RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 GMPSP49915 693 aaPredicted RBP16.22■□□□□ 0.19
GPC1-204ENST00000426280 MINPP1Q9UNW1 487 aa16.22■□□□□ 0.19
GPC1-204ENST00000426280 ZBTB12Q9Y330 459 aaPredicted RBP16.22■□□□□ 0.19
GPC1-204ENST00000426280 CACNA1FO60840 1977 aa16.21■□□□□ 0.19
GPC1-204ENST00000426280 UFL1O94874 794 aa16.21■□□□□ 0.19
GPC1-204ENST00000426280 NBPF7P0C2Y1 421 aaPredicted RBP16.21■□□□□ 0.19
GPC1-204ENST00000426280 HSP90B1P14625 803 aaKnown RBP16.21■□□□□ 0.19
GPC1-204ENST00000426280 ITGA6P23229 1130 aa16.21■□□□□ 0.19
GPC1-204ENST00000426280 MAP1SQ66K74 1059 aaPredicted RBP16.21■□□□□ 0.19
GPC1-204ENST00000426280 CIAPIN1Q6FI81 312 aa16.21■□□□□ 0.19
GPC1-204ENST00000426280 RTL9Q8NET4 1388 aa16.21■□□□□ 0.19
GPC1-204ENST00000426280 SCN4AP35499 1836 aa16.21■□□□□ 0.19
GPC1-204ENST00000426280 ADAMTSL1Q8N6G6 1762 aa16.21■□□□□ 0.18
GPC1-204ENST00000426280 SNAP23O00161 211 aa16.2■□□□□ 0.18
GPC1-204ENST00000426280 HIRAP54198 1017 aaPredicted RBP16.2■□□□□ 0.18
GPC1-204ENST00000426280 TXNRD3Q86VQ6 643 aa16.2■□□□□ 0.18
GPC1-204ENST00000426280 LDHDQ86WU2 507 aa16.2■□□□□ 0.18
GPC1-204ENST00000426280 ZNF594Q96JF6 807 aaPredicted RBP16.2■□□□□ 0.18
GPC1-204ENST00000426280 BSDC1Q9NW68 430 aaPredicted RBP16.2■□□□□ 0.18
GPC1-204ENST00000426280 GPRC5DQ9NZD1 345 aa16.2■□□□□ 0.18
GPC1-204ENST00000426280 ANKIB1Q9P2G1 1089 aa16.2■□□□□ 0.18
GPC1-204ENST00000426280 CLEC11AQ9Y240 323 aa16.2■□□□□ 0.18
GPC1-204ENST00000426280 CEP350Q5VT06 3117 aa16.2■□□□□ 0.18
GPC1-204ENST00000426280 GRM8O00222 908 aa16.19■□□□□ 0.18
GPC1-204ENST00000426280 PSMD14O00487 310 aa16.19■□□□□ 0.18
GPC1-204ENST00000426280 ECE2O60344 883 aa16.19■□□□□ 0.18
GPC1-204ENST00000426280 LMBR1LQ6UX01 489 aa16.19■□□□□ 0.18
GPC1-204ENST00000426280 SUCLG2Q96I99 432 aa16.19■□□□□ 0.18
GPC1-204ENST00000426280 CDC5LQ99459 802 aaKnown RBP16.19■□□□□ 0.18
GPC1-204ENST00000426280 GGA1Q9UJY5 639 aa16.19■□□□□ 0.18
GPC1-204ENST00000426280 PASKQ96RG2 1323 aa16.19■□□□□ 0.18
GPC1-204ENST00000426280 SPEF2Q9C093 1822 aa16.18■□□□□ 0.18
GPC1-204ENST00000426280 ALDH1L1O75891 902 aa16.18■□□□□ 0.18
GPC1-204ENST00000426280 KLRK1P26718 216 aa16.18■□□□□ 0.18
GPC1-204ENST00000426280 SRCIN1Q9C0H9 1055 aa16.18■□□□□ 0.18
GPC1-204ENST00000426280 EGFRP00533 1210 aa16.17■□□□□ 0.18
GPC1-204ENST00000426280 DLK2Q6UY11 383 aa16.17■□□□□ 0.18
GPC1-204ENST00000426280 CNTROBQ8N137 903 aa16.17■□□□□ 0.18
GPC1-204ENST00000426280 HELBQ8NG08 1087 aaPredicted RBP16.17■□□□□ 0.18
GPC1-204ENST00000426280 ZC3H12CQ9C0D7 883 aaKnown RBP16.17■□□□□ 0.18
GPC1-204ENST00000426280 MYH3P11055 1940 aa16.17■□□□□ 0.18
GPC1-204ENST00000426280 XDHP47989 1333 aa16.17■□□□□ 0.18
GPC1-204ENST00000426280 SCN9AQ15858 1988 aa16.17■□□□□ 0.18
GPC1-204ENST00000426280 TAF5LO75529 589 aa16.16■□□□□ 0.18
GPC1-204ENST00000426280 ATP2B4P23634 1241 aa16.16■□□□□ 0.18
GPC1-204ENST00000426280 CCT4P50991 539 aaKnown RBP16.16■□□□□ 0.18
GPC1-204ENST00000426280 HNRNPUQ00839 825 aaKnown RBP eCLIP16.16■□□□□ 0.18
GPC1-204ENST00000426280 ALDH1L2Q3SY69 923 aa16.16■□□□□ 0.18
GPC1-204ENST00000426280 TRPM4Q8TD43 1214 aa16.16■□□□□ 0.18
GPC1-204ENST00000426280 EYA3Q99504 573 aa16.16■□□□□ 0.18
GPC1-204ENST00000426280 USP44Q9H0E7 712 aa16.16■□□□□ 0.18
GPC1-204ENST00000426280 C9orf78Q9NZ63 289 aaPredicted RBP16.16■□□□□ 0.18
GPC1-204ENST00000426280 CNOT7Q9UIV1 285 aaKnown RBP16.16■□□□□ 0.18
GPC1-204ENST00000426280 UTYO14607 1347 aa16.16■□□□□ 0.18
GPC1-204ENST00000426280 LMOD1P29536 600 aaPredicted RBP16.15■□□□□ 0.18
GPC1-204ENST00000426280 CHRNDQ07001 517 aa16.15■□□□□ 0.18
GPC1-204ENST00000426280 TNIP1Q15025 636 aa16.15■□□□□ 0.18
GPC1-204ENST00000426280 SAMD7Q7Z3H4 446 aa16.15■□□□□ 0.18
GPC1-204ENST00000426280 PNMA8AQ86V59 439 aaPredicted RBP16.15■□□□□ 0.18
GPC1-204ENST00000426280 KLRG1Q96E93 195 aa16.15■□□□□ 0.18
GPC1-204ENST00000426280 MXD3Q9BW11 206 aa16.15■□□□□ 0.18
GPC1-204ENST00000426280 SMC4Q9NTJ3 1288 aa16.15■□□□□ 0.18
GPC1-204ENST00000426280 NOB1Q9ULX3 412 aaKnown RBP16.15■□□□□ 0.18
GPC1-204ENST00000426280 TNNQ9UQP3 1299 aa16.15■□□□□ 0.18
GPC1-204ENST00000426280 CHMP3Q9Y3E7 222 aa16.15■□□□□ 0.18
GPC1-204ENST00000426280 ANKRD18BA2A2Z9 1011 aa16.14■□□□□ 0.17
GPC1-204ENST00000426280 TRAF5O00463 557 aa16.14■□□□□ 0.17
GPC1-204ENST00000426280 IGHMBP2P38935 993 aaKnown RBP16.14■□□□□ 0.17
GPC1-204ENST00000426280 RARSP54136 660 aaKnown RBP16.14■□□□□ 0.17
GPC1-204ENST00000426280 ANKRD44Q8N8A2 993 aa16.14■□□□□ 0.17
GPC1-204ENST00000426280 PUS3Q9BZE2 481 aaKnown RBP16.14■□□□□ 0.17
GPC1-204ENST00000426280 PTPRCP08575 1304 aa16.14■□□□□ 0.17
GPC1-204ENST00000426280 IRS2Q9Y4H2 1338 aa16.14■□□□□ 0.17
GPC1-204ENST00000426280 VIL1P09327 827 aaKnown RBP16.13■□□□□ 0.17
GPC1-204ENST00000426280 USP50Q70EL3 339 aaPredicted RBP16.13■□□□□ 0.17
GPC1-204ENST00000426280 MICALL2Q8IY33 904 aa16.13■□□□□ 0.17
GPC1-204ENST00000426280 ADARB2Q9NS39 739 aaKnown RBP16.13■□□□□ 0.17
GPC1-204ENST00000426280 IFIT5Q13325 482 aaKnown RBP16.12■□□□□ 0.17
GPC1-204ENST00000426280 RBM26Q5T8P6 1007 aaKnown RBP16.12■□□□□ 0.17
GPC1-204ENST00000426280 MPHOSPH8Q99549 860 aa16.12■□□□□ 0.17
GPC1-204ENST00000426280 BICC1Q9H694 974 aaKnown RBP16.12■□□□□ 0.17
GPC1-204ENST00000426280 PGAP2Q9UHJ9 254 aa16.12■□□□□ 0.17
GPC1-204ENST00000426280 ASTN2O75129 1339 aaPredicted RBP16.12■□□□□ 0.17
GPC1-204ENST00000426280 BCAR3O75815 825 aa16.11■□□□□ 0.17
GPC1-204ENST00000426280 TBC1D10BQ4KMP7 808 aaPredicted RBP16.11■□□□□ 0.17
GPC1-204ENST00000426280 KLHDC4Q8TBB5 520 aa16.11■□□□□ 0.17
GPC1-204ENST00000426280 DPF2Q92785 391 aa16.11■□□□□ 0.17
GPC1-204ENST00000426280 GMLQ99445 158 aa16.11■□□□□ 0.17
GPC1-204ENST00000426280 GLIS2Q9BZE0 524 aaPredicted RBP16.11■□□□□ 0.17
GPC1-204ENST00000426280 MKRN1Q9UHC7 482 aaKnown RBP16.11■□□□□ 0.17
GPC1-204ENST00000426280 ZNF804BA4D1E1 1349 aa16.11■□□□□ 0.17
GPC1-204ENST00000426280 PLIN1O60240 522 aa16.1■□□□□ 0.17
GPC1-204ENST00000426280 BRPF1P55201 1214 aaPredicted RBP16.1■□□□□ 0.17
GPC1-204ENST00000426280 RABL6Q3YEC7 729 aaPredicted RBP16.1■□□□□ 0.17
GPC1-204ENST00000426280 CST9Q5W186 159 aa16.1■□□□□ 0.17
GPC1-204ENST00000426280 CREBZFQ9NS37 354 aa16.1■□□□□ 0.17
GPC1-204ENST00000426280 LEMD3Q9Y2U8 911 aa16.1■□□□□ 0.17
GPC1-204ENST00000426280 MED23Q9ULK4 1368 aa16.1■□□□□ 0.17
GPC1-204ENST00000426280 G3V3G9 751 aa16.09■□□□□ 0.17
GPC1-204ENST00000426280 CT47B1P0C2W7 299 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms