aaPredicted RBP6.65□□□□□ -1.34
PGBD4P3-201ENST00000440731 PLD4Q96BZ4 506 aa6.65□□□□□ -1.34
PGBD4P3-201ENST00000440731 GNEQ9Y223 722 aaKnown RBP6.65□□□□□ -1.34
PGBD4P3-201ENST00000440731 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.65□□□□□ -1.34
PGBD4P3-201ENST00000440731 TNFRSF21O75509 655 aa6.64□□□□□ -1.35
PGBD4P3-201ENST00000440731 COL8A1P27658 744 aa6.64□□□□□ -1.35
PGBD4P3-201ENST00000440731 SOX18P35713 384 aa6.64□□□□□ -1.35
PGBD4P3-201ENST00000440731 ATP11AP98196 1134 aa6.64□□□□□ -1.35
PGBD4P3-201ENST00000440731 CEP135Q66GS9 1140 aa6.64□□□□□ -1.35
PGBD4P3-201ENST00000440731 XKR5Q6UX68 686 aa6.64□□□□□ -1.35
PGBD4P3-201ENST00000440731 NOP53Q9NZM5 478 aaKnown RBP6.64□□□□□ -1.35
PGBD4P3-201ENST00000440731 TRPA1O75762 1119 aa6.63□□□□□ -1.35
PGBD4P3-201ENST00000440731 POLR3DP05423 398 aaPredicted RBP6.63□□□□□ -1.35
PGBD4P3-201ENST00000440731 MAPK1P28482 360 aa6.63□□□□□ -1.35
PGBD4P3-201ENST00000440731 CDC25BP30305 580 aa6.63□□□□□ -1.35
PGBD4P3-201ENST00000440731 TRIM28Q13263 835 aaKnown RBP6.63□□□□□ -1.35
PGBD4P3-201ENST00000440731 LCE3BQ5TA77 95 aa6.63□□□□□ -1.35
PGBD4P3-201ENST00000440731 GJD3Q8N144 294 aa6.63□□□□□ -1.35
PGBD4P3-201ENST00000440731 LACRTQ9GZZ8 138 aa6.63□□□□□ -1.35
PGBD4P3-201ENST00000440731 SPDYE3A6NKU9 549 aa6.62□□□□□ -1.35
PGBD4P3-201ENST00000440731 EREGO14944 169 aa6.62□□□□□ -1.35
PGBD4P3-201ENST00000440731 NID1P14543 1247 aa6.62□□□□□ -1.35
PGBD4P3-201ENST00000440731 ACPPP15309 386 aa6.62□□□□□ -1.35
PGBD4P3-201ENST00000440731 PRRT3Q5FWE3 981 aa6.62□□□□□ -1.35
PGBD4P3-201ENST00000440731 WFDC8Q8IUA0 241 aa6.62□□□□□ -1.35
PGBD4P3-201ENST00000440731 NIF3L1Q9GZT8 377 aa6.62□□□□□ -1.35
PGBD4P3-201ENST00000440731 RASSF4Q9H2L5 321 aa6.62□□□□□ -1.35
PGBD4P3-201ENST00000440731 FRRS1LQ9P0K9 344 aa6.62□□□□□ -1.35
PGBD4P3-201ENST00000440731 TRIM33Q9UPN9 1127 aa6.62□□□□□ -1.35
PGBD4P3-201ENST00000440731 SMNDC1O75940 238 aaKnown RBP eCLIP6.61□□□□□ -1.35
PGBD4P3-201ENST00000440731 PDE3BQ13370 1112 aa6.61□□□□□ -1.35
PGBD4P3-201ENST00000440731 COL9A3Q14050 684 aaPredicted RBP6.61□□□□□ -1.35
PGBD4P3-201ENST00000440731 MSL1Q68DK7 614 aa6.61□□□□□ -1.35
PGBD4P3-201ENST00000440731 IL22RA1Q8N6P7 574 aa6.61□□□□□ -1.35
PGBD4P3-201ENST00000440731 SNX29Q8TEQ0 813 aa6.61□□□□□ -1.35
PGBD4P3-201ENST00000440731 PMEPA1Q969W9 287 aa6.61□□□□□ -1.35
PGBD4P3-201ENST00000440731 PRDM6Q9NQX0 595 aa6.61□□□□□ -1.35
PGBD4P3-201ENST00000440731 GRIK4Q16099 956 aa6.6□□□□□ -1.35
PGBD4P3-201ENST00000440731 GRIK5Q16478 980 aa6.6□□□□□ -1.35
PGBD4P3-201ENST00000440731 CEP120Q8N960 986 aa6.6□□□□□ -1.35
PGBD4P3-201ENST00000440731 CHRDQ9H2X0 955 aa6.6□□□□□ -1.35
PGBD4P3-201ENST00000440731 SALL4Q9UJQ4 1053 aa6.6□□□□□ -1.35
PGBD4P3-201ENST00000440731 A0A0A0MRY4 1105 aa6.59□□□□□ -1.35
PGBD4P3-201ENST00000440731 KRBA1A5PL33 1030 aa6.59□□□□□ -1.35
PGBD4P3-201ENST00000440731 FAM177BA6PVY3 158 aa6.59□□□□□ -1.35
PGBD4P3-201ENST00000440731 PATL2C9JE40 543 aaKnown RBP6.59□□□□□ -1.35
PGBD4P3-201ENST00000440731 HOXD8P13378 290 aaPredicted RBP6.59□□□□□ -1.35
PGBD4P3-201ENST00000440731 ORC1Q13415 861 aa6.59□□□□□ -1.35
PGBD4P3-201ENST00000440731 TXNDC11Q6PKC3 985 aa6.59□□□□□ -1.35
PGBD4P3-201ENST00000440731 PBX4Q9BYU1 374 aa6.59□□□□□ -1.35
PGBD4P3-201ENST00000440731 ZFYVE28Q9HCC9 887 aa6.59□□□□□ -1.35
PGBD4P3-201ENST00000440731 AMOTL2Q9Y2J4 779 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms