RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 SHTN1A0MZ66 631 aa26.38■■□□□ 1.81
VIL1-204ENST00000440053 TNIP1Q15025 636 aa26.38■■□□□ 1.81
VIL1-204ENST00000440053 CNTROBQ8N137 903 aa26.38■■□□□ 1.81
VIL1-204ENST00000440053 CDC5LQ99459 802 aaKnown RBP26.38■■□□□ 1.81
VIL1-204ENST00000440053 EYA3Q99504 573 aa26.38■■□□□ 1.81
VIL1-204ENST00000440053 PLA2G12BQ9BX93 195 aa26.38■■□□□ 1.81
VIL1-204ENST00000440053 GGA1Q9UJY5 639 aa26.38■■□□□ 1.81
VIL1-204ENST00000440053 PASKQ96RG2 1323 aa26.38■■□□□ 1.81
VIL1-204ENST00000440053 SLC4A10Q6U841 1118 aa26.37■■□□□ 1.81
VIL1-204ENST00000440053 MRPL50Q8N5N7 158 aaKnown RBP26.37■■□□□ 1.81
VIL1-204ENST00000440053 ZC3H12CQ9C0D7 883 aaKnown RBP26.37■■□□□ 1.81
VIL1-204ENST00000440053 MINPP1Q9UNW1 487 aa26.37■■□□□ 1.81
VIL1-204ENST00000440053 PSMD14O00487 310 aa26.36■■□□□ 1.81
VIL1-204ENST00000440053 ECE2O60344 883 aa26.36■■□□□ 1.81
VIL1-204ENST00000440053 CSF1RP07333 972 aa26.36■■□□□ 1.81
VIL1-204ENST00000440053 BCL2L13Q9BXK5 485 aa26.36■■□□□ 1.81
VIL1-204ENST00000440053 ITGA6P23229 1130 aa26.36■■□□□ 1.81
VIL1-204ENST00000440053 FMR1Q06787 632 aaKnown RBP eCLIP26.36■■□□□ 1.81
VIL1-204ENST00000440053 FAM161AQ3B820 660 aa26.36■■□□□ 1.81
VIL1-204ENST00000440053 BSDC1Q9NW68 430 aaPredicted RBP26.36■■□□□ 1.81
VIL1-204ENST00000440053 ADAMTSL1Q8N6G6 1762 aa26.35■■□□□ 1.81
VIL1-204ENST00000440053 CACNA1FO60840 1977 aa26.35■■□□□ 1.81
VIL1-204ENST00000440053 FOXO4P98177 505 aa26.35■■□□□ 1.81
VIL1-204ENST00000440053 USP50Q70EL3 339 aaPredicted RBP26.34■■□□□ 1.81
VIL1-204ENST00000440053 SSH1Q8WYL5 1049 aa26.34■■□□□ 1.81
VIL1-204ENST00000440053 ADARB2Q9NS39 739 aaKnown RBP26.34■■□□□ 1.81
VIL1-204ENST00000440053 CNOT7Q9UIV1 285 aaKnown RBP26.34■■□□□ 1.81
VIL1-204ENST00000440053 XDHP47989 1333 aa26.33■■□□□ 1.81
VIL1-204ENST00000440053 RTL9Q8NET4 1388 aa26.33■■□□□ 1.81
VIL1-204ENST00000440053 EPHA10Q5JZY3 1008 aa26.33■■□□□ 1.81
VIL1-204ENST00000440053 HIRAP54198 1017 aaPredicted RBP26.32■■□□□ 1.8
VIL1-204ENST00000440053 TRMT2AQ8IZ69 625 aaKnown RBP26.32■■□□□ 1.8
VIL1-204ENST00000440053 CREBZFQ9NS37 354 aa26.32■■□□□ 1.8
VIL1-204ENST00000440053 G3V3G9 751 aa26.31■■□□□ 1.8
VIL1-204ENST00000440053 ATP2B4P23634 1241 aa26.31■■□□□ 1.8
VIL1-204ENST00000440053 DCAF8Q5TAQ9 597 aa26.31■■□□□ 1.8
VIL1-204ENST00000440053 MIER1Q8N108 512 aa26.31■■□□□ 1.8
VIL1-204ENST00000440053 IGHMBP2P38935 993 aaKnown RBP26.3■■□□□ 1.8
VIL1-204ENST00000440053 TRPM4Q8TD43 1214 aa26.3■■□□□ 1.8
VIL1-204ENST00000440053 SRCIN1Q9C0H9 1055 aa26.3■■□□□ 1.8
VIL1-204ENST00000440053 MKRN1Q9UHC7 482 aaKnown RBP26.3■■□□□ 1.8
VIL1-204ENST00000440053 GRM8O00222 908 aa26.3■■□□□ 1.8
VIL1-204ENST00000440053 MICALL2Q8IY33 904 aa26.3■■□□□ 1.8
VIL1-204ENST00000440053 JMYQ8N9B5 988 aa26.3■■□□□ 1.8
VIL1-204ENST00000440053 C9orf78Q9NZ63 289 aaPredicted RBP26.3■■□□□ 1.8
VIL1-204ENST00000440053 CHMP3Q9Y3E7 222 aa26.3■■□□□ 1.8
VIL1-204ENST00000440053 CCT4P50991 539 aaKnown RBP26.29■■□□□ 1.8
VIL1-204ENST00000440053 LMBR1LQ6UX01 489 aa26.29■■□□□ 1.8
VIL1-204ENST00000440053 MYH3P11055 1940 aa26.28■■□□□ 1.8
VIL1-204ENST00000440053 PCNTO95613 3336 aa26.28■■□□□ 1.8
VIL1-204ENST00000440053 TRAF5O00463 557 aa26.28■■□□□ 1.8
VIL1-204ENST00000440053 ALDH1L1O75891 902 aa26.28■■□□□ 1.8
VIL1-204ENST00000440053 DIEXFQ68CQ4 756 aaKnown RBP26.28■■□□□ 1.8
VIL1-204ENST00000440053 SAMD7Q7Z3H4 446 aa26.28■■□□□ 1.8
VIL1-204ENST00000440053 MPHOSPH8Q99549 860 aa26.28■■□□□ 1.8
VIL1-204ENST00000440053 ANKRD18BA2A2Z9 1011 aa26.27■■□□□ 1.8
VIL1-204ENST00000440053 TMEM88BA6NKF7 163 aa26.27■■□□□ 1.8
VIL1-204ENST00000440053 TXNRD3Q86VQ6 643 aa26.27■■□□□ 1.8
VIL1-204ENST00000440053 H7C1D1 291 aa26.26■■□□□ 1.79
VIL1-204ENST00000440053 EGFRP00533 1210 aa26.26■■□□□ 1.79
VIL1-204ENST00000440053 VIL1P09327 827 aaKnown RBP26.26■■□□□ 1.79
VIL1-204ENST00000440053 DPF2Q92785 391 aa26.26■■□□□ 1.79
VIL1-204ENST00000440053 ZNF594Q96JF6 807 aaPredicted RBP26.26■■□□□ 1.79
VIL1-204ENST00000440053 SPEF2Q9C093 1822 aa26.26■■□□□ 1.79
VIL1-204ENST00000440053 SNAP23O00161 211 aa26.25■■□□□ 1.79
VIL1-204ENST00000440053 NBPF7P0C2Y1 421 aaPredicted RBP26.25■■□□□ 1.79
VIL1-204ENST00000440053 RBM26Q5T8P6 1007 aaKnown RBP26.25■■□□□ 1.79
VIL1-204ENST00000440053 SUCLG2Q96I99 432 aa26.25■■□□□ 1.79
VIL1-204ENST00000440053 KLRK1P26718 216 aa26.24■■□□□ 1.79
VIL1-204ENST00000440053 CHRNDQ07001 517 aa26.24■■□□□ 1.79
VIL1-204ENST00000440053 IFIT5Q13325 482 aaKnown RBP26.24■■□□□ 1.79
VIL1-204ENST00000440053 TBC1D10BQ4KMP7 808 aaPredicted RBP26.24■■□□□ 1.79
VIL1-204ENST00000440053 HELBQ8NG08 1087 aaPredicted RBP26.24■■□□□ 1.79
VIL1-204ENST00000440053 KAZALD1Q96I82 304 aa26.24■■□□□ 1.79
VIL1-204ENST00000440053 PGAP2Q9UHJ9 254 aa26.23■■□□□ 1.79
VIL1-204ENST00000440053 TAF5LO75529 589 aa26.23■■□□□ 1.79
VIL1-204ENST00000440053 DLK2Q6UY11 383 aa26.23■■□□□ 1.79
VIL1-204ENST00000440053 GLIS2Q9BZE0 524 aaPredicted RBP26.23■■□□□ 1.79
VIL1-204ENST00000440053 SCN9AQ15858 1988 aa26.22■■□□□ 1.79
VIL1-204ENST00000440053 ZNF804BA4D1E1 1349 aa26.22■■□□□ 1.79
VIL1-204ENST00000440053 CST9Q5W186 159 aa26.22■■□□□ 1.79
VIL1-204ENST00000440053 ANKRD2Q9GZV1 360 aa26.22■■□□□ 1.79
VIL1-204ENST00000440053 SMC4Q9NTJ3 1288 aa26.22■■□□□ 1.79
VIL1-204ENST00000440053 LEMD3Q9Y2U8 911 aa26.22■■□□□ 1.79
VIL1-204ENST00000440053 PTPRCP08575 1304 aa26.21■■□□□ 1.79
VIL1-204ENST00000440053 RPS12P25398 132 aaKnown RBP26.21■■□□□ 1.79
VIL1-204ENST00000440053 ALDH1L2Q3SY69 923 aa26.21■■□□□ 1.79
VIL1-204ENST00000440053 MXD3Q9BW11 206 aa26.21■■□□□ 1.79
VIL1-204ENST00000440053 MED23Q9ULK4 1368 aa26.2■■□□□ 1.79
VIL1-204ENST00000440053 CCDC57Q2TAC2 916 aa26.2■■□□□ 1.78
VIL1-204ENST00000440053 RSBN1LQ6PCB5 846 aaPredicted RBP26.2■■□□□ 1.78
VIL1-204ENST00000440053 PODNQ7Z5L7 613 aa26.2■■□□□ 1.78
VIL1-204ENST00000440053 CNTNAP1P78357 1384 aa26.19■■□□□ 1.78
VIL1-204ENST00000440053 USP17L3A6NCW0 530 aa26.18■■□□□ 1.78
VIL1-204ENST00000440053 USP17L4A6NCW7 530 aa26.18■■□□□ 1.78
VIL1-204ENST00000440053 PLIN1O60240 522 aa26.18■■□□□ 1.78
VIL1-204ENST00000440053 USP17L1Q7RTZ2 530 aa26.18■■□□□ 1.78
VIL1-204ENST00000440053 ZC3H15Q8WU90 426 aaKnown RBP26.18■■□□□ 1.78
VIL1-204ENST00000440053 UTYO14607 1347 aa26.18■■□□□ 1.78
VIL1-204ENST00000440053 VEGFBP49765 207 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 557 ms