RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 FKBP1BP68106 108 aa13.27□□□□□ -0.29
ATG4B-212ENST00000430617 SLC10A5Q5PT55 438 aa13.27□□□□□ -0.29
ATG4B-212ENST00000430617 ANGEL2Q5VTE6 544 aaKnown RBP13.27□□□□□ -0.29
ATG4B-212ENST00000430617 MCM10Q7L590 875 aa13.27□□□□□ -0.29
ATG4B-212ENST00000430617 CFHR5Q9BXR6 569 aa13.27□□□□□ -0.29
ATG4B-212ENST00000430617 MRS2Q9HD23 443 aa13.27□□□□□ -0.29
ATG4B-212ENST00000430617 ZSWIM8A7E2V4 1837 aa13.26□□□□□ -0.29
ATG4B-212ENST00000430617 RIMBP2O15034 1052 aa13.26□□□□□ -0.29
ATG4B-212ENST00000430617 U2SURPO15042 1029 aaKnown RBP13.26□□□□□ -0.29
ATG4B-212ENST00000430617 RPS12P25398 132 aaKnown RBP13.26□□□□□ -0.29
ATG4B-212ENST00000430617 SCARF1Q14162 830 aa13.25□□□□□ -0.29
ATG4B-212ENST00000430617 DCTN1Q14203 1278 aa13.25□□□□□ -0.29
ATG4B-212ENST00000430617 DOK7Q18PE1 504 aa13.25□□□□□ -0.29
ATG4B-212ENST00000430617 WASHC4Q2M389 1173 aa13.25□□□□□ -0.29
ATG4B-212ENST00000430617 PRAMEF18Q5VWM3 479 aa13.25□□□□□ -0.29
ATG4B-212ENST00000430617 KIF6Q6ZMV9 814 aa13.25□□□□□ -0.29
ATG4B-212ENST00000430617 MIS18AQ9NYP9 233 aa13.25□□□□□ -0.29
ATG4B-212ENST00000430617 RRP7AQ9Y3A4 280 aaKnown RBP13.25□□□□□ -0.29
ATG4B-212ENST00000430617 ECE2O60344 883 aa13.24□□□□□ -0.29
ATG4B-212ENST00000430617 MYL6BP14649 208 aa13.24□□□□□ -0.29
ATG4B-212ENST00000430617 CAP1Q01518 475 aa13.24□□□□□ -0.29
ATG4B-212ENST00000430617 CHRDL2Q6WN34 429 aa13.24□□□□□ -0.29
ATG4B-212ENST00000430617 GIGYF2Q6Y7W6 1299 aaKnown RBP13.24□□□□□ -0.29
ATG4B-212ENST00000430617 PPP1R42Q7Z4L9 355 aa13.24□□□□□ -0.29
ATG4B-212ENST00000430617 RBM27Q9P2N5 1060 aaKnown RBP13.24□□□□□ -0.29
ATG4B-212ENST00000430617 PTPN22Q9Y2R2 807 aa13.24□□□□□ -0.29
ATG4B-212ENST00000430617 HCLS1P14317 486 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-212ENST00000430617 GRAPQ13588 217 aa13.23□□□□□ -0.29
ATG4B-212ENST00000430617 GRAPLQ8TC17 118 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-212ENST00000430617 ARMC5Q96C12 935 aa13.23□□□□□ -0.29
ATG4B-212ENST00000430617 POLLQ9UGP5 575 aa13.23□□□□□ -0.29
ATG4B-212ENST00000430617 VIL1P09327 827 aaKnown RBP13.22□□□□□ -0.29
ATG4B-212ENST00000430617 UTP14AQ9BVJ6 771 aaKnown RBP13.22□□□□□ -0.29
ATG4B-212ENST00000430617 ZNF609O15014 1411 aa13.22□□□□□ -0.29
ATG4B-212ENST00000430617 ECM29Q5VYK3 1845 aa13.21□□□□□ -0.29
ATG4B-212ENST00000430617 PRKAR2BP31323 418 aa13.21□□□□□ -0.29
ATG4B-212ENST00000430617 ZNF280AP59817 542 aaPredicted RBP13.21□□□□□ -0.29
ATG4B-212ENST00000430617 SREBF2Q12772 1141 aa13.21□□□□□ -0.29
ATG4B-212ENST00000430617 PARP10Q53GL7 1025 aa13.21□□□□□ -0.29
ATG4B-212ENST00000430617 DDX46Q7L014 1031 aaKnown RBP13.21□□□□□ -0.29
ATG4B-212ENST00000430617 PNISRQ8TF01 805 aaKnown RBP13.21□□□□□ -0.29
ATG4B-212ENST00000430617 NSFL1CQ9UNZ2 370 aaKnown RBP13.21□□□□□ -0.29
ATG4B-212ENST00000430617 PTPN12Q05209 780 aaKnown RBP13.2□□□□□ -0.3
ATG4B-212ENST00000430617 TTLL12Q14166 644 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-212ENST00000430617 CD99L2Q8TCZ2 262 aa13.2□□□□□ -0.3
ATG4B-212ENST00000430617 RSPH6AQ9H0K4 717 aa13.2□□□□□ -0.3
ATG4B-212ENST00000430617 PITPNM2Q9BZ72 1349 aa13.19□□□□□ -0.3
ATG4B-212ENST00000430617 SPEF2Q9C093 1822 aa13.19□□□□□ -0.3
ATG4B-212ENST00000430617 C6orf229H3BNL8 230 aa13.19□□□□□ -0.3
ATG4B-212ENST00000430617 GPSM2P81274 684 aa13.19□□□□□ -0.3
ATG4B-212ENST00000430617 OTOFQ9HC10 1997 aa13.19□□□□□ -0.3
ATG4B-212ENST00000430617 VCANP13611 3396 aa13.18□□□□□ -0.3
ATG4B-212ENST00000430617 ALPK3Q96L96 1907 aa13.18□□□□□ -0.3
ATG4B-212ENST00000430617 MNX1P50219 401 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-212ENST00000430617 SPRYD7Q5W111 196 aa13.18□□□□□ -0.3
ATG4B-212ENST00000430617 IFNL1Q8IU54 200 aa13.18□□□□□ -0.3
ATG4B-212ENST00000430617 RTF1Q92541 710 aaKnown RBP13.18□□□□□ -0.3
ATG4B-212ENST00000430617 CELF1Q92879 486 aaKnown RBP13.18□□□□□ -0.3
ATG4B-212ENST00000430617 ZNF428Q96B54 188 aa13.18□□□□□ -0.3
ATG4B-212ENST00000430617 ZNF333Q96JL9 665 aa13.18□□□□□ -0.3
ATG4B-212ENST00000430617 THUMPD2Q9BTF0 503 aaKnown RBP13.18□□□□□ -0.3
ATG4B-212ENST00000430617 TMEM106CQ9BVX2 250 aa13.18□□□□□ -0.3
ATG4B-212ENST00000430617 MYOZ2Q9NPC6 264 aa13.18□□□□□ -0.3
ATG4B-212ENST00000430617 IGF2BP3O00425 579 aaKnown RBP eCLIP13.17□□□□□ -0.3
ATG4B-212ENST00000430617 PRKG1Q13976 671 aa13.17□□□□□ -0.3
ATG4B-212ENST00000430617 TAF7Q15545 349 aaPredicted RBP13.17□□□□□ -0.3
ATG4B-212ENST00000430617 NBPF9Q3BBW0 867 aa13.17□□□□□ -0.3
ATG4B-212ENST00000430617 LRP10Q7Z4F1 713 aa13.17□□□□□ -0.3
ATG4B-212ENST00000430617 GMLQ99445 158 aa13.17□□□□□ -0.3
ATG4B-212ENST00000430617 PRO3102Q9H379 93 aa13.17□□□□□ -0.3
ATG4B-212ENST00000430617 FZD1Q9UP38 647 aa13.17□□□□□ -0.3
ATG4B-212ENST00000430617 ALDH1A1P00352 501 aa13.16□□□□□ -0.3
ATG4B-212ENST00000430617 RSBN1LQ6PCB5 846 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-212ENST00000430617 TMC4Q7Z404 712 aa13.16□□□□□ -0.3
ATG4B-212ENST00000430617 NLRP10Q86W26 655 aa13.16□□□□□ -0.3
ATG4B-212ENST00000430617 TBC1D16Q8TBP0 767 aa13.16□□□□□ -0.3
ATG4B-212ENST00000430617 ERO1AQ96HE7 468 aa13.16□□□□□ -0.3
ATG4B-212ENST00000430617 SOX1O00570 391 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-212ENST00000430617 MYCP01106 439 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-212ENST00000430617 EIF4A1P60842 406 aaKnown RBP13.15□□□□□ -0.3
ATG4B-212ENST00000430617 TCIRG1Q13488 830 aa13.15□□□□□ -0.3
ATG4B-212ENST00000430617 LDLRAD1Q5T700 205 aa13.15□□□□□ -0.3
ATG4B-212ENST00000430617 AGBL3Q8NEM8 1001 aa13.15□□□□□ -0.3
ATG4B-212ENST00000430617 EFCC1Q9HA90 598 aa13.15□□□□□ -0.3
ATG4B-212ENST00000430617 WTIPA6NIX2 430 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-212ENST00000430617 ANXA1P04083 346 aa13.14□□□□□ -0.31
ATG4B-212ENST00000430617 USP17L8P0C7I0 530 aa13.14□□□□□ -0.31
ATG4B-212ENST00000430617 CRHR2Q13324 411 aa13.14□□□□□ -0.31
ATG4B-212ENST00000430617 PDIA6Q15084 440 aa13.14□□□□□ -0.31
ATG4B-212ENST00000430617 FAM9BQ8IZU0 186 aa13.14□□□□□ -0.31
ATG4B-212ENST00000430617 EYA3Q99504 573 aa13.14□□□□□ -0.31
ATG4B-212ENST00000430617 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-212ENST00000430617 TRMT112Q9UI30 125 aaKnown RBP13.14□□□□□ -0.31
ATG4B-212ENST00000430617 PROSER3Q2NL68 480 aa13.13□□□□□ -0.31
ATG4B-212ENST00000430617 SLC4A8Q2Y0W8 1093 aa13.13□□□□□ -0.31
ATG4B-212ENST00000430617 LRCH3Q96II8 777 aa13.13□□□□□ -0.31
ATG4B-212ENST00000430617 CFAP53Q96M91 514 aa13.13□□□□□ -0.31
ATG4B-212ENST00000430617 YTHDC1Q96MU7 727 aaKnown RBP13.13□□□□□ -0.31
ATG4B-212ENST00000430617 PTCH2Q9Y6C5 1203 aa13.13□□□□□ -0.31
ATG4B-212ENST00000430617 SH3TC1Q8TE82 1336 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms