RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 HFE2Q6ZVN8 426 aa6.5□□□□□ -1.37
HMGB3P12-201ENST00000438745 EDEM1Q92611 657 aa6.5□□□□□ -1.37
HMGB3P12-201ENST00000438745 GGNBP2Q9H3C7 697 aa6.5□□□□□ -1.37
HMGB3P12-201ENST00000438745 FAM13AO94988 1023 aa6.49□□□□□ -1.37
HMGB3P12-201ENST00000438745 KIF4AO95239 1232 aa6.49□□□□□ -1.37
HMGB3P12-201ENST00000438745 PDGFAP04085 211 aa6.49□□□□□ -1.37
HMGB3P12-201ENST00000438745 PDE4CQ08493 712 aa6.49□□□□□ -1.37
HMGB3P12-201ENST00000438745 COL13A1Q5TAT6 717 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P12-201ENST00000438745 ELP3Q9H9T3 547 aa6.49□□□□□ -1.37
HMGB3P12-201ENST00000438745 ABI2Q9NYB9 513 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P12-201ENST00000438745 EGFL7Q9UHF1 273 aa6.49□□□□□ -1.37
HMGB3P12-201ENST00000438745 K7ELQ4 463 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P12-201ENST00000438745 TTC39BQ5VTQ0 682 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P12-201ENST00000438745 B4GALNT3Q6L9W6 998 aa6.48□□□□□ -1.37
HMGB3P12-201ENST00000438745 TXNDC2Q86VQ3 553 aa6.48□□□□□ -1.37
HMGB3P12-201ENST00000438745 DMRTC2Q8IXT2 367 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P12-201ENST00000438745 DTWD1Q8N5C7 304 aa6.48□□□□□ -1.37
HMGB3P12-201ENST00000438745 RETREG2Q8NC44 543 aa6.48□□□□□ -1.37
HMGB3P12-201ENST00000438745 PLD4Q96BZ4 506 aa6.48□□□□□ -1.37
HMGB3P12-201ENST00000438745 SMG9Q9H0W8 520 aaKnown RBP6.48□□□□□ -1.37
HMGB3P12-201ENST00000438745 TMEM63CQ9P1W3 806 aa6.48□□□□□ -1.37
HMGB3P12-201ENST00000438745 FAM229AH3BQW9 127 aa6.47□□□□□ -1.37
HMGB3P12-201ENST00000438745 FZD6O60353 706 aa6.47□□□□□ -1.37
HMGB3P12-201ENST00000438745 ICMTO60725 284 aa6.47□□□□□ -1.37
HMGB3P12-201ENST00000438745 ELNP15502 786 aa6.47□□□□□ -1.37
HMGB3P12-201ENST00000438745 DNM1Q05193 864 aaKnown RBP6.47□□□□□ -1.37
HMGB3P12-201ENST00000438745 GRIK4Q16099 956 aa6.47□□□□□ -1.37
HMGB3P12-201ENST00000438745 FMR1NBQ8N0W7 255 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P12-201ENST00000438745 NSUN5Q96P11 429 aaKnown RBP6.47□□□□□ -1.37
HMGB3P12-201ENST00000438745 CNTN3Q9P232 1028 aa6.47□□□□□ -1.37
HMGB3P12-201ENST00000438745 SALL4Q9UJQ4 1053 aa6.47□□□□□ -1.37
HMGB3P12-201ENST00000438745 GHRHP01286 108 aa6.46□□□□□ -1.38
HMGB3P12-201ENST00000438745 CYP2E1P05181 493 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P12-201ENST00000438745 SELPP16109 830 aa6.46□□□□□ -1.38
HMGB3P12-201ENST00000438745 EIF2AK2P19525 551 aaKnown RBP6.46□□□□□ -1.38
HMGB3P12-201ENST00000438745 HYAL2Q12891 473 aa6.46□□□□□ -1.38
HMGB3P12-201ENST00000438745 FBXO11Q86XK2 927 aa6.46□□□□□ -1.38
HMGB3P12-201ENST00000438745 CACTIN-AS1Q8N1I8 211 aa6.46□□□□□ -1.38
HMGB3P12-201ENST00000438745 CEP120Q8N960 986 aa6.46□□□□□ -1.38
HMGB3P12-201ENST00000438745 LENG1Q96BZ8 264 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P12-201ENST00000438745 POLIQ9UNA4 740 aa6.46□□□□□ -1.38
HMGB3P12-201ENST00000438745 C9orf172C9J069 976 aa6.45□□□□□ -1.38
HMGB3P12-201ENST00000438745 PCSK2P16519 638 aa6.45□□□□□ -1.38
HMGB3P12-201ENST00000438745 ITGB7P26010 798 aa6.45□□□□□ -1.38
HMGB3P12-201ENST00000438745 USP5P45974 858 aa6.45□□□□□ -1.38
HMGB3P12-201ENST00000438745 ZNF438Q7Z4V0 828 aa6.45□□□□□ -1.38
HMGB3P12-201ENST00000438745 NACC1Q96RE7 527 aa6.45□□□□□ -1.38
HMGB3P12-201ENST00000438745 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P12-201ENST00000438745 A6NHS1 94 aa6.44□□□□□ -1.38
HMGB3P12-201ENST00000438745 APBA3O96018 575 aa6.44□□□□□ -1.38
HMGB3P12-201ENST00000438745 ABL1P00519 1130 aa6.44□□□□□ -1.38
HMGB3P12-201ENST00000438745 SERPINB4P48594 390 aa6.44□□□□□ -1.38
HMGB3P12-201ENST00000438745 RAC1P63000 192 aa6.44□□□□□ -1.38
HMGB3P12-201ENST00000438745 ADGRE1Q14246 886 aa6.44□□□□□ -1.38
HMGB3P12-201ENST00000438745 WFDC8Q8IUA0 241 aa6.44□□□□□ -1.38
HMGB3P12-201ENST00000438745 C1orf127Q8N9H9 656 aa6.44□□□□□ -1.38
HMGB3P12-201ENST00000438745 PMEPA1Q969W9 287 aa6.44□□□□□ -1.38
HMGB3P12-201ENST00000438745 RBSNQ9H1K0 784 aa6.44□□□□□ -1.38
HMGB3P12-201ENST00000438745 CHRDQ9H2X0 955 aa6.44□□□□□ -1.38
HMGB3P12-201ENST00000438745 ANO2Q9NQ90 1003 aa6.44□□□□□ -1.38
HMGB3P12-201ENST00000438745 CCDC87Q9NVE4 849 aa6.44□□□□□ -1.38
HMGB3P12-201ENST00000438745 NFKBIEO00221 500 aa6.43□□□□□ -1.38
HMGB3P12-201ENST00000438745 DEAF1O75398 565 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P12-201ENST00000438745 GATA4P43694 442 aa6.43□□□□□ -1.38
HMGB3P12-201ENST00000438745 EHHADHQ08426 723 aa6.43□□□□□ -1.38
HMGB3P12-201ENST00000438745 ZNF211Q13398 564 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P12-201ENST00000438745 GJD3Q8N144 294 aa6.43□□□□□ -1.38
HMGB3P12-201ENST00000438745 SPACA7Q96KW9 195 aa6.43□□□□□ -1.38
HMGB3P12-201ENST00000438745 DLL1O00548 723 aa6.42□□□□□ -1.38
HMGB3P12-201ENST00000438745 TM4SF5O14894 197 aa6.42□□□□□ -1.38
HMGB3P12-201ENST00000438745 TNFRSF21O75509 655 aa6.42□□□□□ -1.38
HMGB3P12-201ENST00000438745 ARHGAP4P98171 946 aa6.42□□□□□ -1.38
HMGB3P12-201ENST00000438745 ATP11AP98196 1134 aa6.42□□□□□ -1.38
HMGB3P12-201ENST00000438745 DOC2BQ14184 412 aa6.42□□□□□ -1.38
HMGB3P12-201ENST00000438745 C8orf34Q49A92 452 aa6.42□□□□□ -1.38
HMGB3P12-201ENST00000438745 IGF2-ASQ6U949 168 aa6.42□□□□□ -1.38
HMGB3P12-201ENST00000438745 ADAMTSL4Q6UY14 1074 aa6.42□□□□□ -1.38
HMGB3P12-201ENST00000438745 IL22RA1Q8N6P7 574 aa6.42□□□□□ -1.38
HMGB3P12-201ENST00000438745 PBX4Q9BYU1 374 aa6.42□□□□□ -1.38
HMGB3P12-201ENST00000438745 ADAM19Q9H013 955 aa6.42□□□□□ -1.38
HMGB3P12-201ENST00000438745 RASSF4Q9H2L5 321 aa6.42□□□□□ -1.38
HMGB3P12-201ENST00000438745 TRIM33Q9UPN9 1127 aa6.42□□□□□ -1.38
HMGB3P12-201ENST00000438745 CES1P23141 567 aa6.41□□□□□ -1.38
HMGB3P12-201ENST00000438745 NRG1Q02297 640 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P12-201ENST00000438745 AAMPQ13685 434 aa6.41□□□□□ -1.38
HMGB3P12-201ENST00000438745 SETDB1Q15047 1291 aa6.41□□□□□ -1.38
HMGB3P12-201ENST00000438745 GDF6Q6KF10 455 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P12-201ENST00000438745 SHISA2Q6UWI4 295 aa6.41□□□□□ -1.38
HMGB3P12-201ENST00000438745 POP1Q99575 1024 aaKnown RBP6.41□□□□□ -1.38
HMGB3P12-201ENST00000438745 MUC3BQ9H195 1237 aa6.41□□□□□ -1.38
HMGB3P12-201ENST00000438745 SRA1Q9HD15 236 aaKnown RBP6.41□□□□□ -1.38
HMGB3P12-201ENST00000438745 SMNDC1O75940 238 aaKnown RBP eCLIP6.4□□□□□ -1.38
HMGB3P12-201ENST00000438745 MBTPS1Q14703 1052 aa6.4□□□□□ -1.38
HMGB3P12-201ENST00000438745 CEP135Q66GS9 1140 aa6.4□□□□□ -1.38
HMGB3P12-201ENST00000438745 NCAPG2Q86XI2 1143 aa6.4□□□□□ -1.38
HMGB3P12-201ENST00000438745 MAP4K3Q8IVH8 894 aa6.4□□□□□ -1.38
HMGB3P12-201ENST00000438745 Q8N3U1 123 aa6.4□□□□□ -1.38
HMGB3P12-201ENST00000438745 TTC16Q8NEE8 873 aa6.4□□□□□ -1.38
HMGB3P12-201ENST00000438745 DZANK1Q9NVP4 752 aa6.4□□□□□ -1.38
HMGB3P12-201ENST00000438745 GNEQ9Y223 722 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms