RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 SMG9Q9H0W8 520 aaKnown RBP6.55□□□□□ -1.36
CLK1-204ENST00000432425 APBA3O96018 575 aa6.55□□□□□ -1.36
CLK1-204ENST00000432425 PDGFAP04085 211 aa6.55□□□□□ -1.36
CLK1-204ENST00000432425 MZF1P28698 734 aaPredicted RBP6.55□□□□□ -1.36
CLK1-204ENST00000432425 FKBP4Q02790 459 aaKnown RBP eCLIP6.55□□□□□ -1.36
CLK1-204ENST00000432425 PDE12Q6L8Q7 609 aaKnown RBP6.55□□□□□ -1.36
CLK1-204ENST00000432425 OR13H1Q8NG92 308 aa6.55□□□□□ -1.36
CLK1-204ENST00000432425 ANO2Q9NQ90 1003 aa6.55□□□□□ -1.36
CLK1-204ENST00000432425 ABI2Q9NYB9 513 aaPredicted RBP6.55□□□□□ -1.36
CLK1-204ENST00000432425 FAM229AH3BQW9 127 aa6.54□□□□□ -1.36
CLK1-204ENST00000432425 J3QW42 95 aa6.54□□□□□ -1.36
CLK1-204ENST00000432425 RAC1P63000 192 aa6.54□□□□□ -1.36
CLK1-204ENST00000432425 HYAL2Q12891 473 aa6.54□□□□□ -1.36
CLK1-204ENST00000432425 C8orf34Q49A92 452 aa6.54□□□□□ -1.36
CLK1-204ENST00000432425 TTC9Q92623 222 aa6.54□□□□□ -1.36
CLK1-204ENST00000432425 PLD4Q96BZ4 506 aa6.54□□□□□ -1.36
CLK1-204ENST00000432425 ELP3Q9H9T3 547 aa6.54□□□□□ -1.36
CLK1-204ENST00000432425 NPR3P17342 541 aa6.53□□□□□ -1.36
CLK1-204ENST00000432425 DMRTC2Q8IXT2 367 aaPredicted RBP6.53□□□□□ -1.36
CLK1-204ENST00000432425 SPACA7Q96KW9 195 aa6.53□□□□□ -1.36
CLK1-204ENST00000432425 SPOCK3Q9BQ16 436 aa6.53□□□□□ -1.36
CLK1-204ENST00000432425 EGFL7Q9UHF1 273 aa6.53□□□□□ -1.36
CLK1-204ENST00000432425 A0A0A0MRY4 1105 aa6.52□□□□□ -1.37
CLK1-204ENST00000432425 C1QTNF9BB2RNN3 333 aa6.52□□□□□ -1.37
CLK1-204ENST00000432425 ITGB2P05107 769 aa6.52□□□□□ -1.37
CLK1-204ENST00000432425 MSL1Q68DK7 614 aa6.52□□□□□ -1.37
CLK1-204ENST00000432425 WFDC8Q8IUA0 241 aa6.52□□□□□ -1.37
CLK1-204ENST00000432425 NACC1Q96RE7 527 aa6.52□□□□□ -1.37
CLK1-204ENST00000432425 POLIQ9UNA4 740 aa6.52□□□□□ -1.37
CLK1-204ENST00000432425 H3BRB1 525 aa6.52□□□□□ -1.37
CLK1-204ENST00000432425 CD163Q86VB7 1156 aa6.52□□□□□ -1.37
CLK1-204ENST00000432425 GLYCTKQ8IVS8 523 aa6.52□□□□□ -1.37
CLK1-204ENST00000432425 TUT1Q9H6E5 874 aaKnown RBP6.52□□□□□ -1.37
CLK1-204ENST00000432425 TMEM63CQ9P1W3 806 aa6.52□□□□□ -1.37
CLK1-204ENST00000432425 ICMTO60725 284 aa6.51□□□□□ -1.37
CLK1-204ENST00000432425 CHRNA4P43681 627 aa6.51□□□□□ -1.37
CLK1-204ENST00000432425 USP5P45974 858 aa6.51□□□□□ -1.37
CLK1-204ENST00000432425 SERPINB4P48594 390 aa6.51□□□□□ -1.37
CLK1-204ENST00000432425 GRIK5Q16478 980 aa6.51□□□□□ -1.37
CLK1-204ENST00000432425 XKR5Q6UX68 686 aa6.51□□□□□ -1.37
CLK1-204ENST00000432425 GGNBP2Q9H3C7 697 aa6.51□□□□□ -1.37
CLK1-204ENST00000432425 A6NHS1 94 aa6.5□□□□□ -1.37
CLK1-204ENST00000432425 PROCP04070 461 aa6.5□□□□□ -1.37
CLK1-204ENST00000432425 ELNP15502 786 aa6.5□□□□□ -1.37
CLK1-204ENST00000432425 EHHADHQ08426 723 aa6.5□□□□□ -1.37
CLK1-204ENST00000432425 COL13A1Q5TAT6 717 aaPredicted RBP6.5□□□□□ -1.37
CLK1-204ENST00000432425 GDF6Q6KF10 455 aaPredicted RBP6.5□□□□□ -1.37
CLK1-204ENST00000432425 FZD6O60353 706 aa6.49□□□□□ -1.37
CLK1-204ENST00000432425 SMNDC1O75940 238 aaKnown RBP eCLIP6.49□□□□□ -1.37
CLK1-204ENST00000432425 CYP2E1P05181 493 aaPredicted RBP6.49□□□□□ -1.37
CLK1-204ENST00000432425 GRIK4Q16099 956 aa6.49□□□□□ -1.37
CLK1-204ENST00000432425 NCAPG2Q86XI2 1143 aa6.49□□□□□ -1.37
CLK1-204ENST00000432425 DTWD1Q8N5C7 304 aa6.49□□□□□ -1.37
CLK1-204ENST00000432425 KANSL3Q9P2N6 904 aa6.49□□□□□ -1.37
CLK1-204ENST00000432425 KIF4AO95239 1232 aa6.49□□□□□ -1.37
CLK1-204ENST00000432425 CES1P23141 567 aa6.49□□□□□ -1.37
CLK1-204ENST00000432425 FMR1NBQ8N0W7 255 aaPredicted RBP6.49□□□□□ -1.37
CLK1-204ENST00000432425 CACTIN-AS1Q8N1I8 211 aa6.49□□□□□ -1.37
CLK1-204ENST00000432425 CCER1Q8TC90 406 aaPredicted RBP6.49□□□□□ -1.37
CLK1-204ENST00000432425 PMEPA1Q969W9 287 aa6.49□□□□□ -1.37
CLK1-204ENST00000432425 CNTN3Q9P232 1028 aa6.49□□□□□ -1.37
CLK1-204ENST00000432425 C9orf172C9J069 976 aa6.48□□□□□ -1.37
CLK1-204ENST00000432425 GATA4P43694 442 aa6.48□□□□□ -1.37
CLK1-204ENST00000432425 ATP11AP98196 1134 aa6.48□□□□□ -1.37
CLK1-204ENST00000432425 CEP135Q66GS9 1140 aa6.48□□□□□ -1.37
CLK1-204ENST00000432425 TXNDC2Q86VQ3 553 aa6.48□□□□□ -1.37
CLK1-204ENST00000432425 IL22RA1Q8N6P7 574 aa6.48□□□□□ -1.37
CLK1-204ENST00000432425 C1orf127Q8N9H9 656 aa6.48□□□□□ -1.37
CLK1-204ENST00000432425 CCDC87Q9NVE4 849 aa6.48□□□□□ -1.37
CLK1-204ENST00000432425 TRIM33Q9UPN9 1127 aa6.48□□□□□ -1.37
CLK1-204ENST00000432425 BAG6P46379 1132 aa6.47□□□□□ -1.37
CLK1-204ENST00000432425 SNX29Q8TEQ0 813 aa6.47□□□□□ -1.37
CLK1-204ENST00000432425 RASSF4Q9H2L5 321 aa6.47□□□□□ -1.37
CLK1-204ENST00000432425 BRPF3Q9ULD4 1205 aa6.47□□□□□ -1.37
CLK1-204ENST00000432425 FAM177BA6PVY3 158 aa6.46□□□□□ -1.37
CLK1-204ENST00000432425 PHACTR2O75167 634 aa6.46□□□□□ -1.37
CLK1-204ENST00000432425 FBXO11Q86XK2 927 aa6.46□□□□□ -1.37
CLK1-204ENST00000432425 GJD3Q8N144 294 aa6.46□□□□□ -1.37
CLK1-204ENST00000432425 NDUFB5O43674 189 aa6.45□□□□□ -1.38
CLK1-204ENST00000432425 NRG1Q02297 640 aaPredicted RBP6.45□□□□□ -1.38
CLK1-204ENST00000432425 XP32Q5T750 250 aa6.45□□□□□ -1.38
CLK1-204ENST00000432425 ILDR2Q71H61 639 aa6.45□□□□□ -1.38
CLK1-204ENST00000432425 CEP120Q8N960 986 aa6.45□□□□□ -1.38
CLK1-204ENST00000432425 PBX4Q9BYU1 374 aa6.45□□□□□ -1.38
CLK1-204ENST00000432425 LACRTQ9GZZ8 138 aa6.45□□□□□ -1.38
CLK1-204ENST00000432425 MUC3BQ9H195 1237 aa6.45□□□□□ -1.38
CLK1-204ENST00000432425 SRA1Q9HD15 236 aaKnown RBP6.45□□□□□ -1.38
CLK1-204ENST00000432425 SALL4Q9UJQ4 1053 aa6.45□□□□□ -1.38
CLK1-204ENST00000432425 USP21Q9UK80 565 aa6.45□□□□□ -1.38
CLK1-204ENST00000432425 TNFRSF21O75509 655 aa6.45□□□□□ -1.38
CLK1-204ENST00000432425 BRD1O95696 1058 aa6.45□□□□□ -1.38
CLK1-204ENST00000432425 SELPP16109 830 aa6.45□□□□□ -1.38
CLK1-204ENST00000432425 SHISA2Q6UWI4 295 aa6.45□□□□□ -1.38
CLK1-204ENST00000432425 DCAF11Q8TEB1 546 aa6.45□□□□□ -1.38
CLK1-204ENST00000432425 LENG1Q96BZ8 264 aaPredicted RBP6.45□□□□□ -1.38
CLK1-204ENST00000432425 FOXD3Q9UJU5 478 aaPredicted RBP6.45□□□□□ -1.38
CLK1-204ENST00000432425 PTPRAP18433 802 aa6.44□□□□□ -1.38
CLK1-204ENST00000432425 CDC27P30260 824 aa6.44□□□□□ -1.38
CLK1-204ENST00000432425 MAP4K3Q8IVH8 894 aa6.44□□□□□ -1.38
CLK1-204ENST00000432425 PSMG3-AS1Q96PY0 264 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms