RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 POLR3GO15318 223 aaPredicted RBP12.31□□□□□ -0.44
SCAF4-203ENST00000434667 DHX37Q8IY37 1157 aaKnown RBP12.31□□□□□ -0.44
SCAF4-203ENST00000434667 LRRC59Q96AG4 307 aaKnown RBP12.31□□□□□ -0.44
SCAF4-203ENST00000434667 DNAJC2Q99543 621 aaKnown RBP12.31□□□□□ -0.44
SCAF4-203ENST00000434667 CCAR1Q8IX12 1150 aaKnown RBP12.3□□□□□ -0.44
SCAF4-203ENST00000434667 ERBB3P21860 1342 aa12.3□□□□□ -0.44
SCAF4-203ENST00000434667 TTC21AQ8NDW8 1320 aa12.3□□□□□ -0.44
SCAF4-203ENST00000434667 SYT10Q6XYQ8 523 aa12.3□□□□□ -0.44
SCAF4-203ENST00000434667 Q6ZUG5 572 aa12.3□□□□□ -0.44
SCAF4-203ENST00000434667 OVOS2A0A0G2JMS6 1433 aa12.3□□□□□ -0.44
SCAF4-203ENST00000434667 RUFY2Q8WXA3 655 aa12.3□□□□□ -0.44
SCAF4-203ENST00000434667 SUCLG2Q96I99 432 aa12.3□□□□□ -0.44
SCAF4-203ENST00000434667 GPHNQ9NQX3 736 aaPredicted RBP12.3□□□□□ -0.44
SCAF4-203ENST00000434667 SH2B1Q9NRF2 756 aaPredicted RBP12.3□□□□□ -0.44
SCAF4-203ENST00000434667 TEFQ10587 303 aa12.29□□□□□ -0.44
SCAF4-203ENST00000434667 IQCB1Q15051 598 aa12.29□□□□□ -0.44
SCAF4-203ENST00000434667 TERF2Q15554 542 aa12.29□□□□□ -0.44
SCAF4-203ENST00000434667 TDRD7Q8NHU6 1098 aaKnown RBP12.29□□□□□ -0.44
SCAF4-203ENST00000434667 ZSCAN31Q96LW9 406 aaPredicted RBP12.29□□□□□ -0.44
SCAF4-203ENST00000434667 BICC1Q9H694 974 aaKnown RBP12.29□□□□□ -0.44
SCAF4-203ENST00000434667 A0A1B0GVL5 298 aa12.29□□□□□ -0.44
SCAF4-203ENST00000434667 RPS6KB1P23443 525 aa12.29□□□□□ -0.44
SCAF4-203ENST00000434667 PDE4CQ08493 712 aa12.29□□□□□ -0.44
SCAF4-203ENST00000434667 MAP4K1Q92918 833 aa12.29□□□□□ -0.44
SCAF4-203ENST00000434667 USP28Q96RU2 1077 aa12.29□□□□□ -0.44
SCAF4-203ENST00000434667 ZCCHC17Q9NP64 241 aaKnown RBP12.29□□□□□ -0.44
SCAF4-203ENST00000434667 SEC31AO94979 1220 aaKnown RBP12.28□□□□□ -0.44
SCAF4-203ENST00000434667 APOBRQ0VD83 1088 aa12.28□□□□□ -0.44
SCAF4-203ENST00000434667 FEZ1Q99689 392 aa12.28□□□□□ -0.44
SCAF4-203ENST00000434667 SMC2O95347 1197 aa12.28□□□□□ -0.44
SCAF4-203ENST00000434667 MYL6BP14649 208 aa12.28□□□□□ -0.44
SCAF4-203ENST00000434667 GYS2P54840 703 aa12.28□□□□□ -0.44
SCAF4-203ENST00000434667 CCZ1BP86790 482 aa12.28□□□□□ -0.44
SCAF4-203ENST00000434667 CCZ1P86791 482 aaPredicted RBP12.28□□□□□ -0.44
SCAF4-203ENST00000434667 DDX46Q7L014 1031 aaKnown RBP12.28□□□□□ -0.44
SCAF4-203ENST00000434667 TJP1Q07157 1748 aa12.28□□□□□ -0.44
SCAF4-203ENST00000434667 NPHP3Q7Z494 1330 aa12.28□□□□□ -0.44
SCAF4-203ENST00000434667 COL15A1P39059 1388 aa12.28□□□□□ -0.44
SCAF4-203ENST00000434667 TPM3P06753 285 aa12.28□□□□□ -0.44
SCAF4-203ENST00000434667 TTLL5Q6EMB2 1281 aa12.28□□□□□ -0.44
SCAF4-203ENST00000434667 SCAND2PQ9GZW5 306 aaPredicted RBP12.28□□□□□ -0.44
SCAF4-203ENST00000434667 ESF1Q9H501 851 aaKnown RBP12.28□□□□□ -0.44
SCAF4-203ENST00000434667 ME1P48163 572 aa12.27□□□□□ -0.44
SCAF4-203ENST00000434667 SCRN1Q12765 414 aa12.27□□□□□ -0.44
SCAF4-203ENST00000434667 KAZALD1Q96I82 304 aa12.27□□□□□ -0.44
SCAF4-203ENST00000434667 POLR3DP05423 398 aaPredicted RBP12.27□□□□□ -0.45
SCAF4-203ENST00000434667 CEBPAP49715 358 aaPredicted RBP12.27□□□□□ -0.45
SCAF4-203ENST00000434667 IRX5P78411 483 aaPredicted RBP12.27□□□□□ -0.45
SCAF4-203ENST00000434667 RESTQ13127 1097 aa12.27□□□□□ -0.45
SCAF4-203ENST00000434667 DHX40Q8IX18 779 aaKnown RBP12.27□□□□□ -0.45
SCAF4-203ENST00000434667 AOX1Q06278 1338 aa12.27□□□□□ -0.45
SCAF4-203ENST00000434667 ADCY9O60503 1353 aa12.27□□□□□ -0.45
SCAF4-203ENST00000434667 LTKP29376 864 aa12.27□□□□□ -0.45
SCAF4-203ENST00000434667 HOXC9P31274 260 aa12.27□□□□□ -0.45
SCAF4-203ENST00000434667 EIF4A1P60842 406 aaKnown RBP12.27□□□□□ -0.45
SCAF4-203ENST00000434667 EPHA10Q5JZY3 1008 aa12.27□□□□□ -0.45
SCAF4-203ENST00000434667 KRT222Q8N1A0 295 aa12.27□□□□□ -0.45
SCAF4-203ENST00000434667 EVI5LQ96CN4 794 aa12.27□□□□□ -0.45
SCAF4-203ENST00000434667 DDX19AQ9NUU7 478 aaKnown RBP12.27□□□□□ -0.45
SCAF4-203ENST00000434667 IGSF1Q8N6C5 1336 aa12.27□□□□□ -0.45
SCAF4-203ENST00000434667 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.26□□□□□ -0.45
SCAF4-203ENST00000434667 TMC6Q7Z403 805 aa12.26□□□□□ -0.45
SCAF4-203ENST00000434667 MORC2Q9Y6X9 1032 aaPredicted RBP12.26□□□□□ -0.45
SCAF4-203ENST00000434667 CEMIPQ8WUJ3 1361 aa12.26□□□□□ -0.45
SCAF4-203ENST00000434667 NEK11Q8NG66 645 aa12.26□□□□□ -0.45
SCAF4-203ENST00000434667 FAM69CQ0P6D2 419 aa12.26□□□□□ -0.45
SCAF4-203ENST00000434667 DPCR1Q3MIW9 517 aa12.26□□□□□ -0.45
SCAF4-203ENST00000434667 STOX1Q6ZVD7 989 aa12.26□□□□□ -0.45
SCAF4-203ENST00000434667 ABTB2Q8N961 1025 aa12.26□□□□□ -0.45
SCAF4-203ENST00000434667 FSIP1Q8NA03 581 aa12.26□□□□□ -0.45
SCAF4-203ENST00000434667 ZNF330Q9Y3S2 320 aaPredicted RBP12.26□□□□□ -0.45
SCAF4-203ENST00000434667 PAXBP1Q9Y5B6 917 aa12.26□□□□□ -0.45
SCAF4-203ENST00000434667 HEG1Q9ULI3 1381 aa12.26□□□□□ -0.45
SCAF4-203ENST00000434667 BTBD11A6QL63 1104 aa12.25□□□□□ -0.45
SCAF4-203ENST00000434667 G3BP1Q13283 466 aaKnown RBP eCLIP12.25□□□□□ -0.452e-6■□□□□ 9.7
SCAF4-203ENST00000434667 SLC39A6Q13433 755 aa12.25□□□□□ -0.45
SCAF4-203ENST00000434667 SF3A1Q15459 793 aaKnown RBP12.25□□□□□ -0.45
SCAF4-203ENST00000434667 NBPF6Q5VWK0 638 aa12.25□□□□□ -0.45
SCAF4-203ENST00000434667 NBPF4Q96M43 638 aa12.25□□□□□ -0.45
SCAF4-203ENST00000434667 IFNKQ9P0W0 207 aa12.25□□□□□ -0.45
SCAF4-203ENST00000434667 HSP90AB3PQ58FF7 597 aa12.25□□□□□ -0.45
SCAF4-203ENST00000434667 E4F1Q66K89 784 aaPredicted RBP12.25□□□□□ -0.45
SCAF4-203ENST00000434667 NBPF11Q86T75 865 aa12.25□□□□□ -0.45
SCAF4-203ENST00000434667 CERS3Q8IU89 383 aa12.25□□□□□ -0.45
SCAF4-203ENST00000434667 ZNF397Q8NF99 534 aaPredicted RBP12.25□□□□□ -0.45
SCAF4-203ENST00000434667 CYP21A2P08686 494 aa12.25□□□□□ -0.45
SCAF4-203ENST00000434667 LMOD1P29536 600 aaPredicted RBP12.25□□□□□ -0.45
SCAF4-203ENST00000434667 SDF4Q9BRK5 362 aa12.25□□□□□ -0.45
SCAF4-203ENST00000434667 ATP1A3P13637 1013 aa12.24□□□□□ -0.45
SCAF4-203ENST00000434667 NYAP1Q6ZVC0 841 aa12.24□□□□□ -0.45
SCAF4-203ENST00000434667 XPO4Q9C0E2 1151 aaKnown RBP12.24□□□□□ -0.45
SCAF4-203ENST00000434667 SBNO1A3KN83 1393 aa12.24□□□□□ -0.45
SCAF4-203ENST00000434667 FLT4P35916 1363 aa12.24□□□□□ -0.45
SCAF4-203ENST00000434667 MAP3K5Q99683 1374 aa12.24□□□□□ -0.45
SCAF4-203ENST00000434667 COL22A1Q8NFW1 1626 aaPredicted RBP12.24□□□□□ -0.45
SCAF4-203ENST00000434667 TAF5LO75529 589 aa12.24□□□□□ -0.45
SCAF4-203ENST00000434667 PDCP20941 246 aa12.24□□□□□ -0.45
SCAF4-203ENST00000434667 SNW1Q13573 536 aaKnown RBP12.24□□□□□ -0.45
SCAF4-203ENST00000434667 TM6SF1Q9BZW5 370 aa12.24□□□□□ -0.45
SCAF4-203ENST00000434667 NPHP4O75161 1426 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms