RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 ITGA6P23229 1130 aa10.07□□□□□ -0.8
HMGB1P32-201ENST00000425971 TARSP26639 723 aaKnown RBP10.07□□□□□ -0.8
HMGB1P32-201ENST00000425971 FANCCQ00597 558 aa10.07□□□□□ -0.8
HMGB1P32-201ENST00000425971 GRIN2CQ14957 1233 aa10.07□□□□□ -0.8
HMGB1P32-201ENST00000425971 OR13H1Q8NG92 308 aa10.07□□□□□ -0.8
HMGB1P32-201ENST00000425971 ABHD17AQ96GS6 310 aa10.07□□□□□ -0.8
HMGB1P32-201ENST00000425971 NLRP2Q9NX02 1062 aa10.07□□□□□ -0.8
HMGB1P32-201ENST00000425971 MARK1Q9P0L2 795 aa10.07□□□□□ -0.8
HMGB1P32-201ENST00000425971 ZFATQ9P243 1243 aa10.07□□□□□ -0.8
HMGB1P32-201ENST00000425971 GMPR2Q9P2T1 348 aaKnown RBP10.07□□□□□ -0.8
HMGB1P32-201ENST00000425971 KRT25Q7Z3Z0 450 aa10.06□□□□□ -0.8
HMGB1P32-201ENST00000425971 SUV39H2Q9H5I1 410 aa10.06□□□□□ -0.8
HMGB1P32-201ENST00000425971 EFCC1Q9HA90 598 aa10.06□□□□□ -0.8
HMGB1P32-201ENST00000425971 LMTK3Q96Q04 1460 aa10.05□□□□□ -0.8
HMGB1P32-201ENST00000425971 IGSF3O75054 1194 aa10.05□□□□□ -0.8
HMGB1P32-201ENST00000425971 HOXD8P13378 290 aaPredicted RBP10.05□□□□□ -0.8
HMGB1P32-201ENST00000425971 SPEM2Q0P670 501 aa10.05□□□□□ -0.8
HMGB1P32-201ENST00000425971 KIAA0319Q5VV43 1072 aa10.05□□□□□ -0.8
HMGB1P32-201ENST00000425971 SRCIN1Q9C0H9 1055 aa10.05□□□□□ -0.8
HMGB1P32-201ENST00000425971 ATXN7L1Q9ULK2 861 aaPredicted RBP10.05□□□□□ -0.8
HMGB1P32-201ENST00000425971 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.05□□□□□ -0.8
HMGB1P32-201ENST00000425971 RARAP10276 462 aa10.04□□□□□ -0.8
HMGB1P32-201ENST00000425971 NFKB1P19838 968 aa10.04□□□□□ -0.8
HMGB1P32-201ENST00000425971 ERCC5P28715 1186 aaPredicted RBP10.04□□□□□ -0.8
HMGB1P32-201ENST00000425971 SOX18P35713 384 aa10.04□□□□□ -0.8
HMGB1P32-201ENST00000425971 RAD51AP2Q09MP3 1159 aa10.04□□□□□ -0.8
HMGB1P32-201ENST00000425971 SLC30A3Q99726 388 aa10.04□□□□□ -0.8
HMGB1P32-201ENST00000425971 BCO2Q9BYV7 579 aa10.04□□□□□ -0.8
HMGB1P32-201ENST00000425971 KANSL3Q9P2N6 904 aa10.04□□□□□ -0.8
HMGB1P32-201ENST00000425971 FAM8A1Q9UBU6 413 aa10.04□□□□□ -0.8
HMGB1P32-201ENST00000425971 SALL4Q9UJQ4 1053 aa10.04□□□□□ -0.8
HMGB1P32-201ENST00000425971 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.04□□□□□ -0.8
HMGB1P32-201ENST00000425971 EIF4G3O43432 1585 aaKnown RBP10.03□□□□□ -0.8
HMGB1P32-201ENST00000425971 KIF4AO95239 1232 aa10.03□□□□□ -0.8
HMGB1P32-201ENST00000425971 MAP3K6O95382 1288 aa10.03□□□□□ -0.8
HMGB1P32-201ENST00000425971 SNRPBP14678 240 aaKnown RBP10.03□□□□□ -0.8
HMGB1P32-201ENST00000425971 CD33P20138 364 aa10.03□□□□□ -0.8
HMGB1P32-201ENST00000425971 ZNF76P36508 570 aa10.03□□□□□ -0.8
HMGB1P32-201ENST00000425971 ZC3H6P61129 1189 aaKnown RBP10.03□□□□□ -0.8
HMGB1P32-201ENST00000425971 FAM182BQ5T319 152 aa10.03□□□□□ -0.8
HMGB1P32-201ENST00000425971 PEAR1Q5VY43 1037 aaPredicted RBP10.03□□□□□ -0.8
HMGB1P32-201ENST00000425971 C9orf131Q5VYM1 1079 aa10.03□□□□□ -0.8
HMGB1P32-201ENST00000425971 RNF34Q969K3 372 aa10.03□□□□□ -0.8
HMGB1P32-201ENST00000425971 GTPBP3Q969Y2 492 aaKnown RBP10.03□□□□□ -0.8
HMGB1P32-201ENST00000425971 TLR7Q9NYK1 1049 aaKnown RBP10.03□□□□□ -0.8
HMGB1P32-201ENST00000425971 A0A1W2PP55 124 aa10.02□□□□□ -0.81
HMGB1P32-201ENST00000425971 PHF20L1A8MW92 1017 aa10.02□□□□□ -0.81
HMGB1P32-201ENST00000425971 C11orf95C9JLR9 678 aaPredicted RBP10.02□□□□□ -0.81
HMGB1P32-201ENST00000425971 EDN3P14138 238 aa10.02□□□□□ -0.81
HMGB1P32-201ENST00000425971 GRM2Q14416 872 aa10.02□□□□□ -0.81
HMGB1P32-201ENST00000425971 NXPE4Q6UWF7 544 aa10.02□□□□□ -0.81
HMGB1P32-201ENST00000425971 NT5DC4Q86YG4 428 aa10.02□□□□□ -0.81
HMGB1P32-201ENST00000425971 PNMA5Q96PV4 448 aa10.02□□□□□ -0.81
HMGB1P32-201ENST00000425971 LATS2Q9NRM7 1088 aa10.02□□□□□ -0.81
HMGB1P32-201ENST00000425971 ERCC6L2Q5T890 1561 aa10.01□□□□□ -0.81
HMGB1P32-201ENST00000425971 GADD45BO75293 160 aaPredicted RBP10.01□□□□□ -0.81
HMGB1P32-201ENST00000425971 USP17L7P0C7H9 530 aa10.01□□□□□ -0.81
HMGB1P32-201ENST00000425971 FGFR3P22607 806 aa10.01□□□□□ -0.81
HMGB1P32-201ENST00000425971 GLIS3Q8NEA6 775 aa10.01□□□□□ -0.81
HMGB1P32-201ENST00000425971 FBXO41Q8TF61 875 aa10.01□□□□□ -0.81
HMGB1P32-201ENST00000425971 PHF24Q9UPV7 400 aa10.01□□□□□ -0.81
HMGB1P32-201ENST00000425971 IFT140Q96RY7 1462 aa10.01□□□□□ -0.81
HMGB1P32-201ENST00000425971 USP31Q70CQ4 1352 aa10.01□□□□□ -0.81
HMGB1P32-201ENST00000425971 PSAPP07602 524 aa10□□□□□ -0.81
HMGB1P32-201ENST00000425971 COL13A1Q5TAT6 717 aaPredicted RBP10□□□□□ -0.81
HMGB1P32-201ENST00000425971 BHMTQ93088 406 aa10□□□□□ -0.81
HMGB1P32-201ENST00000425971 PPFIA3O75145 1194 aa9.99□□□□□ -0.81
HMGB1P32-201ENST00000425971 ST13P50502 369 aaKnown RBP9.99□□□□□ -0.81
HMGB1P32-201ENST00000425971 PTPN12Q05209 780 aaKnown RBP9.99□□□□□ -0.81
HMGB1P32-201ENST00000425971 MEI1Q5TIA1 1274 aa9.99□□□□□ -0.81
HMGB1P32-201ENST00000425971 PRPF40BQ6NWY9 871 aaKnown RBP9.99□□□□□ -0.81
HMGB1P32-201ENST00000425971 HECW2Q9P2P5 1572 aa9.99□□□□□ -0.81
HMGB1P32-201ENST00000425971 CLASP1Q7Z460 1538 aa9.98□□□□□ -0.81
HMGB1P32-201ENST00000425971 DHX32Q7L7V1 743 aaKnown RBP9.98□□□□□ -0.81
HMGB1P32-201ENST00000425971 RAB44Q7Z6P3 723 aaPredicted RBP9.98□□□□□ -0.81
HMGB1P32-201ENST00000425971 CNTNAP3BQ96NU0 1288 aa9.98□□□□□ -0.81
HMGB1P32-201ENST00000425971 CNTNAP3Q9BZ76 1288 aa9.98□□□□□ -0.81
HMGB1P32-201ENST00000425971 TGIF2Q9GZN2 237 aa9.98□□□□□ -0.81
HMGB1P32-201ENST00000425971 TRAK1Q9UPV9 953 aa9.98□□□□□ -0.81
HMGB1P32-201ENST00000425971 NRLP54845 237 aa9.97□□□□□ -0.81
HMGB1P32-201ENST00000425971 PLAURQ03405 335 aa9.97□□□□□ -0.81
HMGB1P32-201ENST00000425971 HYAL2Q12891 473 aa9.97□□□□□ -0.81
HMGB1P32-201ENST00000425971 TAF1CQ15572 869 aaPredicted RBP9.97□□□□□ -0.81
HMGB1P32-201ENST00000425971 ILDR2Q71H61 639 aa9.97□□□□□ -0.81
HMGB1P32-201ENST00000425971 C3orf58Q8NDZ4 430 aa9.97□□□□□ -0.81
HMGB1P32-201ENST00000425971 EHD4Q9H223 541 aa9.97□□□□□ -0.81
HMGB1P32-201ENST00000425971 ACPPP15309 386 aa9.96□□□□□ -0.82
HMGB1P32-201ENST00000425971 GSTT1P30711 240 aa9.96□□□□□ -0.82
HMGB1P32-201ENST00000425971 GPLD1P80108 840 aa9.96□□□□□ -0.82
HMGB1P32-201ENST00000425971 CTBSQ01459 385 aa9.96□□□□□ -0.82
HMGB1P32-201ENST00000425971 NAALADL2Q58DX5 795 aa9.96□□□□□ -0.82
HMGB1P32-201ENST00000425971 NANOS1Q8WY41 292 aaKnown RBP9.96□□□□□ -0.82
HMGB1P32-201ENST00000425971 TRERF1Q96PN7 1200 aa9.96□□□□□ -0.82
HMGB1P32-201ENST00000425971 TCF12Q99081 682 aa9.96□□□□□ -0.82
HMGB1P32-201ENST00000425971 CDC14CA4D256 554 aa9.95□□□□□ -0.82
HMGB1P32-201ENST00000425971 GPR25O00155 361 aa9.95□□□□□ -0.82
HMGB1P32-201ENST00000425971 NEUROD1Q13562 356 aa9.95□□□□□ -0.82
HMGB1P32-201ENST00000425971 VWA5B2Q8N398 1253 aa9.95□□□□□ -0.82
HMGB1P32-201ENST00000425971 CEP120Q8N960 986 aa9.95□□□□□ -0.82
HMGB1P32-201ENST00000425971 TRPM4Q8TD43 1214 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms