RNA–Protein interactions for RNA: ENST00000428549.8

ABCA8-202, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-202ENST00000428549 RSPH1Q8WYR4 309 aa10.73□□□□□ -0.69
ABCA8-202ENST00000428549 DDX27Q96GQ7 796 aaKnown RBP10.73□□□□□ -0.69
ABCA8-202ENST00000428549 NEUROD6Q96NK8 337 aa10.73□□□□□ -0.69
ABCA8-202ENST00000428549 GEMIN8Q9NWZ8 242 aaKnown RBP10.73□□□□□ -0.69
ABCA8-202ENST00000428549 KLF15Q9UIH9 416 aa10.73□□□□□ -0.69
ABCA8-202ENST00000428549 RCAN3Q9UKA8 241 aa10.73□□□□□ -0.69
ABCA8-202ENST00000428549 BRWD3Q6RI45 1802 aa10.73□□□□□ -0.69
ABCA8-202ENST00000428549 KAT6BQ8WYB5 2073 aa10.73□□□□□ -0.69
ABCA8-202ENST00000428549 RNF123Q5XPI4 1314 aa10.73□□□□□ -0.69
ABCA8-202ENST00000428549 FANCIQ9NVI1 1328 aa10.73□□□□□ -0.69
ABCA8-202ENST00000428549 DISP2A7MBM2 1401 aa10.73□□□□□ -0.69
ABCA8-202ENST00000428549 TMEM88BA6NKF7 163 aa10.73□□□□□ -0.69
ABCA8-202ENST00000428549 S100BP04271 92 aaPredicted RBP10.73□□□□□ -0.69
ABCA8-202ENST00000428549 ZNF853P0CG23 659 aa10.73□□□□□ -0.69
ABCA8-202ENST00000428549 DHX8Q14562 1220 aaKnown RBP10.73□□□□□ -0.69
ABCA8-202ENST00000428549 AKAP4Q5JQC9 854 aa10.73□□□□□ -0.69
ABCA8-202ENST00000428549 RNF187Q5TA31 235 aaPredicted RBP10.73□□□□□ -0.69
ABCA8-202ENST00000428549 FAM196AQ6ZSG2 479 aa10.73□□□□□ -0.69
ABCA8-202ENST00000428549 DHX38Q92620 1227 aaKnown RBP10.73□□□□□ -0.69
ABCA8-202ENST00000428549 UPF1Q92900 1129 aaKnown RBP eCLIP10.73□□□□□ -0.69
ABCA8-202ENST00000428549 AGBL1Q96MI9 1066 aa10.73□□□□□ -0.69
ABCA8-202ENST00000428549 PCDH12Q9NPG4 1184 aa10.73□□□□□ -0.69
ABCA8-202ENST00000428549 CWC25Q9NXE8 425 aaPredicted RBP10.73□□□□□ -0.69
ABCA8-202ENST00000428549 ADAMTS7Q9UKP4 1686 aa10.72□□□□□ -0.69
ABCA8-202ENST00000428549 PITPNM1O00562 1244 aa10.72□□□□□ -0.69
ABCA8-202ENST00000428549 CDC37Q16543 378 aaPredicted RBP10.72□□□□□ -0.69
ABCA8-202ENST00000428549 ZNF530Q6P9A1 599 aaPredicted RBP10.72□□□□□ -0.69
ABCA8-202ENST00000428549 RPUSD2Q8IZ73 545 aaKnown RBP10.72□□□□□ -0.69
ABCA8-202ENST00000428549 TMC2Q8TDI7 906 aa10.72□□□□□ -0.69
ABCA8-202ENST00000428549 RBM28Q9NW13 759 aaKnown RBP10.72□□□□□ -0.69
ABCA8-202ENST00000428549 SPG7Q9UQ90 795 aa10.72□□□□□ -0.69
ABCA8-202ENST00000428549 SSUH2Q9Y2M2 353 aa10.72□□□□□ -0.69
ABCA8-202ENST00000428549 SUPT16HQ9Y5B9 1047 aaKnown RBP10.72□□□□□ -0.69
ABCA8-202ENST00000428549 FLT3P36888 993 aa10.71□□□□□ -0.69
ABCA8-202ENST00000428549 AMHR2Q16671 573 aa10.71□□□□□ -0.69
ABCA8-202ENST00000428549 C1orf141Q5JVX7 400 aa10.71□□□□□ -0.69
ABCA8-202ENST00000428549 FAM182BQ5T319 152 aa10.71□□□□□ -0.69
ABCA8-202ENST00000428549 THUMPD2Q9BTF0 503 aaKnown RBP10.71□□□□□ -0.69
ABCA8-202ENST00000428549 SMC3Q9UQE7 1217 aa10.71□□□□□ -0.69
ABCA8-202ENST00000428549 CEMIPQ8WUJ3 1361 aa10.71□□□□□ -0.7
ABCA8-202ENST00000428549 PPP1R12AO14974 1030 aaPredicted RBP10.7□□□□□ -0.7
ABCA8-202ENST00000428549 SATB1Q01826 763 aa10.7□□□□□ -0.7
ABCA8-202ENST00000428549 POU5F1BQ06416 359 aa10.7□□□□□ -0.7
ABCA8-202ENST00000428549 DCTN1Q14203 1278 aa10.7□□□□□ -0.7
ABCA8-202ENST00000428549 ZSCAN30Q86W11 494 aa10.7□□□□□ -0.7
ABCA8-202ENST00000428549 BABAM1Q9NWV8 329 aa10.7□□□□□ -0.7
ABCA8-202ENST00000428549 WNK3Q9BYP7 1800 aa10.7□□□□□ -0.7
ABCA8-202ENST00000428549 UBE4AQ14139 1066 aa10.69□□□□□ -0.7
ABCA8-202ENST00000428549 MCM10Q7L590 875 aa10.69□□□□□ -0.7
ABCA8-202ENST00000428549 MARCH10Q8NA82 808 aaPredicted RBP10.69□□□□□ -0.7
ABCA8-202ENST00000428549 STAG1Q8WVM7 1258 aa10.69□□□□□ -0.7
ABCA8-202ENST00000428549 CHL1O00533 1208 aa10.69□□□□□ -0.7
ABCA8-202ENST00000428549 TERF1P54274 439 aa10.69□□□□□ -0.7
ABCA8-202ENST00000428549 BMS1Q14692 1282 aaKnown RBP10.69□□□□□ -0.7
ABCA8-202ENST00000428549 L1TD1Q5T7N2 865 aaKnown RBP10.69□□□□□ -0.7
ABCA8-202ENST00000428549 IL17REQ8NFR9 667 aa10.69□□□□□ -0.7
ABCA8-202ENST00000428549 SVIPQ8NHG7 77 aa10.69□□□□□ -0.7
ABCA8-202ENST00000428549 TSR2Q969E8 191 aaKnown RBP10.69□□□□□ -0.7
ABCA8-202ENST00000428549 DDX56Q9NY93 547 aaKnown RBP10.69□□□□□ -0.7
ABCA8-202ENST00000428549 ANAPC4Q9UJX5 808 aa10.69□□□□□ -0.7
ABCA8-202ENST00000428549 TBC1D2BQ9UPU7 963 aa10.69□□□□□ -0.7
ABCA8-202ENST00000428549 TNS2Q63HR2 1409 aa10.68□□□□□ -0.7
ABCA8-202ENST00000428549 FGAP02671 866 aa10.68□□□□□ -0.7
ABCA8-202ENST00000428549 LDHCP07864 332 aa10.68□□□□□ -0.7
ABCA8-202ENST00000428549 HSP90AB1P08238 724 aaKnown RBP10.68□□□□□ -0.7
ABCA8-202ENST00000428549 KCTD2Q14681 263 aa10.68□□□□□ -0.7
ABCA8-202ENST00000428549 MAPRE1Q15691 268 aaKnown RBP10.68□□□□□ -0.7
ABCA8-202ENST00000428549 IFNL2Q8IZJ0 200 aa10.68□□□□□ -0.7
ABCA8-202ENST00000428549 DDX54Q8TDD1 881 aaKnown RBP10.68□□□□□ -0.7
ABCA8-202ENST00000428549 PIK3R5Q8WYR1 880 aa10.68□□□□□ -0.7
ABCA8-202ENST00000428549 MBIPQ9NS73 344 aa10.68□□□□□ -0.7
ABCA8-202ENST00000428549 AKAP2Q9Y2D5 859 aa10.68□□□□□ -0.7
ABCA8-202ENST00000428549 VIRMAQ69YN4 1812 aaKnown RBP10.68□□□□□ -0.7
ABCA8-202ENST00000428549 PCDH11XQ9BZA7 1347 aa10.68□□□□□ -0.7
ABCA8-202ENST00000428549 PCDH11YQ9BZA8 1340 aa10.68□□□□□ -0.7
ABCA8-202ENST00000428549 SCN11AQ9UI33 1791 aa10.67□□□□□ -0.7
ABCA8-202ENST00000428549 POM121CA8CG34 1229 aa10.67□□□□□ -0.7
ABCA8-202ENST00000428549 RNMTO43148 476 aaKnown RBP10.67□□□□□ -0.7
ABCA8-202ENST00000428549 HMMRO75330 724 aa10.67□□□□□ -0.7
ABCA8-202ENST00000428549 COL6A1P12109 1028 aa10.67□□□□□ -0.7
ABCA8-202ENST00000428549 PHKG2P15735 406 aa10.67□□□□□ -0.7
ABCA8-202ENST00000428549 RRP1P56182 461 aaKnown RBP10.67□□□□□ -0.7
ABCA8-202ENST00000428549 EXOSC9Q06265 439 aaKnown RBP10.67□□□□□ -0.7
ABCA8-202ENST00000428549 TTC39BQ5VTQ0 682 aaPredicted RBP10.67□□□□□ -0.7
ABCA8-202ENST00000428549 PAIP2Q9BPZ3 127 aaKnown RBP10.67□□□□□ -0.7
ABCA8-202ENST00000428549 SHANK3Q9BYB0 1731 aa10.67□□□□□ -0.7
ABCA8-202ENST00000428549 LRRC27Q9C0I9 530 aa10.67□□□□□ -0.7
ABCA8-202ENST00000428549 ZHX3Q9H4I2 956 aa10.67□□□□□ -0.7
ABCA8-202ENST00000428549 CASS4Q9NQ75 786 aa10.67□□□□□ -0.7
ABCA8-202ENST00000428549 NOL7Q9UMY1 257 aaKnown RBP10.67□□□□□ -0.7
ABCA8-202ENST00000428549 MRC1P22897 1456 aa10.67□□□□□ -0.7
ABCA8-202ENST00000428549 IPO8O15397 1037 aaKnown RBP10.66□□□□□ -0.7
ABCA8-202ENST00000428549 TRIM37O94972 964 aa10.66□□□□□ -0.7
ABCA8-202ENST00000428549 MS4A1P11836 297 aa10.66□□□□□ -0.7
ABCA8-202ENST00000428549 TAF7Q15545 349 aaPredicted RBP10.66□□□□□ -0.7
ABCA8-202ENST00000428549 MUC3BQ9H195 1237 aa10.66□□□□□ -0.7
ABCA8-202ENST00000428549 ISY1Q9ULR0 285 aaKnown RBP10.66□□□□□ -0.7
ABCA8-202ENST00000428549 SIPA1L3O60292 1781 aaPredicted RBP10.66□□□□□ -0.7
ABCA8-202ENST00000428549 BCL9O00512 1426 aa10.66□□□□□ -0.7
ABCA8-202ENST00000428549 KDM6AO15550 1401 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms