RNA–Protein interactions for RNA: ENST00000439259.1

AC012494.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012494.1, Length 1,103 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012494.1-201ENST00000439259 SMC1BQ8NDV3 1235 aa10.6□□□□□ -0.71
AC012494.1-201ENST00000439259 XAGE3Q8WTP9 111 aa10.6□□□□□ -0.71
AC012494.1-201ENST00000439259 BABAM1Q9NWV8 329 aa10.6□□□□□ -0.71
AC012494.1-201ENST00000439259 PCNTO95613 3336 aa10.6□□□□□ -0.71
AC012494.1-201ENST00000439259 ALDH1B1P30837 517 aa10.59□□□□□ -0.71
AC012494.1-201ENST00000439259 FKBP4Q02790 459 aaKnown RBP eCLIP10.59□□□□□ -0.71
AC012494.1-201ENST00000439259 CCDC184Q52MB2 194 aa10.59□□□□□ -0.71
AC012494.1-201ENST00000439259 SYNE4Q8N205 404 aa10.59□□□□□ -0.71
AC012494.1-201ENST00000439259 RPGRQ92834 1020 aaKnown RBP10.59□□□□□ -0.71
AC012494.1-201ENST00000439259 CHPF2Q9P2E5 772 aa10.59□□□□□ -0.71
AC012494.1-201ENST00000439259 ARFGEF2Q9Y6D5 1785 aa10.59□□□□□ -0.71
AC012494.1-201ENST00000439259 ZNF541Q9H0D2 1346 aa10.58□□□□□ -0.71
AC012494.1-201ENST00000439259 APAF1O14727 1248 aa10.58□□□□□ -0.72
AC012494.1-201ENST00000439259 ZDHHC16Q969W1 377 aa10.58□□□□□ -0.72
AC012494.1-201ENST00000439259 DICER1Q9UPY3 1922 aaKnown RBP10.57□□□□□ -0.72
AC012494.1-201ENST00000439259 HCLS1P14317 486 aaPredicted RBP10.57□□□□□ -0.72
AC012494.1-201ENST00000439259 IARSP41252 1262 aaKnown RBP10.57□□□□□ -0.72
AC012494.1-201ENST00000439259 PARP10Q53GL7 1025 aa10.57□□□□□ -0.72
AC012494.1-201ENST00000439259 HDGFL1Q5TGJ6 251 aa10.57□□□□□ -0.72
AC012494.1-201ENST00000439259 PPP1R42Q7Z4L9 355 aa10.57□□□□□ -0.72
AC012494.1-201ENST00000439259 RTKN2Q8IZC4 609 aa10.57□□□□□ -0.72
AC012494.1-201ENST00000439259 UTP14AQ9BVJ6 771 aaKnown RBP10.57□□□□□ -0.72
AC012494.1-201ENST00000439259 DDX21Q9NR30 783 aaKnown RBP eCLIP10.57□□□□□ -0.72
AC012494.1-201ENST00000439259 MBIPQ9NS73 344 aa10.57□□□□□ -0.72
AC012494.1-201ENST00000439259 VPS9D1Q9Y2B5 631 aa10.57□□□□□ -0.72
AC012494.1-201ENST00000439259 WDR90Q96KV7 1748 aa10.57□□□□□ -0.72
AC012494.1-201ENST00000439259 SNED1Q8TER0 1413 aa10.57□□□□□ -0.72
AC012494.1-201ENST00000439259 IBTKQ9P2D0 1353 aaPredicted RBP10.56□□□□□ -0.72
AC012494.1-201ENST00000439259 ELL2O00472 640 aaPredicted RBP10.56□□□□□ -0.72
AC012494.1-201ENST00000439259 HOXA10P31260 410 aaPredicted RBP10.56□□□□□ -0.72
AC012494.1-201ENST00000439259 DUSP27Q5VZP5 1158 aa10.56□□□□□ -0.72
AC012494.1-201ENST00000439259 NLRP10Q86W26 655 aa10.56□□□□□ -0.72
AC012494.1-201ENST00000439259 KLRG1Q96E93 195 aa10.56□□□□□ -0.72
AC012494.1-201ENST00000439259 RBM17Q96I25 401 aaKnown RBP10.56□□□□□ -0.72
AC012494.1-201ENST00000439259 CFAP44Q96MT7 982 aa10.56□□□□□ -0.72
AC012494.1-201ENST00000439259 NLRP3Q96P20 1036 aa10.56□□□□□ -0.72
AC012494.1-201ENST00000439259 EMILIN3Q9NT22 766 aa10.56□□□□□ -0.72
AC012494.1-201ENST00000439259 COL4A5P29400 1685 aa10.55□□□□□ -0.72
AC012494.1-201ENST00000439259 PPEF1O14829 653 aaPredicted RBP10.55□□□□□ -0.72
AC012494.1-201ENST00000439259 ZNF853P0CG23 659 aa10.55□□□□□ -0.72
AC012494.1-201ENST00000439259 TCIRG1Q13488 830 aa10.55□□□□□ -0.72
AC012494.1-201ENST00000439259 CAMK2BQ13554 666 aa10.55□□□□□ -0.72
AC012494.1-201ENST00000439259 SLC10A5Q5PT55 438 aa10.55□□□□□ -0.72
AC012494.1-201ENST00000439259 CRAMP1Q96RY5 1269 aa10.55□□□□□ -0.72
AC012494.1-201ENST00000439259 PSMD1Q99460 953 aa10.55□□□□□ -0.72
AC012494.1-201ENST00000439259 RIC1Q4ADV7 1423 aa10.55□□□□□ -0.72
AC012494.1-201ENST00000439259 ATP5J2-PTCD1G3V325 749 aa10.54□□□□□ -0.72
AC012494.1-201ENST00000439259 FZD9O00144 591 aa10.54□□□□□ -0.72
AC012494.1-201ENST00000439259 EAPPQ56P03 285 aaPredicted RBP10.54□□□□□ -0.72
AC012494.1-201ENST00000439259 RTL5Q5HYW3 569 aaPredicted RBP10.54□□□□□ -0.72
AC012494.1-201ENST00000439259 FBXW7Q969H0 707 aa10.54□□□□□ -0.72
AC012494.1-201ENST00000439259 TAF1DQ9H5J8 278 aaPredicted RBP10.54□□□□□ -0.72
AC012494.1-201ENST00000439259 TRMT112Q9UI30 125 aaKnown RBP10.54□□□□□ -0.72
AC012494.1-201ENST00000439259 ABCC4O15439 1325 aa10.54□□□□□ -0.72
AC012494.1-201ENST00000439259 RNF123Q5XPI4 1314 aa10.54□□□□□ -0.72
AC012494.1-201ENST00000439259 HSP90AB3PQ58FF7 597 aa10.53□□□□□ -0.72
AC012494.1-201ENST00000439259 PLBD2Q8NHP8 589 aa10.53□□□□□ -0.72
AC012494.1-201ENST00000439259 PHAXQ9H814 394 aaKnown RBP10.53□□□□□ -0.72
AC012494.1-201ENST00000439259 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.53□□□□□ -0.72
AC012494.1-201ENST00000439259 DBF4Q9UBU7 674 aaPredicted RBP10.53□□□□□ -0.72
AC012494.1-201ENST00000439259 GJA3Q9Y6H8 435 aa10.53□□□□□ -0.72
AC012494.1-201ENST00000439259 IQCA1LA6NCM1 817 aa10.52□□□□□ -0.73
AC012494.1-201ENST00000439259 HOXB7P09629 217 aa10.52□□□□□ -0.73
AC012494.1-201ENST00000439259 AOC3Q16853 763 aa10.52□□□□□ -0.73
AC012494.1-201ENST00000439259 CC2D2BQ6DHV5 1058 aa10.52□□□□□ -0.73
AC012494.1-201ENST00000439259 LARGE2Q8N3Y3 721 aa10.52□□□□□ -0.73
AC012494.1-201ENST00000439259 C8orf58Q8NAV2 365 aa10.52□□□□□ -0.73
AC012494.1-201ENST00000439259 JDP2Q8WYK2 163 aa10.52□□□□□ -0.73
AC012494.1-201ENST00000439259 FAM89AQ96GI7 184 aa10.52□□□□□ -0.73
AC012494.1-201ENST00000439259 ZBED2Q9BTP6 218 aa10.52□□□□□ -0.73
AC012494.1-201ENST00000439259 ISCA1Q9BUE6 129 aa10.52□□□□□ -0.73
AC012494.1-201ENST00000439259 IFT57Q9NWB7 429 aa10.52□□□□□ -0.73
AC012494.1-201ENST00000439259 HACL1Q9UJ83 578 aa10.52□□□□□ -0.73
AC012494.1-201ENST00000439259 SH3TC1Q8TE82 1336 aa10.52□□□□□ -0.73
AC012494.1-201ENST00000439259 PPIP5K2O43314 1243 aa10.51□□□□□ -0.73
AC012494.1-201ENST00000439259 EPHX2P34913 555 aa10.51□□□□□ -0.73
AC012494.1-201ENST00000439259 GNAI1P63096 354 aa10.51□□□□□ -0.73
AC012494.1-201ENST00000439259 LDHDQ86WU2 507 aa10.51□□□□□ -0.73
AC012494.1-201ENST00000439259 TSPYL6Q8N831 410 aa10.51□□□□□ -0.73
AC012494.1-201ENST00000439259 JMYQ8N9B5 988 aa10.51□□□□□ -0.73
AC012494.1-201ENST00000439259 TSR2Q969E8 191 aaKnown RBP10.51□□□□□ -0.73
AC012494.1-201ENST00000439259 ADAM33Q9BZ11 813 aa10.51□□□□□ -0.73
AC012494.1-201ENST00000439259 NBPF3Q9H094 633 aa10.51□□□□□ -0.73
AC012494.1-201ENST00000439259 HYPKQ9NX55 129 aa10.51□□□□□ -0.73
AC012494.1-201ENST00000439259 ATP6V0A2Q9Y487 856 aa10.51□□□□□ -0.73
AC012494.1-201ENST00000439259 ANKRD36CQ5JPF3 1778 aa10.5□□□□□ -0.73
AC012494.1-201ENST00000439259 PPP1R3GB7ZBB8 358 aa10.5□□□□□ -0.73
AC012494.1-201ENST00000439259 EPS15P42566 896 aa10.5□□□□□ -0.73
AC012494.1-201ENST00000439259 EIF6P56537 245 aaKnown RBP10.5□□□□□ -0.73
AC012494.1-201ENST00000439259 IFFO2Q5TF58 517 aa10.5□□□□□ -0.73
AC012494.1-201ENST00000439259 MAP1SQ66K74 1059 aaPredicted RBP10.5□□□□□ -0.73
AC012494.1-201ENST00000439259 DDX46Q7L014 1031 aaKnown RBP10.5□□□□□ -0.73
AC012494.1-201ENST00000439259 RIC3Q7Z5B4 369 aa10.5□□□□□ -0.73
AC012494.1-201ENST00000439259 GPC2Q8N158 579 aa10.5□□□□□ -0.73
AC012494.1-201ENST00000439259 JARID2Q92833 1246 aaPredicted RBP10.5□□□□□ -0.73
AC012494.1-201ENST00000439259 KCTD12Q96CX2 325 aaKnown RBP10.5□□□□□ -0.73
AC012494.1-201ENST00000439259 LAMB2P55268 1798 aa10.49□□□□□ -0.73
AC012494.1-201ENST00000439259 TAF1P21675 1872 aa10.49□□□□□ -0.73
AC012494.1-201ENST00000439259 ITGBL1O95965 494 aaPredicted RBP10.49□□□□□ -0.73
AC012494.1-201ENST00000439259 SCNN1DP51172 638 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms