RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 ECE2O60344 883 aa13.51□□□□□ -0.25
HOXD3-203ENST00000432796 ZNF280AP59817 542 aaPredicted RBP13.51□□□□□ -0.25
HOXD3-203ENST00000432796 GIGYF2Q6Y7W6 1299 aaKnown RBP13.51□□□□□ -0.25
HOXD3-203ENST00000432796 DDX46Q7L014 1031 aaKnown RBP13.51□□□□□ -0.25
HOXD3-203ENST00000432796 UTP14AQ9BVJ6 771 aaKnown RBP13.51□□□□□ -0.25
HOXD3-203ENST00000432796 RSPH6AQ9H0K4 717 aa13.51□□□□□ -0.25
HOXD3-203ENST00000432796 KCNQ5Q9NR82 932 aa13.51□□□□□ -0.25
HOXD3-203ENST00000432796 RBM27Q9P2N5 1060 aaKnown RBP13.51□□□□□ -0.25
HOXD3-203ENST00000432796 LAMA3Q16787 3333 aa13.51□□□□□ -0.25
HOXD3-203ENST00000432796 VIL1P09327 827 aaKnown RBP13.5□□□□□ -0.25
HOXD3-203ENST00000432796 ERO1AQ96HE7 468 aa13.5□□□□□ -0.25
HOXD3-203ENST00000432796 ZNF609O15014 1411 aa13.49□□□□□ -0.25
HOXD3-203ENST00000432796 RIMBP2O15034 1052 aa13.49□□□□□ -0.25
HOXD3-203ENST00000432796 TTLL12Q14166 644 aaPredicted RBP13.49□□□□□ -0.25
HOXD3-203ENST00000432796 NECTIN2Q92692 538 aa13.49□□□□□ -0.25
HOXD3-203ENST00000432796 ZNF333Q96JL9 665 aa13.49□□□□□ -0.25
HOXD3-203ENST00000432796 PHACTR3Q96KR7 559 aa13.49□□□□□ -0.25
HOXD3-203ENST00000432796 RRP7AQ9Y3A4 280 aaKnown RBP13.49□□□□□ -0.25
HOXD3-203ENST00000432796 HTATSF1O43719 755 aaKnown RBP13.48□□□□□ -0.25
HOXD3-203ENST00000432796 TCIRG1Q13488 830 aa13.48□□□□□ -0.25
HOXD3-203ENST00000432796 DOK7Q18PE1 504 aa13.48□□□□□ -0.25
HOXD3-203ENST00000432796 MCM10Q7L590 875 aa13.48□□□□□ -0.25
HOXD3-203ENST00000432796 NSFL1CQ9UNZ2 370 aaKnown RBP13.48□□□□□ -0.25
HOXD3-203ENST00000432796 C6orf229H3BNL8 230 aa13.47□□□□□ -0.25
HOXD3-203ENST00000432796 HCLS1P14317 486 aaPredicted RBP13.47□□□□□ -0.25
HOXD3-203ENST00000432796 MYL6BP14649 208 aa13.47□□□□□ -0.25
HOXD3-203ENST00000432796 INHBEP58166 350 aa13.47□□□□□ -0.25
HOXD3-203ENST00000432796 RALBP1Q15311 655 aa13.47□□□□□ -0.25
HOXD3-203ENST00000432796 AGBL3Q8NEM8 1001 aa13.47□□□□□ -0.25
HOXD3-203ENST00000432796 EYA3Q99504 573 aa13.47□□□□□ -0.25
HOXD3-203ENST00000432796 EFCC1Q9HA90 598 aa13.47□□□□□ -0.25
HOXD3-203ENST00000432796 POLLQ9UGP5 575 aa13.47□□□□□ -0.25
HOXD3-203ENST00000432796 NUP98P52948 1817 aa13.47□□□□□ -0.25
HOXD3-203ENST00000432796 POLR2AP24928 1970 aaKnown RBP13.47□□□□□ -0.25
HOXD3-203ENST00000432796 MANSC4A6NHS7 340 aaPredicted RBP13.46□□□□□ -0.25
HOXD3-203ENST00000432796 NF2P35240 595 aa13.46□□□□□ -0.25
HOXD3-203ENST00000432796 PRAMEF18Q5VWM3 479 aa13.46□□□□□ -0.25
HOXD3-203ENST00000432796 SPRYD7Q5W111 196 aa13.46□□□□□ -0.25
HOXD3-203ENST00000432796 IFNL1Q8IU54 200 aa13.46□□□□□ -0.25
HOXD3-203ENST00000432796 CD99L2Q8TCZ2 262 aa13.46□□□□□ -0.25
HOXD3-203ENST00000432796 PNISRQ8TF01 805 aaKnown RBP13.46□□□□□ -0.25
HOXD3-203ENST00000432796 PRO3102Q9H379 93 aa13.46□□□□□ -0.25
HOXD3-203ENST00000432796 MYOZ2Q9NPC6 264 aa13.46□□□□□ -0.25
HOXD3-203ENST00000432796 LRRC37AA6NMS7 1700 aa13.46□□□□□ -0.25
HOXD3-203ENST00000432796 LAMB4A4D0S4 1761 aa13.45□□□□□ -0.26
HOXD3-203ENST00000432796 PTPN12Q05209 780 aaKnown RBP13.45□□□□□ -0.26
HOXD3-203ENST00000432796 SLC4A8Q2Y0W8 1093 aa13.45□□□□□ -0.26
HOXD3-203ENST00000432796 RSBN1LQ6PCB5 846 aaPredicted RBP13.45□□□□□ -0.26
HOXD3-203ENST00000432796 SCAF8Q9UPN6 1271 aaKnown RBP13.45□□□□□ -0.26
HOXD3-203ENST00000432796 USP17L8P0C7I0 530 aa13.44□□□□□ -0.26
HOXD3-203ENST00000432796 GPSM2P81274 684 aa13.44□□□□□ -0.26
HOXD3-203ENST00000432796 TAF7Q15545 349 aaPredicted RBP13.44□□□□□ -0.26
HOXD3-203ENST00000432796 ARMC9Q7Z3E5 817 aa13.44□□□□□ -0.26
HOXD3-203ENST00000432796 NBPF11Q86T75 865 aa13.44□□□□□ -0.26
HOXD3-203ENST00000432796 UNC80Q8N2C7 3258 aa13.44□□□□□ -0.26
HOXD3-203ENST00000432796 IGF2BP3O00425 579 aaKnown RBP eCLIP13.43□□□□□ -0.26
HOXD3-203ENST00000432796 LMOD3Q0VAK6 560 aa13.43□□□□□ -0.26
HOXD3-203ENST00000432796 DCTN1Q14203 1278 aa13.43□□□□□ -0.26
HOXD3-203ENST00000432796 SLC9C1Q4G0N8 1177 aa13.43□□□□□ -0.26
HOXD3-203ENST00000432796 LDLRAD1Q5T700 205 aa13.43□□□□□ -0.26
HOXD3-203ENST00000432796 TBC1D16Q8TBP0 767 aa13.43□□□□□ -0.26
HOXD3-203ENST00000432796 GMLQ99445 158 aa13.43□□□□□ -0.26
HOXD3-203ENST00000432796 ERBB4Q15303 1308 aa13.42□□□□□ -0.26
HOXD3-203ENST00000432796 SH3TC1Q8TE82 1336 aa13.42□□□□□ -0.26
HOXD3-203ENST00000432796 DDX60Q8IY21 1712 aaKnown RBP13.42□□□□□ -0.26
HOXD3-203ENST00000432796 SP3Q02447 781 aa13.42□□□□□ -0.26
HOXD3-203ENST00000432796 NLRP10Q86W26 655 aa13.42□□□□□ -0.26
HOXD3-203ENST00000432796 CELF1Q92879 486 aaKnown RBP13.42□□□□□ -0.26
HOXD3-203ENST00000432796 ZC3H12CQ9C0D7 883 aaKnown RBP13.42□□□□□ -0.26
HOXD3-203ENST00000432796 MIS18AQ9NYP9 233 aa13.42□□□□□ -0.26
HOXD3-203ENST00000432796 ANKRD36CQ5JPF3 1778 aa13.41□□□□□ -0.26
HOXD3-203ENST00000432796 A0A1W2PPC1 479 aa13.41□□□□□ -0.26
HOXD3-203ENST00000432796 G3V3G9 751 aa13.41□□□□□ -0.26
HOXD3-203ENST00000432796 ZBTB48P10074 688 aaPredicted RBP13.41□□□□□ -0.26
HOXD3-203ENST00000432796 CAP1Q01518 475 aa13.41□□□□□ -0.26
HOXD3-203ENST00000432796 CRHR2Q13324 411 aa13.41□□□□□ -0.26
HOXD3-203ENST00000432796 WDR43Q15061 677 aaKnown RBP eCLIP13.41□□□□□ -0.26
HOXD3-203ENST00000432796 NBPF9Q3BBW0 867 aa13.41□□□□□ -0.26
HOXD3-203ENST00000432796 DCAF8Q5TAQ9 597 aa13.41□□□□□ -0.26
HOXD3-203ENST00000432796 DPF3Q92784 378 aa13.41□□□□□ -0.26
HOXD3-203ENST00000432796 TRMT112Q9UI30 125 aaKnown RBP13.41□□□□□ -0.26
HOXD3-203ENST00000432796 MYBBP1AQ9BQG0 1328 aaKnown RBP13.4□□□□□ -0.26
HOXD3-203ENST00000432796 EIF4A1P60842 406 aaKnown RBP13.4□□□□□ -0.26
HOXD3-203ENST00000432796 DDX10Q13206 875 aaKnown RBP13.4□□□□□ -0.26
HOXD3-203ENST00000432796 PRKG1Q13976 671 aa13.4□□□□□ -0.26
HOXD3-203ENST00000432796 NFE2L2Q16236 605 aa13.4□□□□□ -0.26
HOXD3-203ENST00000432796 HSP90AB3PQ58FF7 597 aa13.4□□□□□ -0.26
HOXD3-203ENST00000432796 LRP10Q7Z4F1 713 aa13.4□□□□□ -0.26
HOXD3-203ENST00000432796 PTCH2Q9Y6C5 1203 aa13.4□□□□□ -0.26
HOXD3-203ENST00000432796 SOX1O00570 391 aaPredicted RBP13.39□□□□□ -0.27
HOXD3-203ENST00000432796 ARHGEF6Q15052 776 aa13.39□□□□□ -0.27
HOXD3-203ENST00000432796 OTUD7BQ6GQQ9 843 aa13.39□□□□□ -0.27
HOXD3-203ENST00000432796 COL25A1Q9BXS0 654 aaPredicted RBP13.39□□□□□ -0.27
HOXD3-203ENST00000432796 PODXL2Q9NZ53 605 aa13.39□□□□□ -0.27
HOXD3-203ENST00000432796 ANGEL1Q9UNK9 670 aaKnown RBP13.39□□□□□ -0.27
HOXD3-203ENST00000432796 VCANP13611 3396 aa13.39□□□□□ -0.27
HOXD3-203ENST00000432796 LAMB2P55268 1798 aa13.38□□□□□ -0.27
HOXD3-203ENST00000432796 SLC10A4Q96EP9 437 aa13.38□□□□□ -0.27
HOXD3-203ENST00000432796 LRCH3Q96II8 777 aa13.38□□□□□ -0.27
HOXD3-203ENST00000432796 SCN9AQ15858 1988 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms