RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 GPLD1P80108 840 aa6.65□□□□□ -1.35
TRAPPC13-204ENST00000438419 MLLT1Q03111 559 aaPredicted RBP6.65□□□□□ -1.35
TRAPPC13-204ENST00000438419 COL9A3Q14050 684 aaPredicted RBP6.65□□□□□ -1.35
TRAPPC13-204ENST00000438419 PDE12Q6L8Q7 609 aaKnown RBP6.65□□□□□ -1.35
TRAPPC13-204ENST00000438419 GJD3Q8N144 294 aa6.65□□□□□ -1.35
TRAPPC13-204ENST00000438419 MICALL1Q8N3F8 863 aa6.65□□□□□ -1.35
TRAPPC13-204ENST00000438419 RRAGCQ9HB90 399 aa6.65□□□□□ -1.35
TRAPPC13-204ENST00000438419 CNTN3Q9P232 1028 aa6.65□□□□□ -1.35
TRAPPC13-204ENST00000438419 CYP2E1P05181 493 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC13-204ENST00000438419 RPLP1P05386 114 aaKnown RBP6.64□□□□□ -1.35
TRAPPC13-204ENST00000438419 C8orf34Q49A92 452 aa6.64□□□□□ -1.35
TRAPPC13-204ENST00000438419 COL13A1Q5TAT6 717 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC13-204ENST00000438419 C8orf86Q6ZUL3 223 aa6.64□□□□□ -1.35
TRAPPC13-204ENST00000438419 OR13H1Q8NG92 308 aa6.64□□□□□ -1.35
TRAPPC13-204ENST00000438419 ABI2Q9NYB9 513 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC13-204ENST00000438419 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC13-204ENST00000438419 SCO2A0A1W2PP80 73 aa6.63□□□□□ -1.35
TRAPPC13-204ENST00000438419 J3QW42 95 aa6.63□□□□□ -1.35
TRAPPC13-204ENST00000438419 M0R082 166 aa6.63□□□□□ -1.35
TRAPPC13-204ENST00000438419 PSAPP07602 524 aa6.63□□□□□ -1.35
TRAPPC13-204ENST00000438419 PCSK2P16519 638 aa6.63□□□□□ -1.35
TRAPPC13-204ENST00000438419 SOX18P35713 384 aa6.63□□□□□ -1.35
TRAPPC13-204ENST00000438419 PLAURQ03405 335 aa6.63□□□□□ -1.35
TRAPPC13-204ENST00000438419 HFE2Q6ZVN8 426 aa6.63□□□□□ -1.35
TRAPPC13-204ENST00000438419 ZNF438Q7Z4V0 828 aa6.63□□□□□ -1.35
TRAPPC13-204ENST00000438419 ZNF417Q8TAU3 575 aa6.63□□□□□ -1.35
TRAPPC13-204ENST00000438419 ZNF587Q96SQ5 575 aaPredicted RBP6.63□□□□□ -1.35
TRAPPC13-204ENST00000438419 KRBA1A5PL33 1030 aa6.62□□□□□ -1.35
TRAPPC13-204ENST00000438419 CPB1P15086 417 aa6.62□□□□□ -1.35
TRAPPC13-204ENST00000438419 USP5P45974 858 aa6.62□□□□□ -1.35
TRAPPC13-204ENST00000438419 PCSK7Q16549 785 aa6.62□□□□□ -1.35
TRAPPC13-204ENST00000438419 PERM1Q5SV97 790 aa6.62□□□□□ -1.35
TRAPPC13-204ENST00000438419 TTC39BQ5VTQ0 682 aaPredicted RBP6.62□□□□□ -1.35
TRAPPC13-204ENST00000438419 SND1Q7KZF4 910 aaKnown RBP eCLIP6.62□□□□□ -1.35
TRAPPC13-204ENST00000438419 FAM35AQ86V20 835 aa6.62□□□□□ -1.35
TRAPPC13-204ENST00000438419 C1orf127Q8N9H9 656 aa6.62□□□□□ -1.35
TRAPPC13-204ENST00000438419 NSUN5Q96P11 429 aaKnown RBP6.62□□□□□ -1.35
TRAPPC13-204ENST00000438419 LPIN3Q9BQK8 851 aa6.62□□□□□ -1.35
TRAPPC13-204ENST00000438419 CHRDQ9H2X0 955 aa6.62□□□□□ -1.35
TRAPPC13-204ENST00000438419 PRDM6Q9NQX0 595 aa6.62□□□□□ -1.35
TRAPPC13-204ENST00000438419 BIN2Q9UBW5 565 aaPredicted RBP6.62□□□□□ -1.35
TRAPPC13-204ENST00000438419 LOC102724428A0A0B4J2F2 783 aa6.61□□□□□ -1.35
TRAPPC13-204ENST00000438419 IGHA2P01877 340 aa6.61□□□□□ -1.35
TRAPPC13-204ENST00000438419 SIK1P57059 783 aa6.61□□□□□ -1.35
TRAPPC13-204ENST00000438419 PSAPL1Q6NUJ1 521 aa6.61□□□□□ -1.35
TRAPPC13-204ENST00000438419 NUDT8Q8WV74 236 aa6.61□□□□□ -1.35
TRAPPC13-204ENST00000438419 TRIM11Q96F44 468 aa6.61□□□□□ -1.35
TRAPPC13-204ENST00000438419 SUV39H2Q9H5I1 410 aa6.61□□□□□ -1.35
TRAPPC13-204ENST00000438419 BRPF3Q9ULD4 1205 aa6.61□□□□□ -1.35
TRAPPC13-204ENST00000438419 MKL2Q9ULH7 1088 aa6.61□□□□□ -1.35
TRAPPC13-204ENST00000438419 TNFRSF21O75509 655 aa6.6□□□□□ -1.35
TRAPPC13-204ENST00000438419 GRIK5Q16478 980 aa6.6□□□□□ -1.35
TRAPPC13-204ENST00000438419 GZF1Q9H116 711 aaPredicted RBP6.6□□□□□ -1.35
TRAPPC13-204ENST00000438419 FOXD3Q9UJU5 478 aaPredicted RBP6.6□□□□□ -1.35
TRAPPC13-204ENST00000438419 KIF4AO95239 1232 aa6.59□□□□□ -1.35
TRAPPC13-204ENST00000438419 NID1P14543 1247 aa6.59□□□□□ -1.35
TRAPPC13-204ENST00000438419 COL8A1P27658 744 aa6.59□□□□□ -1.35
TRAPPC13-204ENST00000438419 EHHADHQ08426 723 aa6.59□□□□□ -1.35
TRAPPC13-204ENST00000438419 TRIM26Q12899 539 aaPredicted RBP6.59□□□□□ -1.35
TRAPPC13-204ENST00000438419 ILDR2Q71H61 639 aa6.59□□□□□ -1.35
TRAPPC13-204ENST00000438419 TTC16Q8NEE8 873 aa6.59□□□□□ -1.35
TRAPPC13-204ENST00000438419 FAM129BQ96TA1 746 aa6.59□□□□□ -1.35
TRAPPC13-204ENST00000438419 FRRS1LQ9P0K9 344 aa6.59□□□□□ -1.35
TRAPPC13-204ENST00000438419 GNB5O14775 395 aa6.59□□□□□ -1.36
TRAPPC13-204ENST00000438419 NDUFB5O43674 189 aa6.59□□□□□ -1.36
TRAPPC13-204ENST00000438419 LILRB5O75023 590 aa6.59□□□□□ -1.36
TRAPPC13-204ENST00000438419 EIF2AK2P19525 551 aaKnown RBP6.59□□□□□ -1.36
TRAPPC13-204ENST00000438419 AFF1P51825 1210 aaKnown RBP6.59□□□□□ -1.36
TRAPPC13-204ENST00000438419 HYAL2Q12891 473 aa6.59□□□□□ -1.36
TRAPPC13-204ENST00000438419 ELMSAN1Q6PJG2 1045 aa6.59□□□□□ -1.36
TRAPPC13-204ENST00000438419 TTC9Q92623 222 aa6.59□□□□□ -1.36
TRAPPC13-204ENST00000438419 SMG9Q9H0W8 520 aaKnown RBP6.59□□□□□ -1.36
TRAPPC13-204ENST00000438419 JPH1Q9HDC5 661 aaPredicted RBP6.59□□□□□ -1.36
TRAPPC13-204ENST00000438419 KANSL3Q9P2N6 904 aa6.59□□□□□ -1.36
TRAPPC13-204ENST00000438419 SALL4Q9UJQ4 1053 aa6.59□□□□□ -1.36
TRAPPC13-204ENST00000438419 RGS9O75916 674 aaPredicted RBP6.58□□□□□ -1.36
TRAPPC13-204ENST00000438419 LCE1DQ5T752 114 aa6.58□□□□□ -1.36
TRAPPC13-204ENST00000438419 CEP120Q8N960 986 aa6.58□□□□□ -1.36
TRAPPC13-204ENST00000438419 PLD4Q96BZ4 506 aa6.58□□□□□ -1.36
TRAPPC13-204ENST00000438419 CITED4Q96RK1 184 aa6.58□□□□□ -1.36
TRAPPC13-204ENST00000438419 PLVAPQ9BX97 442 aa6.58□□□□□ -1.36
TRAPPC13-204ENST00000438419 RBCK1Q9BYM8 510 aa6.58□□□□□ -1.36
TRAPPC13-204ENST00000438419 EREGO14944 169 aa6.57□□□□□ -1.36
TRAPPC13-204ENST00000438419 GPR182O15218 404 aa6.57□□□□□ -1.36
TRAPPC13-204ENST00000438419 CES1P23141 567 aa6.57□□□□□ -1.36
TRAPPC13-204ENST00000438419 ATP11AP98196 1134 aa6.57□□□□□ -1.36
TRAPPC13-204ENST00000438419 ALYREFQ86V81 257 aaKnown RBP6.57□□□□□ -1.36
TRAPPC13-204ENST00000438419 SNX29Q8TEQ0 813 aa6.57□□□□□ -1.36
TRAPPC13-204ENST00000438419 SEMA6BQ9H3T3 888 aa6.57□□□□□ -1.36
TRAPPC13-204ENST00000438419 ZFYVE28Q9HCC9 887 aa6.57□□□□□ -1.36
TRAPPC13-204ENST00000438419 DCTN4Q9UJW0 460 aa6.57□□□□□ -1.36
TRAPPC13-204ENST00000438419 COBLO75128 1261 aa6.56□□□□□ -1.36
TRAPPC13-204ENST00000438419 PHACTR2O75167 634 aa6.56□□□□□ -1.36
TRAPPC13-204ENST00000438419 GHRHP01286 108 aa6.56□□□□□ -1.36
TRAPPC13-204ENST00000438419 ACPPP15309 386 aa6.56□□□□□ -1.36
TRAPPC13-204ENST00000438419 ADAMTSL4Q6UY14 1074 aa6.56□□□□□ -1.36
TRAPPC13-204ENST00000438419 TMC7Q7Z402 723 aa6.56□□□□□ -1.36
TRAPPC13-204ENST00000438419 ITGB7P26010 798 aa6.55□□□□□ -1.36
TRAPPC13-204ENST00000438419 PDE3BQ13370 1112 aa6.55□□□□□ -1.36
TRAPPC13-204ENST00000438419 TMCO4Q5TGY1 634 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms