RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 CFHR5Q9BXR6 569 aa19.1■□□□□ 0.65
PDE6D-203ENST00000428104 RANBP2P49792 3224 aaKnown RBP19.1■□□□□ 0.65
PDE6D-203ENST00000428104 LAMB2P55268 1798 aa19.09■□□□□ 0.65
PDE6D-203ENST00000428104 LRRC37AA6NMS7 1700 aa19.09■□□□□ 0.65
PDE6D-203ENST00000428104 TRIOBPQ9H2D6 2365 aa19.09■□□□□ 0.65
PDE6D-203ENST00000428104 SREBF2Q12772 1141 aa19.09■□□□□ 0.65
PDE6D-203ENST00000428104 TTLL12Q14166 644 aaPredicted RBP19.09■□□□□ 0.65
PDE6D-203ENST00000428104 ZNF428Q96B54 188 aa19.09■□□□□ 0.65
PDE6D-203ENST00000428104 TRMT112Q9UI30 125 aaKnown RBP19.09■□□□□ 0.65
PDE6D-203ENST00000428104 U2AF1L5P0DN76 240 aaPredicted RBP19.08■□□□□ 0.64
PDE6D-203ENST00000428104 U2AF1Q01081 240 aaKnown RBP eCLIP19.08■□□□□ 0.64
PDE6D-203ENST00000428104 LRP10Q7Z4F1 713 aa19.08■□□□□ 0.64
PDE6D-203ENST00000428104 CELF1Q92879 486 aaKnown RBP19.08■□□□□ 0.64
PDE6D-203ENST00000428104 EYA3Q99504 573 aa19.07■□□□□ 0.64
PDE6D-203ENST00000428104 TAF1P21675 1872 aa19.07■□□□□ 0.64
PDE6D-203ENST00000428104 ANKRD36CQ5JPF3 1778 aa19.06■□□□□ 0.64
PDE6D-203ENST00000428104 SH3TC1Q8TE82 1336 aa19.06■□□□□ 0.64
PDE6D-203ENST00000428104 PITPNM2Q9BZ72 1349 aa19.06■□□□□ 0.64
PDE6D-203ENST00000428104 ANXA1P04083 346 aa19.06■□□□□ 0.64
PDE6D-203ENST00000428104 PROSER3Q2NL68 480 aa19.06■□□□□ 0.64
PDE6D-203ENST00000428104 PNISRQ8TF01 805 aaKnown RBP19.06■□□□□ 0.64
PDE6D-203ENST00000428104 ERBB4Q15303 1308 aa19.05■□□□□ 0.64
PDE6D-203ENST00000428104 COL6A3P12111 3177 aa19.05■□□□□ 0.64
PDE6D-203ENST00000428104 PDIA6Q15084 440 aa19.05■□□□□ 0.64
PDE6D-203ENST00000428104 RSBN1LQ6PCB5 846 aaPredicted RBP19.05■□□□□ 0.64
PDE6D-203ENST00000428104 TBC1D16Q8TBP0 767 aa19.05■□□□□ 0.64
PDE6D-203ENST00000428104 CFAP53Q96M91 514 aa19.05■□□□□ 0.64
PDE6D-203ENST00000428104 MYOZ2Q9NPC6 264 aa19.05■□□□□ 0.64
PDE6D-203ENST00000428104 KIAA0100Q14667 2235 aaKnown RBP19.04■□□□□ 0.64
PDE6D-203ENST00000428104 CEP290O15078 2479 aa19.04■□□□□ 0.64
PDE6D-203ENST00000428104 PTPN12Q05209 780 aaKnown RBP19.04■□□□□ 0.64
PDE6D-203ENST00000428104 SLC17A8Q8NDX2 589 aa19.04■□□□□ 0.64
PDE6D-203ENST00000428104 AGBL3Q8NEM8 1001 aa19.04■□□□□ 0.64
PDE6D-203ENST00000428104 NUDCQ9Y266 331 aa19.04■□□□□ 0.64
PDE6D-203ENST00000428104 COL4A1P02462 1669 aa19.04■□□□□ 0.64
PDE6D-203ENST00000428104 KDM3BQ7LBC6 1761 aa19.04■□□□□ 0.64
PDE6D-203ENST00000428104 SCN9AQ15858 1988 aa19.03■□□□□ 0.64
PDE6D-203ENST00000428104 ARMC5Q96C12 935 aa19.03■□□□□ 0.64
PDE6D-203ENST00000428104 ZC3H12CQ9C0D7 883 aaKnown RBP19.03■□□□□ 0.64
PDE6D-203ENST00000428104 PTPN22Q9Y2R2 807 aa19.03■□□□□ 0.64
PDE6D-203ENST00000428104 CUL9Q8IWT3 2517 aa19.02■□□□□ 0.64
PDE6D-203ENST00000428104 G3V3G9 751 aa19.02■□□□□ 0.64
PDE6D-203ENST00000428104 H0YGN5 161 aa19.02■□□□□ 0.64
PDE6D-203ENST00000428104 USP17L8P0C7I0 530 aa19.02■□□□□ 0.64
PDE6D-203ENST00000428104 HSP90AB3PQ58FF7 597 aa19.02■□□□□ 0.64
PDE6D-203ENST00000428104 DCAF8Q5TAQ9 597 aa19.02■□□□□ 0.64
PDE6D-203ENST00000428104 OTUD5Q96G74 571 aa19.02■□□□□ 0.64
PDE6D-203ENST00000428104 GMLQ99445 158 aa19.02■□□□□ 0.64
PDE6D-203ENST00000428104 ZNF609O15014 1411 aa19.01■□□□□ 0.63
PDE6D-203ENST00000428104 DDX60Q8IY21 1712 aaKnown RBP19.01■□□□□ 0.63
PDE6D-203ENST00000428104 ALDH1A1P00352 501 aa19.01■□□□□ 0.63
PDE6D-203ENST00000428104 EIF2S2P20042 333 aaKnown RBP19.01■□□□□ 0.63
PDE6D-203ENST00000428104 TCIRG1Q13488 830 aa19.01■□□□□ 0.63
PDE6D-203ENST00000428104 PRKG1Q13976 671 aa19.01■□□□□ 0.63
PDE6D-203ENST00000428104 NBPF9Q3BBW0 867 aa19.01■□□□□ 0.63
PDE6D-203ENST00000428104 AIMP1Q12904 312 aaKnown RBP19■□□□□ 0.63
PDE6D-203ENST00000428104 SPRYD7Q5W111 196 aa19■□□□□ 0.63
PDE6D-203ENST00000428104 CD99L2Q8TCZ2 262 aa19■□□□□ 0.63
PDE6D-203ENST00000428104 RBBP6Q7Z6E9 1792 aaKnown RBP19■□□□□ 0.63
PDE6D-203ENST00000428104 UFL1O94874 794 aa18.99■□□□□ 0.63
PDE6D-203ENST00000428104 COPS6Q7L5N1 327 aa18.99■□□□□ 0.63
PDE6D-203ENST00000428104 XAGE3Q8WTP9 111 aa18.99■□□□□ 0.63
PDE6D-203ENST00000428104 NF2P35240 595 aa18.98■□□□□ 0.63
PDE6D-203ENST00000428104 SF3B3Q15393 1217 aaKnown RBP18.98■□□□□ 0.63
PDE6D-203ENST00000428104 CHRDL2Q6WN34 429 aa18.98■□□□□ 0.63
PDE6D-203ENST00000428104 IFNL1Q8IU54 200 aa18.98■□□□□ 0.63
PDE6D-203ENST00000428104 TMEM106CQ9BVX2 250 aa18.98■□□□□ 0.63
PDE6D-203ENST00000428104 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.98■□□□□ 0.63
PDE6D-203ENST00000428104 IGF2BP3O00425 579 aaKnown RBP eCLIP18.97■□□□□ 0.63
PDE6D-203ENST00000428104 CAP1Q01518 475 aa18.97■□□□□ 0.63
PDE6D-203ENST00000428104 ARMC9Q7Z3E5 817 aa18.97■□□□□ 0.63
PDE6D-203ENST00000428104 NECTIN2Q92692 538 aa18.97■□□□□ 0.63
PDE6D-203ENST00000428104 FAM89AQ96GI7 184 aa18.97■□□□□ 0.63
PDE6D-203ENST00000428104 ERO1AQ96HE7 468 aa18.97■□□□□ 0.63
PDE6D-203ENST00000428104 EFCC1Q9HA90 598 aa18.97■□□□□ 0.63
PDE6D-203ENST00000428104 RPS8P62241 208 aaKnown RBP18.96■□□□□ 0.63
PDE6D-203ENST00000428104 LDLRAD1Q5T700 205 aa18.96■□□□□ 0.63
PDE6D-203ENST00000428104 ZNF333Q96JL9 665 aa18.96■□□□□ 0.63
PDE6D-203ENST00000428104 PODXL2Q9NZ53 605 aa18.96■□□□□ 0.63
PDE6D-203ENST00000428104 ANKIB1Q9P2G1 1089 aa18.96■□□□□ 0.63
PDE6D-203ENST00000428104 FZD1Q9UP38 647 aa18.96■□□□□ 0.63
PDE6D-203ENST00000428104 MANSC4A6NHS7 340 aaPredicted RBP18.95■□□□□ 0.62
PDE6D-203ENST00000428104 RTL5Q5HYW3 569 aaPredicted RBP18.95■□□□□ 0.62
PDE6D-203ENST00000428104 RBM27Q9P2N5 1060 aaKnown RBP18.95■□□□□ 0.62
PDE6D-203ENST00000428104 GGA1Q9UJY5 639 aa18.95■□□□□ 0.62
PDE6D-203ENST00000428104 USP17L3A6NCW0 530 aa18.94■□□□□ 0.62
PDE6D-203ENST00000428104 USP17L4A6NCW7 530 aa18.94■□□□□ 0.62
PDE6D-203ENST00000428104 INHBEP58166 350 aa18.94■□□□□ 0.62
PDE6D-203ENST00000428104 USP17L1Q7RTZ2 530 aa18.94■□□□□ 0.62
PDE6D-203ENST00000428104 ANGEL1Q9UNK9 670 aaKnown RBP18.94■□□□□ 0.62
PDE6D-203ENST00000428104 WNT10BO00744 389 aa18.93■□□□□ 0.62
PDE6D-203ENST00000428104 SASH1O94885 1247 aa18.93■□□□□ 0.62
PDE6D-203ENST00000428104 CRHR2Q13324 411 aa18.93■□□□□ 0.62
PDE6D-203ENST00000428104 MXD3Q9BW11 206 aa18.93■□□□□ 0.62
PDE6D-203ENST00000428104 TSPYL4Q9UJ04 414 aa18.93■□□□□ 0.62
PDE6D-203ENST00000428104 MYCP01106 439 aaPredicted RBP18.92■□□□□ 0.62
PDE6D-203ENST00000428104 SLC4A8Q2Y0W8 1093 aa18.92■□□□□ 0.62
PDE6D-203ENST00000428104 SLC10A4Q96EP9 437 aa18.92■□□□□ 0.62
PDE6D-203ENST00000428104 CLMNQ96JQ2 1002 aa18.92■□□□□ 0.62
PDE6D-203ENST00000428104 SEC31BQ9NQW1 1179 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms