RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 MED23Q9ULK4 1368 aa31.99■■■□□ 2.71
LDB1-202ENST00000425280 CCDC152Q4G0S7 254 aa31.99■■■□□ 2.71
LDB1-202ENST00000425280 TBC1D9BQ66K14 1250 aa31.99■■■□□ 2.71
LDB1-202ENST00000425280 RTL9Q8NET4 1388 aa31.99■■■□□ 2.71
LDB1-202ENST00000425280 CCDC158Q5M9N0 1113 aa31.98■■■□□ 2.71
LDB1-202ENST00000425280 GORABQ5T7V8 394 aa31.98■■■□□ 2.71
LDB1-202ENST00000425280 KRT27Q7Z3Y8 459 aa31.98■■■□□ 2.71
LDB1-202ENST00000425280 SEC31BQ9NQW1 1179 aa31.98■■■□□ 2.71
LDB1-202ENST00000425280 GOLIM4O00461 696 aa31.98■■■□□ 2.71
LDB1-202ENST00000425280 CHMP5Q9NZZ3 219 aa31.98■■■□□ 2.71
LDB1-202ENST00000425280 SNX14Q9Y5W7 946 aa31.98■■■□□ 2.71
LDB1-202ENST00000425280 FAM196AQ6ZSG2 479 aa31.97■■■□□ 2.71
LDB1-202ENST00000425280 ERFEQ4G0M1 354 aa31.96■■■□□ 2.71
LDB1-202ENST00000425280 TTC39AQ5SRH9 613 aa31.96■■■□□ 2.71
LDB1-202ENST00000425280 BICDL1Q6ZP65 573 aa31.96■■■□□ 2.71
LDB1-202ENST00000425280 SPEF2Q9C093 1822 aa31.96■■■□□ 2.71
LDB1-202ENST00000425280 ZPR1O75312 459 aa31.96■■■□□ 2.71
LDB1-202ENST00000425280 PDE8BO95263 885 aa31.96■■■□□ 2.71
LDB1-202ENST00000425280 HSP90AA1P07900 732 aaKnown RBP31.96■■■□□ 2.71
LDB1-202ENST00000425280 RASEFQ8IZ41 740 aa31.95■■■□□ 2.71
LDB1-202ENST00000425280 ARHGEF1Q92888 912 aaKnown RBP31.95■■■□□ 2.71
LDB1-202ENST00000425280 LRRC4BQ9NT99 713 aa31.95■■■□□ 2.71
LDB1-202ENST00000425280 MROH5Q6ZUA9 1318 aa31.95■■■□□ 2.7
LDB1-202ENST00000425280 ZNF589Q86UQ0 364 aaPredicted RBP31.95■■■□□ 2.7
LDB1-202ENST00000425280 MAP4K1Q92918 833 aa31.94■■■□□ 2.7
LDB1-202ENST00000425280 ABCC12Q96J65 1359 aa31.94■■■□□ 2.7
LDB1-202ENST00000425280 CHGBP05060 677 aa31.93■■■□□ 2.7
LDB1-202ENST00000425280 FOXD4L1Q9NU39 408 aa31.93■■■□□ 2.7
LDB1-202ENST00000425280 TICAM2Q86XR7 235 aa31.93■■■□□ 2.7
LDB1-202ENST00000425280 KCNB2Q92953 911 aa31.93■■■□□ 2.7
LDB1-202ENST00000425280 COL24A1Q17RW2 1714 aa31.92■■■□□ 2.7
LDB1-202ENST00000425280 MPHOSPH8Q99549 860 aa31.92■■■□□ 2.7
LDB1-202ENST00000425280 C4AP0C0L4 1744 aa31.92■■■□□ 2.7
LDB1-202ENST00000425280 NECTIN1Q15223 517 aa31.91■■■□□ 2.7
LDB1-202ENST00000425280 UPF3BQ9BZI7 483 aaKnown RBP31.91■■■□□ 2.7
LDB1-202ENST00000425280 RBM8AQ9Y5S9 174 aaKnown RBP31.91■■■□□ 2.7
LDB1-202ENST00000425280 PRPF40BQ6NWY9 871 aaKnown RBP31.91■■■□□ 2.7
LDB1-202ENST00000425280 C3orf67Q6ZVT6 689 aa31.9■■■□□ 2.7
LDB1-202ENST00000425280 SETDB2Q96T68 719 aa31.9■■■□□ 2.7
LDB1-202ENST00000425280 MCM2P49736 904 aa31.9■■■□□ 2.7
LDB1-202ENST00000425280 SCARF1Q14162 830 aa31.9■■■□□ 2.7
LDB1-202ENST00000425280 HELBQ8NG08 1087 aaPredicted RBP31.9■■■□□ 2.7
LDB1-202ENST00000425280 CASZ1Q86V15 1759 aa31.89■■■□□ 2.7
LDB1-202ENST00000425280 TAF5LO75529 589 aa31.89■■■□□ 2.7
LDB1-202ENST00000425280 FGFR2P21802 821 aa31.89■■■□□ 2.7
LDB1-202ENST00000425280 IGHMBP2P38935 993 aaKnown RBP31.89■■■□□ 2.7
LDB1-202ENST00000425280 PUM3Q15397 648 aaKnown RBP31.89■■■□□ 2.7
LDB1-202ENST00000425280 SLC10A5Q5PT55 438 aa31.89■■■□□ 2.7
LDB1-202ENST00000425280 CIZ1Q9ULV3 898 aaPredicted RBP31.89■■■□□ 2.7
LDB1-202ENST00000425280 FRAT2O75474 233 aaPredicted RBP31.88■■■□□ 2.69
LDB1-202ENST00000425280 TRIM37O94972 964 aa31.88■■■□□ 2.69
LDB1-202ENST00000425280 FKBP4Q02790 459 aaKnown RBP eCLIP31.88■■■□□ 2.69
LDB1-202ENST00000425280 SF3B3Q15393 1217 aaKnown RBP31.88■■■□□ 2.69
LDB1-202ENST00000425280 MCMDC2Q4G0Z9 681 aa31.88■■■□□ 2.69
LDB1-202ENST00000425280 TRAPPC3LQ5T215 181 aa31.88■■■□□ 2.69
LDB1-202ENST00000425280 IL27Q8NEV9 243 aa31.88■■■□□ 2.69
LDB1-202ENST00000425280 SEC62Q99442 399 aaKnown RBP31.88■■■□□ 2.69
LDB1-202ENST00000425280 NYXQ9GZU5 481 aa31.88■■■□□ 2.69
LDB1-202ENST00000425280 PHF14O94880 888 aa31.88■■■□□ 2.69
LDB1-202ENST00000425280 COL4A1P02462 1669 aa31.88■■■□□ 2.69
LDB1-202ENST00000425280 ARAP2Q8WZ64 1704 aa31.87■■■□□ 2.69
LDB1-202ENST00000425280 LPIN2Q92539 896 aa31.87■■■□□ 2.69
LDB1-202ENST00000425280 GTF2E1P29083 439 aaPredicted RBP31.87■■■□□ 2.69
LDB1-202ENST00000425280 RFC4P35249 363 aa31.87■■■□□ 2.69
LDB1-202ENST00000425280 KCNJ4P48050 445 aa31.87■■■□□ 2.69
LDB1-202ENST00000425280 CREB3L3Q68CJ9 461 aa31.87■■■□□ 2.69
LDB1-202ENST00000425280 ZNF772Q68DY9 489 aaPredicted RBP31.87■■■□□ 2.69
LDB1-202ENST00000425280 ZNF512BQ96KM6 892 aaPredicted RBP31.87■■■□□ 2.69
LDB1-202ENST00000425280 RBM6P78332 1123 aaKnown RBP31.86■■■□□ 2.69
LDB1-202ENST00000425280 CCDC129Q6ZRS4 1044 aa31.85■■■□□ 2.69
LDB1-202ENST00000425280 NBPF5PQ86XG9 351 aaPredicted RBP31.85■■■□□ 2.69
LDB1-202ENST00000425280 CDC5LQ99459 802 aaKnown RBP31.85■■■□□ 2.69
LDB1-202ENST00000425280 ZAP70P43403 619 aa31.85■■■□□ 2.69
LDB1-202ENST00000425280 SLFNL1Q499Z3 407 aa31.85■■■□□ 2.69
LDB1-202ENST00000425280 ZMYM1Q5SVZ6 1142 aa31.85■■■□□ 2.69
LDB1-202ENST00000425280 HELLSQ9NRZ9 838 aa31.85■■■□□ 2.69
LDB1-202ENST00000425280 AKAP11Q9UKA4 1901 aa31.85■■■□□ 2.69
LDB1-202ENST00000425280 RNF113AO15541 343 aaKnown RBP31.84■■■□□ 2.69
LDB1-202ENST00000425280 MCAMP43121 646 aa31.84■■■□□ 2.69
LDB1-202ENST00000425280 SLC27A3Q5K4L6 730 aa31.84■■■□□ 2.69
LDB1-202ENST00000425280 SLC27A2O14975 620 aa31.84■■■□□ 2.69
LDB1-202ENST00000425280 PI16Q6UXB8 463 aa31.84■■■□□ 2.69
LDB1-202ENST00000425280 TMX3Q96JJ7 454 aa31.84■■■□□ 2.69
LDB1-202ENST00000425280 SSFA2P28290 1259 aa31.83■■■□□ 2.69
LDB1-202ENST00000425280 UBR3Q6ZT12 1888 aa31.83■■■□□ 2.69
LDB1-202ENST00000425280 SLC5A1P13866 664 aa31.82■■■□□ 2.68
LDB1-202ENST00000425280 ZKSCAN1P17029 563 aaPredicted RBP31.82■■■□□ 2.68
LDB1-202ENST00000425280 ADCK5Q3MIX3 580 aa31.82■■■□□ 2.68
LDB1-202ENST00000425280 CCDC102BQ68D86 513 aa31.82■■■□□ 2.68
LDB1-202ENST00000425280 TTC14Q96N46 770 aa31.82■■■□□ 2.68
LDB1-202ENST00000425280 ADRA2BP18089 450 aa31.82■■■□□ 2.68
LDB1-202ENST00000425280 PHKA1P46020 1223 aa31.82■■■□□ 2.68
LDB1-202ENST00000425280 TM6SF1Q9BZW5 370 aa31.82■■■□□ 2.68
LDB1-202ENST00000425280 TPTE2Q6XPS3 522 aa31.81■■■□□ 2.68
LDB1-202ENST00000425280 SNAP23O00161 211 aa31.8■■■□□ 2.68
LDB1-202ENST00000425280 CASTP20810 708 aaKnown RBP31.8■■■□□ 2.68
LDB1-202ENST00000425280 ARID4AP29374 1257 aaPredicted RBP31.8■■■□□ 2.68
LDB1-202ENST00000425280 JAKMIP1Q96N16 626 aaKnown RBP31.8■■■□□ 2.68
LDB1-202ENST00000425280 EP400Q96L91 3159 aa31.8■■■□□ 2.68
LDB1-202ENST00000425280 CHRNDQ07001 517 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms